Nucleotide Global Alignment

Description

Query:
TRCN0000468783
Subject:
NM_001350545.1
Aligned Length:
2739
Identities:
2323
Gaps:
405

Alignment

Query    1  ATGGTGCCCTGGGTGCGGACGATGGGGCAGAAGCTGAAGCAGCGGCTGCGACTGGACGTGGGACGCGAGATCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCGCCAGTACCCGCTGTTCTGCTTCCTGCTGCTCTGTCTCAGCGCCGCCTCCCTGCTTCTTAACAGGTATATTC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATATTTTAATGATCTTCTGGTCATTTGTTGCTGGAGTTGTCACATTCTACTGCTCACTAGGACCTGATTCTCTC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TTACCAAATATATTCTTCACAATAAAATACAAACCCAAGCAGTTAGGACTTCAGGAAT-TATTTC-CTCA-AGG  293
                                                                    || .||.|| |||| |||
Sbjct    1  --------------------------------------------------------ATGCATCTCTCTCAGAGG  18

Query  294  TCATAGCTGTGCTGTTTGTGGTAAAG----TGAAATGTAAACGACATAGGCCTTCTTTGCTACTTGAAAACTAC  363
                 |.||||           |.||    ||||                  |.|||||    ||||       
Sbjct   19  -----GATGTG-----------ACAGATGATGAA------------------TCCTTTG----TTGA-------  47

Query  364  CAGCCATGGCTAGACCTGAAAA----------TTTCTTCCAAGGTTGATGCATCTCTCT---------------  412
                       .||.||||.||          |||.||          |||||||.|||               
Sbjct   48  -----------TGAACTGAGAATAACATTACGTTTTTT----------TGCATCTGTCTTAATAAGAAGGATTC  100

Query  413  -CAGAGGTGGATATTCCATCTATTATAACCAAGAAACTATTAAAAGCAGCAATGAAGCATATAGAAGTGATAGT  485
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  101  ACA-AGGTGGATATTCCATCTATTATAACCAAGAAACTATTAAAAGCAGCAATGAAGCATATAGAAGTGATAGT  173

Query  486  TAAAGCCAGACAGAAAGTAAAAAATACAGAGTTTTTACAGCAAGCTGCTTTAGAAGAATATGGTCCAGAGCTTC  559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  174  TAAAGCCAGACAGAAAGTAAAAAATACAGAGTTTTTACAGCAAGCTGCTTTAGAAGAATATGGTCCAGAGCTTC  247

Query  560  ATGTTGCTTTGAGAAGTCGAAGAGATGAATTGCACTATTTAAGGAAACTTACTGAACTGCTTTTTCCTTATATT  633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  248  ATGTTGCTTTGAGAAGTCGAAGAGATGAATTGCACTATTTAAGGAAACTTACTGAACTGCTTTTTCCTTATATT  321

Query  634  TTGCCTCCTAAAGCAACAGACTGCAGATCTCTGACCTTACTTATAAGAGAGATTCTGTCTGGCTCTGTGTTCCT  707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  322  TTGCCTCCTAAAGCAACAGACTGCAGATCTCTGACCTTACTTATAAGAGAGATTCTGTCTGGCTCTGTGTTCCT  395

Query  708  TCCTTCTTTGGATTTCCTAGCTGATCCAGATACTGTGAATCATTTGCTTATCATCTTCATAGATGACAGTCCAC  781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  396  TCCTTCTTTGGATTTCCTAGCTGATCCAGATACTGTGAATCATTTGCTTATCATCTTCATAGATGACAGTCCAC  469

Query  782  CTGAAAAAGCAACTGAACCGGCTTCTCCTTTGGTTCCATTCTTGCAGAAATTTGCAGAACCTAGAAATAAAAAG  855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  470  CTGAAAAAGCAACTGAACCGGCTTCTCCTTTGGTTCCATTCTTGCAGAAATTTGCAGAACCTAGAAATAAAAAG  543

Query  856  CCATCTGTGCTGAAGTTAGAATTGAAGCAAATCAGAGAGCAACAAGATCTTTTATTTCGTTTTATGAACTTTCT  929
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  544  CCATCTGTGCTGAAGTTAGAATTGAAGCAAATCAGAGAGCAACAAGATCTTTTATTTCGTTTTATGAACTTTCT  617

Query  930  GAAACAAGAAGGCGCAGTGCACGTGTTGCAGTTTTGTTTGACTGTGGAGGAATTTAATGATAGAATTTTACGAC  1003
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  618  GAAACAAGAAGGCGCAGTGCACGTGTTGCAGTTTTGTTTGACTGTGGAGGAATTTAATGATAGAATTTTACGAC  691

Query 1004  CAGAATTATCAAATGATGAAATGCTGTCTCTTCATGAAGAATTGCAGAAGATTTATAAAACATACTGTTTGGAT  1077
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  692  CAGAATTATCAAATGATGAAATGCTGTCTCTTCATGAAGAATTGCAGAAGATTTATAAAACATACTGTTTGGAT  765

Query 1078  GAAAGTATTGACAAAATTAGATTTGATCCCTTCATTGTAGAAGAGATTCAAAGAATTGCTGAAGGCCCATACAT  1151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  766  GAAAGTATTGACAAAATTAGATTTGATCCCTTCATTGTAGAAGAGATTCAAAGAATTGCTGAAGGCCCATACAT  839

Query 1152  AGATGTTGTGAAACTTCAAACTATGAGATGTCTTTTTGAAGCATATGAACATGTTCTTTCCCTTTTGGAGAATG  1225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  840  AGATGTTGTGAAACTTCAAACTATGAGATGTCTTTTTGAAGCATATGAACATGTTCTTTCCCTTTTGGAGAATG  913

Query 1226  TATTTACTCCTATGTTCTGCCATAGTGATGAGTATTTCAGACAACTTTTAAGAGGTGCAGAATCACCAACACGC  1299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  914  TATTTACTCCTATGTTCTGCCATAGTGATGAGTATTTCAGACAACTTTTAAGAGGTGCAGAATCACCAACACGC  987

Query 1300  AATTCAAAATTGAACA---------------------------GGAACACACAGAAAAGGGGAGAATCATTTGG  1346
            ||||||||||||||||                           |||||||||||||||||||||||||||||||
Sbjct  988  AATTCAAAATTGAACAGAGGTAGCCTAAGTTTGGATGATTTTCGGAACACACAGAAAAGGGGAGAATCATTTGG  1061

Query 1347  AATCAGCAGAATAGGTAGCAAAATTAAAGGAGTATTCAAAAGTACCACAATGGAGGGAGCTATGTTGCCTAATT  1420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1062  AATCAGCAGAATAGGTAGCAAAATTAAAGGAGTATTCAAAAGTACCACAATGGAGGGAGCTATGTTGCCTAATT  1135

Query 1421  ATGGTGTAGCTGAAGGTGAAGATGATTTTATTGAAGAAGGTATTGTTGTAATGGAAGATGATTCTCCAGTGGAG  1494
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136  ATGGTGTAGCTGAAGGTGAAGATGATTTTATTGAAGAAGGTATTGTTGTAATGGAAGATGATTCTCCAGTGGAG  1209

Query 1495  GCTGTGAGCACACCTAATACTCCCCGAAACCTTGCTGCATGGAAAATTAGCATTCCATATGTAGACTTTTTTGA  1568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1210  GCTGTGAGCACACCTAATACTCCCCGAAACCTTGCTGCATGGAAAATTAGCATTCCATATGTAGACTTTTTTGA  1283

Query 1569  GGATCCCTCCTCTGAAAGGAAGGAGAAAAAAGAAAGAATTCCTGTGTTTTGTATTGATGTTGAAAGAAATGATA  1642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284  GGATCCCTCCTCTGAAAGGAAGGAGAAAAAAGAAAGAATTCCTGTGTTTTGTATTGATGTTGAAAGAAATGATA  1357

Query 1643  GAAGAGCAGTTGGACACGAGCCTGAACATTGGTCTGTCTATAGAAGATATCTTGAATTCTATGTACTTGAATCA  1716
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358  GAAGAGCAGTTGGACACGAGCCTGAACATTGGTCTGTCTATAGAAGATATCTTGAATTCTATGTACTTGAATCA  1431

Query 1717  AAACTAACAGAATTTCATGGTGCATTTCCTGATGCCCAGCTTCCTTCTAAGAGGATCATTGGCCCCAAAAATTA  1790
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432  AAACTAACAGAATTTCATGGTGCATTTCCTGATGCCCAGCTTCCTTCTAAGAGGATCATTGGCCCCAAAAATTA  1505

Query 1791  TGAATTCTTAAAGTCAAAGAGGGAAGAGTTCCAAGAATATCTACAGAAACTTCTGCAGCATCCAGAACTGAGTA  1864
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1506  TGAATTCTTAAAGTCAAAGAGGGAAGAGTTCCAAGAATATCTACAGAAACTTCTGCAGCATCCAGAACTGAGTA  1579

Query 1865  ATAGTCAACTTCTGGCAGACTTTCTTTCCCCTAATGGTGGGGAAACACAATTTCTTGATAAGATACTACCAGAT  1938
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1580  ATAGTCAACTTCTGGCAGACTTTCTTTCCCCTAATGGTGGGGAAACACAATTTCTTGATAAGATACTACCAGAT  1653

Query 1939  GTAAATCTTGGGAAAATTATAAAATCTGTTCCTGGAAAACTAATGAAAGAGAAAGGTCAGCATTTGGAACCTTT  2012
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1654  GTAAATCTTGGGAAAATTATAAAATCTGTTCCTGGAAAACTAATGAAAGAGAAAGGTCAGCATTTGGAACCTTT  1727

Query 2013  TATCATGAATTTCATTAATTCTTGTGAGTCTCCAAAGCCTAAACCAAGTAGACCAGAACTGACCATTCTCAGCC  2086
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1728  TATCATGAATTTCATTAATTCTTGTGAGTCTCCAAAGCCTAAACCAAGTAGACCAGAACTGACCATTCTCAGCC  1801

Query 2087  CTACTTCAGAAAACAACAAGAAGCTTTTCAATGATCTGTTTAAAAATAATGCAAACCGTGCTGAAAATACAGAG  2160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1802  CTACTTCAGAAAACAACAAGAAGCTTTTCAATGATCTGTTTAAAAATAATGCAAACCGTGCTGAAAATACAGAG  1875

Query 2161  AGAAAGCAAAATCAGAATTATTTTATGGAGGTGATGACTGTAGAAGGAGTCTATGATTACCTGATGTATGTAGG  2234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1876  AGAAAGCAAAATCAGAATTATTTTATGGAGGTGATGACTGTAGAAGGAGTCTATGATTACCTGATGTATGTAGG  1949

Query 2235  ACGGGTAGTTTTCCAGGTTCCTGACTGGCTTCATCATCTCTTAATGGGAACTCGAATCCTCTTTAAAAACACCC  2308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1950  ACGGGTAGTTTTCCAGGTTCCTGACTGGCTTCATCATCTCTTAATGGGAACTCGAATCCTCTTTAAAAACACCC  2023

Query 2309  TGGAAATGTATACTGATTACTATCTTCAGTGTAAACTAGAACAGCTATTTCAGGAGCACCGTTTGGTCTCACTC  2382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2024  TGGAAATGTATACTGATTACTATCTTCAGTGTAAACTAGAACAGCTATTTCAGGAGCACCGTTTGGTCTCACTC  2097

Query 2383  ATAACACTTCTCAGAGATGCTATATTCTGTGAAAACACTGAACCTCGCTCTCTCCAAGATAAGCAAAAAGGAGC  2456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2098  ATAACACTTCTCAGAGATGCTATATTCTGTGAAAACACTGAACCTCGCTCTCTCCAAGATAAGCAAAAAGGAGC  2171

Query 2457  AAAACAGACTTTTGAAGAAATGATGAATTACATTCCAGATCTGTTAGTCAAGTGTATTGGTGAAGAAACCAAGT  2530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2172  AAAACAGACTTTTGAAGAAATGATGAATTACATTCCAGATCTGTTAGTCAAGTGTATTGGTGAAGAAACCAAGT  2245

Query 2531  ATGAAAGCATCAGACTTCTGTTTGATGGCTTACAGCAACCAGTACTCAACAAGCAGCTGACTTATGTTTTATTG  2604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2246  ATGAAAGCATCAGACTTCTGTTTGATGGCTTACAGCAACCAGTACTCAACAAGCAGCTGACTTATGTTTTATTG  2319

Query 2605  GACATTGTGATACAGGAACTGTTTCCAGAGCTCAATAAGGTACAAAAGGAAGTTACCTCTGTGACATTTTGGAT  2678
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 2320  GACATTGTGATACAGGAACTGTTTCCAGAGCTCAATAAGGTACAAAAGGAAGTTACCTCTGTGACATCTTGGAT  2393

Query 2679  G  2679
            |
Sbjct 2394  G  2394

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