Nucleotide Global Alignment

Description

Query:
TRCN0000468783
Subject:
NM_001350543.1
Aligned Length:
2706
Identities:
2519
Gaps:
186

Alignment

Query    1  ATGGTGCCCTGGGTGCGGACGATGGGGCAGAAGCTGAAGCAGCGGCTGCGACTGGACGTGGGACGCGAGATCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCGCCAGTACCCGCTGTTCTGCTTCCTGCTGCTCTGTCTCAGCGCCGCCTCCCTGCTTCTTAACAGGTATATTC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATATTTTAATGATCTTCTGGTCATTTGTTGCTGGAGTTGTCACATTCTACTGCTCACTAGGACCTGATTCTCTC  222
                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  --------ATGATCTTCTGGTCATTTGTTGCTGGAGTTGTCACATTCTACTGCTCACTAGGACCTGATTCTCTC  66

Query  223  TTACCAAATATATTCTTCACAATAAAATACAAACCCAAGCAGTTAGGACTTCAGGAATTATTTCCTCAAGGTCA  296
            |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||
Sbjct   67  TTACCAAATATATTCTTCACAATAAAATACAAACCCA---AGTTAGGACTTCAGGAATTATTTCCTCAAGGTCA  137

Query  297  TAGCTGTGCTGTTTGTGGTAAAGTGAAATGTAAACGACATAGGCCTTCTTTGCTACTTGAAAACTACCAGCCAT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  138  TAGCTGTGCTGTTTGTGGTAAAGTGAAATGTAAACGACATAGGCCTTCTTTGCTACTTGAAAACTACCAGCCAT  211

Query  371  GGCTAGACCTGAAAATTTCTTCCAAGGTTGATGCATCTCTCTCAGAGGTGGATATTCCATCTATTATAACCAAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  212  GGCTAGACCTGAAAATTTCTTCCAAGGTTGATGCATCTCTCTCAGAGGTGGATATTCCATCTATTATAACCAAG  285

Query  445  AAACTATTAAAAGCAGCAATGAAGCATATAGAAGTGATAGTTAAAGCCAGACAGAAAGTAAAAAATACAGAGTT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  286  AAACTATTAAAAGCAGCAATGAAGCATATAGAAGTGATAGTTAAAGCCAGACAGAAAGTAAAAAATACAGAGTT  359

Query  519  TTTACAGCAAGCTGCTTTAGAAGAATATGGTCCAGAGCTTCATGTTGCTTTGAGAAGTCGAAGAGATGAATTGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  360  TTTACAGCAAGCTGCTTTAGAAGAATATGGTCCAGAGCTTCATGTTGCTTTGAGAAGTCGAAGAGATGAATTGC  433

Query  593  ACTATTTAAGGAAACTTACTGAACTGCTTTTTCCTTATATTTTGCCTCCTAAAGCAACAGACTGCAGATCTCTG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  434  ACTATTTAAGGAAACTTACTGAACTGCTTTTTCCTTATATTTTGCCTCCTAAAGCAACAGACTGCAGATCTCTG  507

Query  667  ACCTTACTTATAAGAGAGATTCTGTCTGGCTCTGTGTTCCTTCCTTCTTTGGATTTCCTAGCTGATCCAGATAC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  508  ACCTTACTTATAAGAGAGATTCTGTCTGGCTCTGTGTTCCTTCCTTCTTTGGATTTCCTAGCTGATCCAGATAC  581

Query  741  TGTGAATCATTTGCTTATCATCTTCATAGATGACAGTCCACCTGAAAAAGCAACTGAACCGGCTTCTCCTTTGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  582  TGTGAATCATTTGCTTATCATCTTCATAGATGACAGTCCACCTGAAAAAGCAACTGAACCGGCTTCTCCTTTGG  655

Query  815  TTCCATTCTTGCAGAAATTTGCAGAACCTAGAAATAAAAAGCCATCTGTGCTGAAGTTAGAATTGAAGCAAATC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  656  TTCCATTCTTGCAGAAATTTGCAGAACCTAGAAATAAAAAGCCATCTGTGCTGAAGTTAGAATTGAAGCAAATC  729

Query  889  AGAGAGCAACAAGATCTTTTATTTCGTTTTATGAACTTTCTGAAACAAGAAGGCGCAGTGCACGTGTTGCAGTT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  730  AGAGAGCAACAAGATCTTTTATTTCGTTTTATGAACTTTCTGAAACAAGAAGGCGCAGTGCACGTGTTGCAGTT  803

Query  963  TTGTTTGACTGTGGAGGAATTTAATGATAGAATTTTACGACCAGAATTATCAAATGATGAAATGCTGTCTCTTC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  804  TTGTTTGACTGTGGAGGAATTTAATGATAGAATTTTACGACCAGAATTATCAAATGATGAAATGCTGTCTCTTC  877

Query 1037  ATGAAGAATTGCAGAAGATTTATAAAACATACTGTTTGGATGAAAGTATTGACAAAATTAGATTTGATCCCTTC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  878  ATGAAGAATTGCAGAAGATTTATAAAACATACTGTTTGGATGAAAGTATTGACAAAATTAGATTTGATCCCTTC  951

Query 1111  ATTGTAGAAGAGATTCAAAGAATTGCTGAAGGCCCATACATAGATGTTGTGAAACTTCAAACTATGAGATGTCT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  952  ATTGTAGAAGAGATTCAAAGAATTGCTGAAGGCCCATACATAGATGTTGTGAAACTTCAAACTATGAGATGTCT  1025

Query 1185  TTTTGAAGCATATGAACATGTTCTTTCCCTTTTGGAGAATGTATTTACTCCTATGTTCTGCCATAGTGATGAGT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026  TTTTGAAGCATATGAACATGTTCTTTCCCTTTTGGAGAATGTATTTACTCCTATGTTCTGCCATAGTGATGAGT  1099

Query 1259  ATTTCAGACAACTTTTAAGAGGTGCAGAATCACCAACACGCAATTCAAAATTGAACA-----------------  1315
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
Sbjct 1100  ATTTCAGACAACTTTTAAGAGGTGCAGAATCACCAACACGCAATTCAAAATTGAACAGAGGTAGCCTAAGTTTG  1173

Query 1316  ----------GGAACACACAGAAAAGGGGAGAATCATTTGGAATCAGCAGAATAGGTAGCAAAATTAAAGGAGT  1379
                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174  GATGATTTTCGGAACACACAGAAAAGGGGAGAATCATTTGGAATCAGCAGAATAGGTAGCAAAATTAAAGGAGT  1247

Query 1380  ATTCAAAAGTACCACAATGGAGGGAGCTATGTTGCCTAATTATGGTGTAGCTGAAGGTGAAGATGATTTTATTG  1453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248  ATTCAAAAGTACCACAATGGAGGGAGCTATGTTGCCTAATTATGGTGTAGCTGAAGGTGAAGATGATTTTATTG  1321

Query 1454  AAGAAGGTATTGTTGTAATGGAAGATGATTCTCCAGTGGAGGCTGTGAGCACACCTAATACTCCCCGAAACCTT  1527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322  AAGAAGGTATTGTTGTAATGGAAGATGATTCTCCAGTGGAGGCTGTGAGCACACCTAATACTCCCCGAAACCTT  1395

Query 1528  GCTGCATGGAAAATTAGCATTCCATATGTAGACTTTTTTGAGGATCCCTCCTCTGAAAGGAAGGAGAAAAAAGA  1601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396  GCTGCATGGAAAATTAGCATTCCATATGTAGACTTTTTTGAGGATCCCTCCTCTGAAAGGAAGGAGAAAAAAGA  1469

Query 1602  AAGAATTCCTGTGTTTTGTATTGATGTTGAAAGAAATGATAGAAGAGCAGTTGGACACGAGCCTGAACATTGGT  1675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1470  AAGAATTCCTGTGTTTTGTATTGATGTTGAAAGAAATGATAGAAGAGCAGTTGGACACGAGCCTGAACATTGGT  1543

Query 1676  CTGTCTATAGAAGATATCTTGAATTCTATGTACTTGAATCAAAACTAACAGAATTTCATGGTGCATTTCCTGAT  1749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1544  CTGTCTATAGAAGATATCTTGAATTCTATGTACTTGAATCAAAACTAACAGAATTTCATGGTGCATTTCCTGAT  1617

Query 1750  GCCCAGCTTCCTTCTAAGAGGATCATTGGCCCCAAAAATTATGAATTCTTAAAGTCAAAGAGGGAAGAGTTCCA  1823
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618  GCCCAGCTTCCTTCTAAGAGGATCATTGGCCCCAAAAATTATGAATTCTTAAAGTCAAAGAGGGAAGAGTTCCA  1691

Query 1824  AGAATATCTACAGAAACTTCTGCAGCATCCAGAACTGAGTAATAGTCAACTTCTGGCAGACTTTCTTTCCCCTA  1897
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692  AGAATATCTACAGAAACTTCTGCAGCATCCAGAACTGAGTAATAGTCAACTTCTGGCAGACTTTCTTTCCCCTA  1765

Query 1898  ATGGTGGGGAAACACAATTTCTTGATAAGATACTACCAGATGTAAATCTTGGGAAAATTATAAAATCTGTTCCT  1971
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1766  ATGGTGGGGAAACACAATTTCTTGATAAGATACTACCAGATGTAAATCTTGGGAAAATTATAAAATCTGTTCCT  1839

Query 1972  GGAAAACTAATGAAAGAGAAAGGTCAGCATTTGGAACCTTTTATCATGAATTTCATTAATTCTTGTGAGTCTCC  2045
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840  GGAAAACTAATGAAAGAGAAAGGTCAGCATTTGGAACCTTTTATCATGAATTTCATTAATTCTTGTGAGTCTCC  1913

Query 2046  AAAGCCTAAACCAAGTAGACCAGAACTGACCATTCTCAGCCCTACTTCAGAAAACAACAAGAAGCTTTTCAATG  2119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914  AAAGCCTAAACCAAGTAGACCAGAACTGACCATTCTCAGCCCTACTTCAGAAAACAACAAGAAGCTTTTCAATG  1987

Query 2120  ATCTGTTTAAAAATAATGCAAACCGTGCTGAAAATACAGAGAGAAAGCAAAATCAGAATTATTTTATGGAGGTG  2193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1988  ATCTGTTTAAAAATAATGCAAACCGTGCTGAAAATACAGAGAGAAAGCAAAATCAGAATTATTTTATGGAGGTG  2061

Query 2194  ATGACTGTAGAAGGAGTCTATGATTACCTGATGTATGTAGGACGGGTAGTTTTCCAGGTTCCTGACTGGCTTCA  2267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2062  ATGACTGTAGAAGGAGTCTATGATTACCTGATGTATGTAGGACGGGTAGTTTTCCAGGTTCCTGACTGGCTTCA  2135

Query 2268  TCATCTCTTAATGGGAACTCGAATCCTCTTTAAAAACACCCTGGAAATGTATACTGATTACTATCTTCAGTGTA  2341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2136  TCATCTCTTAATGGGAACTCGAATCCTCTTTAAAAACACCCTGGAAATGTATACTGATTACTATCTTCAGTGTA  2209

Query 2342  AACTAGAACAGCTATTTCAGGAGCACCGTTTGGTCTCACTCATAACACTTCTCAGAGATGCTATATTCTGTGAA  2415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2210  AACTAGAACAGCTATTTCAGGAGCACCGTTTGGTCTCACTCATAACACTTCTCAGAGATGCTATATTCTGTGAA  2283

Query 2416  AACACTGAACCTCGCTCTCTCCAAGATAAGCAAAAAGGAGCAAAACAGACTTTTGAAGAAATGATGAATTACAT  2489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2284  AACACTGAACCTCGCTCTCTCCAAGATAAGCAAAAAGGAGCAAAACAGACTTTTGAAGAAATGATGAATTACAT  2357

Query 2490  TCCAGATCTGTTAGTCAAGTGTATTGGTGAAGAAACCAAGTATGAAAGCATCAGACTTCTGTTTGATGGCTTAC  2563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2358  TCCAGATCTGTTAGTCAAGTGTATTGGTGAAGAAACCAAGTATGAAAGCATCAGACTTCTGTTTGATGGCTTAC  2431

Query 2564  AGCAACCAGTACTCAACAAGCAGCTGACTTATGTTTTATTGGACATTGTGATACAGGAACTGTTTCCAGAGCTC  2637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2432  AGCAACCAGTACTCAACAAGCAGCTGACTTATGTTTTATTGGACATTGTGATACAGGAACTGTTTCCAGAGCTC  2505

Query 2638  AATAAGGTACAAAAGGAAGTTACCTCTGTGACATTTTGGATG  2679
            ||||||||||||||||||||||||||||||||||.|||||||
Sbjct 2506  AATAAGGTACAAAAGGAAGTTACCTCTGTGACATCTTGGATG  2547

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