Nucleotide Global Alignment
Description
- Query:
- TRCN0000468535
- Subject:
- XR_881437.2
- Aligned Length:
- 4180
- Identities:
- 2420
- Gaps:
- 1418
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGCCAGGCCCTTTCTGGGGCTGCCGGGAAGAACGTGCGTGCGGCTGGGCCGGAGCACGGCTCATGTGCTGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTCCCTCAGGTTATCTGACCGTCTCTGGCCTTCTTTTCACAGGTGAGCAGCGGGGACGGTGGTAGACTGAGCT 148
Query 1 ------------ATGGCTTCCTCCAACCCTCCTCCACAGCCTGCCATAGGAGATCAGCTGGTTCCAGGAGTCCC 62
|||||||||||.||||||||||||||||||||||||||||.||..||||.|||..|.|..||
Sbjct 149 GGACCCTGTCTGATGGCTTCCTCGAACCCTCCTCCACAGCCTGCCATAGGAGCTCCCCTGGCTCCCAGCGCTCC 222
Query 63 AGGCCCCTCCTCTGAGGCAGAGGACGACCCAGGAGAGGCGTTTGAGTTTGATGACAGTGATGATGAAGAGGACA 136
||||||||||.|.||||..|||||.|||.|.|||||.||.|||||||||||||||||||||||.||.|||||||
Sbjct 223 AGGCCCCTCCCCCGAGGTGGAGGAGGACTCCGGAGAAGCCTTTGAGTTTGATGACAGTGATGAGGAGGAGGACA 296
Query 137 CCAGCGCAGCCCTGGGCGTCCCCAGCCTTGCTCCTGAGAGGGACACAGACCCCCCACTGATCCACTTGGACTCC 210
|||||.|.|.|||||..|||||..||||.||.|||||||||||||||||.|||.|.||||||..|||.|||.|.
Sbjct 297 CCAGCTCTGGCCTGGTTGTCCCTGGCCTCGCCCCTGAGAGGGACACAGAGCCCTCGCTGATCTGCTTTGACACT 370
Query 211 ATCCCTGTCACTGACCCAGACCCAGCAGCTGCTCCACCCGGCACAGGGGTGCCAGC--CTG-GGTGAGCAATGG 281
.||||.|.|.|.||||..||||||||||||||.||||||...||||.|| ||.| ||| |||.||||||||
Sbjct 371 GTCCCGGGCTCAGACCTGGACCCAGCAGCTGCACCACCCCAGACAGAGG---CACCCACTGTGGTCAGCAATGG 441
Query 282 GGATGCAGCGGACGCAGCCTTCTCCGGGGCCCGGCACTCCAGCTGGAAGCGGAAGAGTTCCCGTCGCATTGACC 355
||||||.|.||.||||||..||||.||||.|||||.|||||||||||||||||||||.||.|||||.|||||||
Sbjct 442 GGATGCGGTGGGCGCAGCGATCTCTGGGGTCCGGCGCTCCAGCTGGAAGCGGAAGAGCTCACGTCGAATTGACC 515
Query 356 GGTTCACTTTCCCCGCCCTGGAAGAGGATGTGATTTATGACGACGTCCCCTGCGAGAGCCCAGATGCGCATCAG 429
|.|||||||||||.||||||||.||.||||||||||||||||||||||||||.|||||||||||.||.||||||
Sbjct 516 GCTTCACTTTCCCTGCCCTGGAGGAAGATGTGATTTATGACGACGTCCCCTGTGAGAGCCCAGACGCCCATCAG 589
Query 430 CCCGGGGCAGAGAGGAACCTGCTCTACGAGGATGCGCACCGGGCTGGGGCCCCTCGGCAGGCGGAGGACCTAGG 503
||||||||.|||.||..|||..|.||||||||||.|||.||.||.||.||.||.||..||.|.|||||||||||
Sbjct 590 CCCGGGGCCGAGCGGGGCCTCGTTTACGAGGATGTGCATCGTGCAGGAGCACCGCGTGAGACCGAGGACCTAGG 663
Query 504 CTGGAGCTCCAGTGAGTTCGAGAGCTACAGCGAGGACTCGGGGGAGGAGGCCAAGCCGGAGGTCGAGGTCGAGC 577
|||||||||.||||||||.||||||||||||||||||||.|||||||||.||||.||| ||||.|||||
Sbjct 664 CTGGAGCTCTAGTGAGTTTGAGAGCTACAGCGAGGACTCTGGGGAGGAGACCAAACCG------GAGGCCGAGC 731
Query 578 CCGCCAAGCACCGAGTGTCCTTCCAGCCC--------------------------------------------- 606
||.|.||||||||||.|||||||||||||
Sbjct 732 CCACTAAGCACCGAGGGTCCTTCCAGCCCAAGCTTTCTCCAGACCTGACTAGGCTAAAGGAGAGATACGTCAGG 805
Query 607 ------------------------------------------------------------------------AA 608
||
Sbjct 806 ACTAAGAGAGACATCTTGGCTTTGAGAGTTGGGGGTAGAGACATGCAGGAGCTGAAGCTCAAGTGCGATTGTAA 879
Query 609 GATGACCCAGCTCATGAAGGCCGCCAAGAGCGGGACCAAGGATGGGCTGGAGAAGACACGGATGGCCGTGATGC 682
||||||||||||||||||||||||||||||||||||||.||||||||||||||||||.|||||||||||.||||
Sbjct 880 GATGACCCAGCTCATGAAGGCCGCCAAGAGCGGGACCAGGGATGGGCTGGAGAAGACCCGGATGGCCGTCATGC 953
Query 683 GCAAAGTCTCCTTCCTGCACAGGAAGGACGTCCTCGGTGACTCGGAGGAGGAGGACATGGGGCTCCTGGAGGTC 756
|.|||||||||||.|||||.|||||.||.||||||||||||||.||.||.||.||.|||||||||||||||||.
Sbjct 954 GAAAAGTCTCCTTTCTGCATAGGAAAGATGTCCTCGGTGACTCAGAAGAAGAAGATATGGGGCTCCTGGAGGTT 1027
Query 757 AGCGTTTCGGACATCAAGCCCCCAGCCCCAGAGCTGGGCCCCATGCCAGAGGGCCTGAGCCCTCAGCAGGTGGT 830
.|.||..|.||||||||.||.||.||.||||||||||||||||||||.||.|||.||||.||||||||||||||
Sbjct 1028 GGTGTGACAGACATCAAACCTCCCGCGCCAGAGCTGGGCCCCATGCCGGATGGCTTGAGTCCTCAGCAGGTGGT 1101
Query 831 CCGGAGGCATATCCTGGGCTCCATCGTGCAGAGCGAAGGCAGCTACGTGGAGTCTCTGAAGCGGATACTCCAGG 904
||||||.||.|||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1102 CCGGAGACACATCCTAGGCTCCATCGTGCAGAGCGAAGGCAGCTACGTGGAGTCACTGAAGCGGATACTCCAGG 1175
Query 905 ACTACCGCAACCCCCTGATGGAGATGGAGCCCAAGGCGCTGAGCGCCCGCAAGTGCCAGGTGGTGTTCTTCCGC 978
|.|||||.|||||.||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1176 ATTACCGTAACCCACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCCGCAAGTGTCAGGTGGTGTTCTTCCGC 1249
Query 979 GTGAAGGAGATCCTGCACTGCCACTCCATGTTCCAGATCGCCCTGTCCTCCCGCGTGGCTGAGTGGGATTCCAC 1052
|||||||||||.||.||.||.||||||||||||||||||||.|||||||||||||||||.||||||||.|||||
Sbjct 1250 GTGAAGGAGATTCTACATTGTCACTCCATGTTCCAGATCGCTCTGTCCTCCCGCGTGGCCGAGTGGGACTCCAC 1323
Query 1053 CGAGAAGATCGGGGACCTCTTCGTGGCCTCGTTTTCCAAGTCCATGGTGCTAGATGTGTACAGTGACTACGTGA 1126
.||||||||.||.||||||||.|||||.||.||.||||||||||||||.||||||||.|||||.|||||.||||
Sbjct 1324 AGAGAAGATTGGAGACCTCTTTGTGGCTTCATTCTCCAAGTCCATGGTCCTAGATGTATACAGCGACTATGTGA 1397
Query 1127 ACAACTTCACCAGTGCCATGTCCATCATCAAGAAGGCCTGCCTCACCAAGCCTGCCTTCCTCGAGTTCCTCAAG 1200
||||||||||||..||||||||||||||||||||||||||.|||||||||||.||.|||||.|||||.||||||
Sbjct 1398 ACAACTTCACCAACGCCATGTCCATCATCAAGAAGGCCTGTCTCACCAAGCCAGCGTTCCTTGAGTTTCTCAAG 1471
Query 1201 CGACGGCAGGTGTGCAGCCCAGACCGTGTCACCCTCTACGGGCTGATGGTCAAGCCCATCCAGAGGTTCCCACA 1274
||.||||||||||||||..|.|||||.|||||||||||.|||.|||||||.||.||..|.|||||.||.|||||
Sbjct 1472 CGGCGGCAGGTGTGCAGTACGGACCGAGTCACCCTCTATGGGTTGATGGTGAAACCTGTTCAGAGATTTCCACA 1545
Query 1275 GTTCATACTCCTGCTTCAGGACATGCTGAAGAACACCCCCAGGGGCCATCCGGACAGGCTGTCGCTGCAGCTGG 1348
||||||.|||||.||.||||||||||||||||||||.|||.|||||||.||.||||||.|||||||||||||.|
Sbjct 1546 GTTCATCCTCCTACTCCAGGACATGCTGAAGAACACTCCCCGGGGCCACCCTGACAGGTTGTCGCTGCAGCTAG 1619
Query 1349 CCCTCACAGAGCTGGAGACGCTGGCTGAGAAGCTGAACGAGCAGAAGCGGCTGGCTGACCAGGTGGCTGAGATC 1422
|||||||.||||||||||||||||||||||||||||||||||||||||||.||||.||||||||||||||||||
Sbjct 1620 CCCTCACGGAGCTGGAGACGCTGGCTGAGAAGCTGAACGAGCAGAAGCGGTTGGCCGACCAGGTGGCTGAGATC 1693
Query 1423 CAGCAGCTGACCAAGAGCGTCAGTGACCGCAGCAGCCTCAACAAGCTGTTGACCTCAGGCCAGCGGCAGCTGCT 1496
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1694 CAGCAGCTGACCAAGAGTGTCAGTGACCGCAGCAGCCTCAACAAGCTGTTGACCTCTGGCCAGCGGCAGCTGCT 1767
Query 1497 CCTGTGTGAGACGTTGACGGAGACCGTGTACGGTGACCGCGGGCAGCTAATTAAGTCCAAGGAGCGTCGGGTCT 1570
.|||||||||||..||||.|||||.|||||.||.|||||.||||||||.||.||||||||||||||..||||||
Sbjct 1768 TCTGTGTGAGACACTGACTGAGACGGTGTATGGAGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCAGGGTCT 1841
Query 1571 TCCTGCTCAACGACATGCTTGTCTGTGCCAACATCAACTTCAAGCCTGCCAACCACAGGGGCCAGCTGGAGATC 1644
||||||||||.||||||||.|||||.||||||||||||||||||||..|||||||||||||||||||.||||||
Sbjct 1842 TCCTGCTCAATGACATGCTGGTCTGCGCCAACATCAACTTCAAGCCCTCCAACCACAGGGGCCAGCTAGAGATC 1915
Query 1645 AGCAGCCTGGTGCCCCTGGGGCCCAAGTATGTGGTGAAGTGGAACACGGCGCTGCCCCAGGTGCAGGTGGTGGA 1718
|||||||||||.||.||||||||||||||.|||||||||||||||||.||.|||||.||||||||||||||.||
Sbjct 1916 AGCAGCCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGTGGAACACAGCTCTGCCTCAGGTGCAGGTGGTAGA 1989
Query 1719 GGTGGGCCAGGACGGTGGCACCTATGACAAGGACAATGTGCTCATCCAGCACTCAGGCGCCAAGAAGGCCTCTG 1792
||||||.|||||.|||||||||||.|||||.||||||.|||||||||||||..|.||.||||||||||||.|||
Sbjct 1990 GGTGGGTCAGGATGGTGGCACCTACGACAAAGACAATCTGCTCATCCAGCATGCTGGAGCCAAGAAGGCCACTG 2063
Query 1793 CCTCAGGGCAGGCTCAGAATAAGGTGTACCTCGGCCCCCCACGCCTCTTCCAGGAGCTGCAGGACCTGCAGAAG 1866
|..||||||||||.|||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 2064 CTGCAGGGCAGGCCCAGAACAAGGTGTACCTGGGCCCCCCACGCCTCTTCCAGGAGCTGCAGGACCTGCAGAAG 2137
Query 1867 GACCTGGCCGTGGTGGAGCAGATCACGCTTCTCATCAGCACGCTGCACGGCACCTACCAGAACCTGAACATGAC 1940
||||||||||||||||||||||||||.||.|||||||||||..||||.|||||.||||||||.|||||||||||
Sbjct 2138 GACCTGGCCGTGGTGGAGCAGATCACCCTCCTCATCAGCACCTTGCATGGCACTTACCAGAATCTGAACATGAC 2211
Query 1941 TGTGGCTCAAGACTGGTGCCTGGCCCTGCAGAGGCTGATGCGGGTGAAGGAGGAAGAGATCCACTCGGCCAACA 2014
||||||.|||||||||||||||||.|||||||||||||||||||||||||||||.|||||.|||||||||||||
Sbjct 2212 TGTGGCCCAAGACTGGTGCCTGGCGCTGCAGAGGCTGATGCGGGTGAAGGAGGAGGAGATTCACTCGGCCAACA 2285
Query 2015 AGTGCCGTCTCAGGCTCCTGCTTCCTGGGAAACCCGACAAGTCCGGCCGCCCCATTAGCTTCATGGTGGTTTTC 2088
|||||||.||.|||||.|||||.||.|||||.||.||||||||.|||||.|||||.||.|||||||||||.|||
Sbjct 2286 AGTGCCGCCTGAGGCTGCTGCTCCCCGGGAAGCCAGACAAGTCTGGCCGGCCCATCAGTTTCATGGTGGTCTTC 2359
Query 2089 ATCACCCCCAACCCCCTGAGCAAGATTTCCTGGGTCAACAGGTTACATTTGGCCAAAATCGGACTCCGGGAGGA 2162
||||||||.||||||||||||||||||||||||||||||||.|||||.|||||.||.||.|||||..|||||||
Sbjct 2360 ATCACCCCGAACCCCCTGAGCAAGATTTCCTGGGTCAACAGATTACACTTGGCAAAGATTGGACTAAGGGAGGA 2433
Query 2163 GAACCAGCCAGGCTGGCTATGCCCGGATGAGGACAAGAAGAGCAAAGCCCCATTCTGGTGCCCGATCCTGGCCT 2236
||||||||||||.|||||.||.||.||||||||||||||.|||||||||||.|||||||||||.||||||||||
Sbjct 2434 GAACCAGCCAGGATGGCTGTGTCCCGATGAGGACAAGAAAAGCAAAGCCCCGTTCTGGTGCCCCATCCTGGCCT 2507
Query 2237 GCTGCATCCCTGCCTTCTCCTCCCGGGCACTCAGCCTGCAG--------------------------------- 2277
|||||.||||.||.||||||||||||.|.|||||.||||||
Sbjct 2508 GCTGCGTCCCCGCTTTCTCCTCCCGGACCCTCAGTCTGCAGAGCCCGCCCCTCCATCTGGAGCAACCGTTGTCT 2581
Query 2278 -------------------------------------------------------------------------- 2277
Sbjct 2582 ATCCTCTCCCAAGCAGATGAGGACCCTGAGCTCTGGGACGGGCGAGCGAGCGTGGGACCCAGCACAGATAAATA 2655
Query 2278 -------------------------------------------------------------------CTTGGGG 2284
|||||||
Sbjct 2656 GTCGCAGGAGCCGTGCGGGCTGGGCTGTAGACTGGGGCGCTAAGAGCTGACAGAGCACCTTGGCGATCTTGGGG 2729
Query 2285 CCCTGGTCCACAGTCCTGTCAACTGTCCCCTGCTGGGTTTCTCAGCCGTCAGCACCTCCCTTCCACAGGGCTAC 2358
.||||||||||||||||||.||||.||||||||||||.|||||.||.||||||||.||||||||||||||||||
Sbjct 2730 GCCTGGTCCACAGTCCTGTTAACTCTCCCCTGCTGGGCTTCTCGGCGGTCAGCACTTCCCTTCCACAGGGCTAC 2803
Query 2359 CTCTGGGTCGGGGGCGGACAGGAAGGCGCAGGGGGCCAGGTGGAAATCTTTTCCTTGAACCGGCCCTCGCCCCG 2432
||.|||||.||.||.||.|||||.||.||.||.|||||||||||.|||||.|||.||||||||||.||.||.||
Sbjct 2804 CTTTGGGTTGGCGGTGGTCAGGAGGGTGCTGGTGGCCAGGTGGAGATCTTCTCCCTGAACCGGCCTTCACCGCG 2877
Query 2433 CACCGTCAAGTCCTTCCCACTGGCAGCCCCTGTGCTCTGCATGGAGTATATCCCGGAGCTGGAGGAGGAGGCGG 2506
|||.|||||||||||||||.||||.|||||||||||||||||.||||||||.||.||.|.||||||||||||.|
Sbjct 2878 CACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTGCTCTGCATAGAGTATATTCCAGATCCGGAGGAGGAGGCTG 2951
Query 2507 A--GAGCAGAGACGAGAGCCCGACAGTTGCTGACCCCTCGGCCACGGTGCATCCAACCATCTGCCTCGGGCTCC 2578
| |.|||||| |||||||.|.|||...|.||.|||||||.|||.||||||||.||..|||||||.||.||.|
Sbjct 2952 AGGGTGCAGAG--GAGAGCCGGGCAGCCACCGATCCCTCGGTCACAGTGCATCCCACTGTCTGCCTTGGACTGC 3023
Query 2579 AGGATGGCAGCATCCTCCTCTACAGCAGTGTGGACACTGGCACCCAGTGCCTGGTGAGCTGCAGGAGCCCAGGT 2652
||||||||||||||||.||.||..|||||||||||||.||.|||||||||||||..|.|||||.|||||||||.
Sbjct 3024 AGGATGGCAGCATCCTACTGTATGGCAGTGTGGACACGGGTACCCAGTGCCTGGCCACCTGCAAGAGCCCAGGC 3097
Query 2653 CTGCAGCCTGTGCTCTGCCTGCGACACAGCCCCTTCCACCTGCTCGCTGGCCTGCAGGATGGGACCCTTGCTGC 2726
|.|||||||||||||||||||||.||||||||.|||.|||||||.||.|||||.|||||.||||||||.|||||
Sbjct 3098 CCGCAGCCTGTGCTCTGCCTGCGTCACAGCCCTTTCTACCTGCTTGCCGGCCTCCAGGACGGGACCCTCGCTGC 3171
Query 2727 TTACCCTCGGACCAGCGGAGGTG----TCCTGTGGGACCTGGAGAGCCCTCCCGTGTGCCTGACTGTGGGGCCC 2796
.||.|||||||||| |.|||| ||| .|||||||||||||||||||||.|
Sbjct 3172 CTATCCTCGGACCA---GTGGTGACATTCC-CTGGGACCTGGAGAGCCCTCCCAT------------------- 3222
Query 2797 GGGCCTGTCCGCACCCTGTTGAGCCTGGAGGATGCCGTGTGGGCCAGCTGTGGGCCCCGGGTCACTGTCCTGGA 2870
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 2871 AGCCACCACCCTGCAGCCTCAGCAAAGCTTCGAGGCGCACCAGGACGAGGCAGTGAGCGTGACACACATGGTGA 2944
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 2945 AGGCGGGCAGCGGCGTCTGGATGGCCTTCTCCTCCGGCACCTCCATCCGCCTCTTCCACACTGAGACCCTGGAG 3018
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 3019 CATCTGCAAGAGATCAACATCGCCACCAGGACCACCTTCCTCCTGCCAGGCCAGAAGCACTTGTGTGTCACCAG 3092
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 3093 CCTCCTGATCTGCCAGGGTCTGCTCTGGGTGGGCACTGACCAGGGTGTCATCGTCCTGCTGCCCGTGCCTCGGC 3166
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 3167 TGGAAGGCATCCCCAAGATCACAGGGAAAGGCATGGTCTCACTCAATGGGCACTGTGGGCCTGTGGCCTTCCTG 3240
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 3241 GCTGTGGCTACCAGCATCCTGGCCCCTGACATCCTGCGGAGTGACCAGGAGGAGGCTGAGGGGCCCCGGGCTGA 3314
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 3315 GGAGGACAAGCCAGACGGGCAGGCACACGAGCCCATGCCCGACAGCCACGTGGGCCGAGAGCTGACCCGCAAGA 3388
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 3389 AGGGCATCCTCTTGCAGTACCGCCTGCGCTCCACCGCACACCTCCCGGGCCCGCTGCTCTCCATGCGGGAGCCG 3462
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 3463 GCGCCTGCTGATGGCGCAGCTTTGGAGCACAGCGAGGAGGACGGCTCCATTTACGAGATGGCCGACGACCCCGA 3536
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 3537 CGTCTGGGTGCGCAGCCGGCCCTGCGCCCGCGACGCCCACCGCAAGGAGATTTGCTCTGTGGCCATCATCTCCG 3610
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 3611 GCGGGCAGGGCTACCGCAACTTTGGCAGCGCTCTGGGCAGCAGTGGGAGGCAGGCCCCGTGTGGGGAGACGGAC 3684
Sbjct 3223 -------------------------------------------------------------------------- 3222
Query 3685 AGCACCCTCCTCATCTGGCAGGTGCCCTTGATGCTA 3720
Sbjct 3223 ------------------------------------ 3222