Nucleotide Global Alignment

Description

Query:
TRCN0000468769
Subject:
XM_011534689.2
Aligned Length:
1791
Identities:
738
Gaps:
1011

Alignment

Query    1  -----------------------------------------------------------------------ATG  3
                                                                                   |.|
Sbjct    1  ATGGGCCCAGGCGAGCGCGCCGGTGGCGGCGGCGACGCGGGGAAGGGCAATGCGGCGGGCGGCGGCGGCGGAGG  74

Query    4  GAGTCTCGCTCTGGCATCCA-GGCTGGAGT-----GCGGTG-TCGCGATCTCGGCTCACTGCAAC-CTCCGCCT  69
            |     ||||| |||..|.| |||.|| ||     |||||| .||||  ||..||   ||||..| |||||  |
Sbjct   75  G-----CGCTC-GGCGACGACGGCCGG-GTCCCGGGCGGTGAGCGCG--CTGTGC---CTGCTGCTCTCCG--T  134

Query   70  ---CTCGCGTTAAAGCAGTTCT-CCAGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCT  139
               ||||       ||.|  || ||.||||           ||.||||||..|..|||||      .||.||||
Sbjct  135  GGGCTCG-------GCGG--CTGCCTGCCT-----------GCTGCTGGGTGTCCAGGCG------GCCGCGCT  182

Query  140  ----------GTGGCTTC-CTTTTTGAAGTCAGCGAGA-------CCACGAACCC---ACCGGCAGGAACC---  189
                      |||||..| ||....||.|  ||||.||       |..||  |.|   .|||.||||..||   
Sbjct  183  GCAGGGCCGGGTGGCGGCGCTCGAGGAGG--AGCGGGAGCTGCTGCGGCG--CGCGGGGCCGCCAGGCGCCCTG  252

Query  190  AACTCC-------AGACACACTTTGACC-----------GTGAAGTTGGACGGACTAGCGAAGATCCGGACTGC  245
            .||.||       ||.|.|||.|.||.|           |.|||||||||||||||||||||||||||||||||
Sbjct  253  GACGCCTGGGCCGAGCCGCACCTGGAGCGCCTGCTGCGGGAGAAGTTGGACGGACTAGCGAAGATCCGGACTGC  326

Query  246  TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG  319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  327  TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG  400

Query  320  ACCCTGGTCCTCCA---------------------------GGACCCCTGGGTTTGGATGGCAAGCCCGGACTT  366
            ||||||||||||||                           |||||||||||||||||||||||||||||||||
Sbjct  401  ACCCTGGTCCTCCAGGGCAATCAGGACGAGATGGCTACCCGGGACCCCTGGGTTTGGATGGCAAGCCCGGACTT  474

Query  367  CCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGC  440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  475  CCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGC  548

Query  441  TGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGG  514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  549  TGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGG  622

Query  515  GAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG  588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  623  GAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG  696

Query  589  CCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCC  662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  697  CCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCC  770

Query  663  CAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGC  736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  771  CAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGC  844

Query  737  CTGGCCACCGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGACGTCCGGGATCCTGGCCTCGGCTCTGTCTCC  810
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct  845  CTGGCCACCGAGGCACGGATGGAGCTGCAGGGCCCCG-------------------------------------  881

Query  811  TCATGCTCCCAGAGGCTGGCTTCTTCCTCCAAAAAAAATGGATCTGAGCCCCCGCCTGGCTGTGCAGGGTGCCC  884
                                                                              ||||||||
Sbjct  882  ------------------------------------------------------------------GGGTGCCC  889

Query  885  CAGGCCTCAAGGGCGAGCAGGGAGACACAGTGGTGATCGACTA-------------------------------  927
            |||||||||||||||||||||||||||||||||||||||||||                               
Sbjct  890  CAGGCCTCAAGGGCGAGCAGGGAGACACAGTGGTGATCGACTATGATGGCAGGATCTTGGATGCCCTCAAGGGC  963

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct  964  GAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGGACAGAAAGGAGACCCAGGAGA  1037

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1038  GCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCA  1111

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1112  AGGGGGAGAAGGGGGAGTCGGCGTCTGACAGCCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGCCC  1185

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1186  CCTGGCCCCCCTGGCCCCCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGCAAA  1259

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1260  GGGAGAGAAGGGTGCGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTG  1333

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1334  GGCTGCCAGGAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAGGACTAGATGGTTTCCCTGGACCCCGAGGA  1407

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1408  GAGAAAGGTGATCGGAGCGAGCGTGGAGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCA  1481

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1482  GAAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGAGAATCCCACGTGCGGAGGCCGGAGAG  1555

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1556  GGGCACCAGGCTGGCGGGGCCCTGCGAGGGGCAATGGGCCATGCCCTGCGGGCCCCGACGGGCTGCCTGTGCCT  1629

Query  928  ---------------  927
                           
Sbjct 1630  GGCTGCTGGCATAAG  1644