Nucleotide Global Alignment

Description

Query:
TRCN0000468769
Subject:
XM_011534690.2
Aligned Length:
1736
Identities:
770
Gaps:
901

Alignment

Query    1  -----------------------------------------------------------------------ATG  3
                                                                                   |.|
Sbjct    1  ATGGGCCCAGGCGAGCGCGCCGGTGGCGGCGGCGACGCGGGGAAGGGCAATGCGGCGGGCGGCGGCGGCGGAGG  74

Query    4  GAGTCTCGCTCTGGCATCCA-GGCTGGAGT-----GCGGTG-TCGCGATCTCGGCTCACTGCAAC-CTCCGCCT  69
            |     ||||| |||..|.| |||.|| ||     |||||| .||||  ||..||   ||||..| |||||  |
Sbjct   75  G-----CGCTC-GGCGACGACGGCCGG-GTCCCGGGCGGTGAGCGCG--CTGTGC---CTGCTGCTCTCCG--T  134

Query   70  ---CTCGCGTTAAAGCAGTTCT-CCAGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCT  139
               ||||       ||.|  || ||.||||           ||.||||||..|..|||||      .||.||||
Sbjct  135  GGGCTCG-------GCGG--CTGCCTGCCT-----------GCTGCTGGGTGTCCAGGCG------GCCGCGCT  182

Query  140  ----------GTGGCTTC-CTTTTTGAAGTCAGCGAGA-------CCACGAACCC---ACCGGCAGGAACC---  189
                      |||||..| ||....||.|  ||||.||       |..||  |.|   .|||.||||..||   
Sbjct  183  GCAGGGCCGGGTGGCGGCGCTCGAGGAGG--AGCGGGAGCTGCTGCGGCG--CGCGGGGCCGCCAGGCGCCCTG  252

Query  190  AACTCC-------AGACACACTTTGACC-----------GTGAAGTTGGACGGACTAGCGAAGATCCGGACTGC  245
            .||.||       ||.|.|||.|.||.|           |.|||||||||||||||||||||||||||||||||
Sbjct  253  GACGCCTGGGCCGAGCCGCACCTGGAGCGCCTGCTGCGGGAGAAGTTGGACGGACTAGCGAAGATCCGGACTGC  326

Query  246  TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG  319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  327  TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG  400

Query  320  ACCCTGGTCCTCCAGGACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAAAAGGGTGCA  393
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct  401  ACCCTGGTCCTCCAGGACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAAAA-------  467

Query  394  CCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGCTGGGCCTCCGGGGCCCCCTGGACCTCC  467
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  468  --------------------GGGAGACCAAGGACAAGATGGAGCTGCTGGGCCTCCGGGGCCCCCTGGACCTCC  521

Query  468  TGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAG  541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  522  TGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAG  595

Query  542  GAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAGCCTGGAGTACCTGGA  615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  596  GAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAGCCTGGAGTACCTGGA  669

Query  616  AAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAGCATGGGGCC  689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  670  AAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAGCATGGGGCC  743

Query  690  TCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGGAGCTG  763
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  744  TCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGGAGCTG  817

Query  764  CAGGGCCCCGGGGTGACGTCCGGGATCCT----GGC---------------------CTCGGCTCTG-------  805
            |||||||||||||||.|  ||.||  |||    |||                     .|||.||.||       
Sbjct  818  CAGGGCCCCGGGGTGCC--CCAGG--CCTCAAGGGCGAGCAGGGAGACACAGTGGTGATCGACTATGATGGCAG  887

Query  806  --TCT-------CCTCATG----CTCC-------CAGAGGC-----TGGCTTCTTCCTCCAAAAAAAATGGATC  854
              |||       |||||.|    ||||       |||.|||     .||      ||.||       |.|||||
Sbjct  888  GATCTTGGATGCCCTCAAGGGGCCTCCCGGACCACAGGGGCCCCCAGGG------CCACC-------AGGGATC  948

Query  855  ---TGAGCC-----CCCGCCTGGCTGTGCAGGGTGCCCCAGGCCTC---------AAGGGC-------GAGCAG  904
               .|||||     |..||.|||.| |||..|||||||||||..||         ||||||       || |||
Sbjct  949  CCTGGAGCCAAGGGCGAGCTTGGAT-TGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGGA-CAG  1020

Query  905  ---GGAGACACAGTGGTGATC------------GACTA------------------------------------  927
               ||||||.||  ||.||.|            ||||.                                    
Sbjct 1021  AAAGGAGACCCA--GGAGAGCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTGTCCGGCCTC  1092

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1093  CCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTCGGCGTCTGACAGCCTACAGGAGAGCCTGGCTCAGCT  1166

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1167  CATAGTGGAGCCAGGGCCCCCTGGCCCCCCTGGCCCCCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCCCA  1240

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1241  AGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTGCGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGCCAGTT  1314

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1315  GGCCCACCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAGGACTAGATGG  1388

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1389  TTTCCCTGGACCCCGAGGAGAGAAAGGTGATCGGAGCGAGCGTGGAGAGAAGGGAGAACGAGGGGTCCCCGGCC  1462

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1463  GGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGAGAATCCC  1536

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1537  ACGTGCGGAGGCCGGAGAGGGGCACCAGGCTGGCGGGGCCCTGCGAGGGGCAATGGGCCATGCCCTGCGGGCCC  1610

Query  928  ----------------------------------  927
                                              
Sbjct 1611  CGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAG  1644

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