Nucleotide Global Alignment
Description
- Query:
- TRCN0000468488
- Subject:
- XM_017000081.1
- Aligned Length:
- 2937
- Identities:
- 1361
- Gaps:
- 1497
Alignment
Query 1 ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCACTTCCCCATACTCAGGCCGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCACTTCCCCATACTCAGGCCGC 74
Query 75 CTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGGGCC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGGGCC 148
Query 149 TGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTA 222
Query 223 GTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAACAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAACAA 296
Query 297 GTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACT 370
Query 371 ATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGC 444
Query 445 CGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGATGC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGATGC 518
Query 519 CACCCAGTCCAACGTGGCCATCTTTGCAGAGGGCAGCCTGTACTCAGCCACAGCTGCGGATTTCCAGGCCAGTG 592
|||||||||||||||||||||||||||
Sbjct 519 CACCCAGTCCAACGTGGCCATCTTTGC----------------------------------------------- 545
Query 593 ATGCTGTAGTTTACAGAAGCCTTGGGCCCCAGCCCCCACTCCGCTCCGCCAAGTATGACTCCAAGTGGCTCCGA 666
|
Sbjct 546 -------------------------------------------------------------------------A 546
Query 667 GAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 GAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGA 620
Query 741 TGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTCGGG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 621 TGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTCGGG 694
Query 815 CCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTCTAT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 695 CCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTCTAT 768
Query 889 TTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCACCAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 TTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCACCAC 842
Query 963 CCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTTCTACCTGGATGAGATTGAGCGTGGGTTTGAGGGCA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 CCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTTCTACCTGGATGAGATTGAGCGTGGGTTTGAGGGCA 916
Query 1037 AGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGGCCA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 917 AGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGGCCA 990
Query 1111 GGATCCTG---------------------------------------------CCCTG---------------- 1123
|||||||| |||||
Sbjct 991 GGATCCTGTGCAGGAGTAGGGGGAGCTGCCTTGTTCTCCTCTTCCCGAGACCTCCCTGATGATGTCCTGACCTT 1064
Query 1124 ----------------------------------------------------------CTCACTC--------- 1130
|||||||
Sbjct 1065 CATCAAGGCTCACCCGCTGCTGGACCCCGCTGTACCACCTGTCACCCATCAGCCTCTACTCACTCTCACTAGCA 1138
Query 1131 ----------GA---------------------------GTCCCCTC--------------------------- 1140
|| ||||||.|
Sbjct 1139 GGGCCCTACTGACCCAAGTAGCTGTGGATGGCATGGCTGGTCCCCACAGTAACATCACAGTCATGTTCCTTGGC 1212
Query 1141 ---------GGG----------AGGTCC---CTCCAGGT-----ACTCCGGGGGTCCCGGGAAGC---ACCTCC 1184
||| ||||.| |.|||||| | ||||||||.||.| ||| .|||||
Sbjct 1213 TCCAATGATGGGACAGTGCTGAAGGTGCTGACCCCAGGTGGGCGA-TCCGGGGGACCTG---AGCCCATCCTCC 1282
Query 1185 TGTA-------------------CCTG------------------GGCCGGCCC-------------------- 1201
||.| |||| ||.|.||||
Sbjct 1283 TGGAAGAGATTGATGCCTACAGCCCTGCCCGGTGCAGTGGGAAGCGGACAGCCCAAACAGCACGACGGATCATA 1356
Query 1202 ------------------GAGGG------------------------------------CTACC---------- 1211
||||| |||||
Sbjct 1357 GGGCTGGAGCTGGACACTGAGGGTCACAGGCTTTTTGTGGCTTTTTCTGGCTGTATTGTCTACCTCCCTCTCAG 1430
Query 1212 ----------------GGGGCC-------------------------------------------------GCG 1220
|||||| ||.
Sbjct 1431 CCGGTGTGCCCGGCATGGGGCCTGTCAGAGGAGCTGTTTGGCTTCTCAGGACCCATACTGTGGATGGCATAGCT 1504
Query 1221 CC-----CTG-------AAAAGGG----TG--------GACGTCGAGAAGCC------CCAGTTGTCCCTGAAG 1264
|| ||| |..|||| || ||.||.||..||.| ||||...|||.||.||
Sbjct 1505 CCAGGGGCTGTGTGGATATCAGGGGATCTGGTGGGACTGATGTGGATCAGGCTGGGAACCAGGAATCCATGGAG 1578
Query 1265 C-------CTCCC---------CT----------CGTCGGGCCC-----------------TCCTCCCG---CC 1292
| ||.|| || .|||.||||| |.||.||| ||
Sbjct 1579 CATGGTGACTGCCAAGATGGAGCTACTGGGAGTCAGTCTGGCCCTGGGGATTCTGCTTATGTGCTTCCGGGTCC 1652
Query 1293 AGGCC------------------GTC------------CCGAACGGCGGCC---GT-TTCAACTTTTAAAG--- 1329
.|||| ||| ||.|.|..||||| || |||.|||.||..||
Sbjct 1653 TGGCCCTTCCCCTGGGACCCCCAGTCCTCCCAGTGATGCCCACCCCCGGCCCCAGTCTTCCACTCTTGGAGTTC 1726
Query 1330 ------GGAGCGGTCCACG------GCCTCCAGCGTGGGGAGCGCCCG---------------AGTCCTCTCGG 1376
||.|||..|..|| |||.|||||.|.|| .|.|||| |.|||||..||
Sbjct 1727 ACACTCGGGGCGTGCGCCGGGACCTGCCCCCAGCCTCGG--CCTCCCGCTCCGTCCCCATCCCACTCCTCCTGG 1798
Query 1377 CCA-------CG-AG--------CTGGACGCTCTTCAGGACGTTTCACCGCCCCC-----------------TC 1417
||| || || |||| ||.|.|||| ||.|.|.||.| ||
Sbjct 1799 CCAGTGTGGCCGCAGCTTTTGCCCTGG--GCGCCTCAG------TCTCTGGCCTCCTGGTCTCCTGTGCTTGTC 1864
Query 1418 GCCCCGCACCTCCAGCCTTCCCGAC-TC---GCA--------GAGTCTCCCGAGGC-------CCCT-TTTCGC 1471
|||.||| ||| ||||| || ||| |||.|| |||.||| |||| |.|| |
Sbjct 1865 GCCGCGC----CCA------CCGACGTCGGGGCAAGGACATCGAGACT-CCGGGGCTCCCGCGCCCTCTCTC-C 1926
Query 1472 CTCGG--GTTTATTTATTG----------ACTGT-------------CTTTCCCCCTGTCCTCGACAGAAGAGT 1520
|||.| || ||| ||.|| | |||.|.|.||||.| |.||..
Sbjct 1927 CTCCGCAGT-------TTGGCCCGGCTCCACGGTGGGGGCCCAGAGCC---CCCGCCGCCCTCCA---AGGACG 1987
Query 1521 GGGA---GGTG-AGAAGCC-CGTCTCCTCAGTGAGCCAGCATTTC-------------AGGG------------ 1564
|||| |||| |||.||| |..|||..|| |||.| ||| ||||
Sbjct 1988 GGGACGCGGTGCAGACGCCGCAGCTCTACA-----CCACC--TTCCTGCCGCCTCCGGAGGGCGTGCCCCCGCC 2054
Query 1565 GGAGCTGGCGGACT-----CCCACTCCCCG-CTCC---------CTTCCAGCCAAGCTGCCT------------ 1611
||||||||| || ||||| ||||| .||| ||.||.|.||||| .|||
Sbjct 2055 GGAGCTGGC---CTGCCTGCCCAC-CCCCGAGTCCACGCCGGAGCTGCCGGTCAAGC-ACCTCCGCGCCGCCGG 2123
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2124 GGACCCCTGGGAGTGGAACCAGAACAGGAACAACGCCAAGGAGGGTCCGGGCCGCTCACGGGGCGGGCACGCGG 2197
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2198 CGGGCGGGCCCGCGCCCCGCGTGCTGGTGAGGCCACCGCCGCCCGGCTGTCCCGGGCAGGCCGTGGAAGTCACC 2271
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2272 ACCCTGGAGGAACTGCTGCGCTACCTGCACGGCCCGCAGCCGCCCAGAAAGGGGGCCGAGCCCCCCGCCCCTTT 2345
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2346 AACCTCGCGGGCGCTCCCGCCGGAGCCCGCCCCCGCCCTCTTGGGCGGCCCCAGCCCCAGGCCCCACGAGTGCG 2419
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2420 CCTCGCCGCTGAGGCTGGACGTGCCCCCCGAGGGCAGGTGCGCCTCTGCCCCCGCCCGGCCCGCGCTCTCCGCC 2493
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2494 CCCGCTCCCCGGCTGGGCGTCGGCGGAGGCCGGAGGTTGCCTTTCTCCGGCCACCGGGCCCCCCCTGCCCTGCT 2567
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2568 CACTCGAGTCCCCTCGGGAGGTCCCTCCAGGTACTCCGGGGGTCCCGGGAAGCACCTCCTGTACCTGGGCCGGC 2641
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2642 CCGAGGGCTACCGGGGCCGCGCCCTGAAAAGGGTGGACGTCGAGAAGCCCCAGTTGTCCCTGAAGCCTCCCCTC 2715
Query 1612 --------------------------------------------------- 1611
Sbjct 2716 GTCGGGCCCTCCTCCCGCCAGGCCGTCCCGAACGGCGGCCGTTTCAACTTT 2766
