Nucleotide Global Alignment

Description

• Query: TRCN0000468769
• Subject: XM_017010018.1
• Aligned Length: 1101
• Identities: 675
• Gaps: 360

Alignment

Query    1  -----------------------------------------------------------------------ATG  3
                                                                                   |.|
Sbjct    1  ATGGGCCCAGGCGAGCGCGCCGGTGGCGGCGGCGACGCGGGGAAGGGCAATGCGGCGGGCGGCGGCGGCGGAGG  74

Query    4  GAGTCTCGCTCTGGCATCCA-GGCTGGAGT-----GCGGTG-TCGCGATCTCGGCTCACTGCAAC-CTCCGCCT  69
            |     ||||| |||..|.| |||.|| ||     |||||| .||||  ||..||   ||||..| |||||  |
Sbjct   75  G-----CGCTC-GGCGACGACGGCCGG-GTCCCGGGCGGTGAGCGCG--CTGTGC---CTGCTGCTCTCCG--T  134

Query   70  ---CTCGCGTTAAAGCAGTTCT-CCAGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCT  139
               ||||       ||.|  || ||.||||           ||.||||||..|..|||||      .||.||||
Sbjct  135  GGGCTCG-------GCGG--CTGCCTGCCT-----------GCTGCTGGGTGTCCAGGCG------GCCGCGCT  182

Query  140  ----------GTGGCTTC-CTTTTTGAAGTCAGCGAGA-------CCACGAACCC---ACCGGCAGGAACC---  189
                      |||||..| ||....||.|  ||||.||       |..||  |.|   .|||.||||..||   
Sbjct  183  GCAGGGCCGGGTGGCGGCGCTCGAGGAGG--AGCGGGAGCTGCTGCGGCG--CGCGGGGCCGCCAGGCGCCCTG  252

Query  190  AACTCC-------AGACACACTTTGACC-----------GTGAAGTTGGACGGACTAGCGAAGATCCGGACTGC  245
            .||.||       ||.|.|||.|.||.|           |.|||||||||||||||||||||||||||||||||
Sbjct  253  GACGCCTGGGCCGAGCCGCACCTGGAGCGCCTGCTGCGGGAGAAGTTGGACGGACTAGCGAAGATCCGGACTGC  326

Query  246  TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG  319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  327  TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG  400

Query  320  ACCCTGGTCCTCCA---------------------------GGACCCCTGGGTTTGGATGGCAAGCCCGGACTT  366
            ||||||||||||||                           |||||||||||||||||||||||||||||||||
Sbjct  401  ACCCTGGTCCTCCAGGGCAATCAGGACGAGATGGCTACCCGGGACCCCTGGGTTTGGATGGCAAGCCCGGACTT  474

Query  367  CCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGC  440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  475  CCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGC  548

Query  441  TGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGG  514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  549  TGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGG  622

Query  515  GAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG  588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  623  GAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG  696

Query  589  CCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCC  662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  697  CCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCC  770

Query  663  CAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGC  736
            ||||                 ||||||||         ||..|.||..|.||.|||.|                
Sbjct  771  CAAG-----------------GGGGCCTC---------ACTCTCTGCCCTGTCCCCAA----------------  802

Query  737  CTGGCCACCGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGACGTCCGGGATCCTGGCCTCGGCTCTGTCTCC  810
               ||||             |||.||           |||||.|.|||    ||.||.|.|  ||||     ||
Sbjct  803  ---GCCA-------------GGAACT-----------GGGTGTCATCC----TCATGCCTT--GCTC-----CC  838

Query  811  TCA------------TGCTCCCAGAGGCTGGCTTCTTC-------CTCCAAAAAAAATGGATC---TGAGCCCC  862
            .||            .||..|||.|..|||||     |       ||||    ||||||  ||   ||||||||
Sbjct  839  CCAACCCCTCGCAACAGCCACCAAATCCTGGC-----CAGCCAGTCTCC----AAAATG--TCCCTTGAGCCCC  901

Query  863  CGCCTGGCTGTGCAGGGTGCCCCAGGCCTCAAGGGCGAGCAGGGAGACACAGTGGTGATCGACTA  927
            .||            |.|||||||.|                                       
Sbjct  902  TGC------------GCTGCCCCAAG---------------------------------------  915