Nucleotide Global Alignment

Description

Query:
TRCN0000468783
Subject:
NM_001350551.1
Aligned Length:
2706
Identities:
1655
Gaps:
1050

Alignment

Query    1  ATGGTGCCCTGGGTGCGGACGATGGGGCAGAAGCTGAAGCAGCGGCTGCGACTGGACGTGGGACGCGAGATCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCGCCAGTACCCGCTGTTCTGCTTCCTGCTGCTCTGTCTCAGCGCCGCCTCCCTGCTTCTTAACAGGTATATTC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATATTTTAATGATCTTCTGGTCATTTGTTGCTGGAGTTGTCACATTCTACTGCTCACTAGGACCTGATTCTCTC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TTACCAAATATATTCTTCACAATAAAATACAAACCCAAGCAGTTAGGACTTCAGGAATTATTTCCTCAAGGTCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TAGCTGTGCTGTTTGTGGTAAAGTGAAATGTAAACGACATAGGCCTTCTTTGCTACTTGAAAACTACCAGCCAT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GGCTAGACCTGAAAATTTCTTCCAAGGTTGATGCATCTCTCTCAGAGGTGGATATTCCATCTATTATAACCAAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AAACTATTAAAAGCAGCAATGAAGCATATAGAAGTGATAGTTAAAGCCAGACAGAAAGTAAAAAATACAGAGTT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TTTACAGCAAGCTGCTTTAGAAGAATATGGTCCAGAGCTTCATGTTGCTTTGAGAAGTCGAAGAGATGAATTGC  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  ACTATTTAAGGAAACTTACTGAACTGCTTTTTCCTTATATTTTGCCTCCTAAAGCAACAGACTGCAGATCTCTG  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  ACCTTACTTATAAGAGAGATTCTGTCTGGCTCTGTGTTCCTTCCTTCTTTGGATTTCCTAGCTGATCCAGATAC  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  TGTGAATCATTTGCTTATCATCTTCATAGATGACAGTCCACCTGAAAAAGCAACTGAACCGGCTTCTCCTTTGG  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  TTCCATTCTTGCAGAAATTTGCAGAACCTAGAAATAAAAAGCCATCTGTGCTGAAGTTAGAATTGAAGCAAATC  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  AGAGAGCAACAAGATCTTTTATTTCGTTTTATGAACTTTCTGAAACAAGAAGGCGCAGTGCACGTGTTGCAGTT  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  TTGTTTGACTGTGGAGGAATTTAATGATAGAATTTTACGACCAGAATTATCAAATGATGAAATGCTGTCTCTTC  1036
                                                                         |||||||||||||
Sbjct    1  -------------------------------------------------------------ATGCTGTCTCTTC  13

Query 1037  ATGAAGAATTGCAGAAGATTTATAAAACATACTGTTTGGATGAAAGTATTGACAAAATTAGATTTGATCCCTTC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   14  ATGAAGAATTGCAGAAGATTTATAAAACATACTGTTTGGATGAAAGTATTGACAAAATTAGATTTGATCCCTTC  87

Query 1111  ATTGTAGAAGAGATTCAAAGAATTGCTGAAGGCCCATACATAGATGTTGTGAAACTTCAAACTATGAGATGTCT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   88  ATTGTAGAAGAGATTCAAAGAATTGCTGAAGGCCCATACATAGATGTTGTGAAACTTCAAACTATGAGATGTCT  161

Query 1185  TTTTGAAGCATATGAACATGTTCTTTCCCTTTTGGAGAATGTATTTACTCCTATGTTCTGCCATAGTGATGAGT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  162  TTTTGAAGCATATGAACATGTTCTTTCCCTTTTGGAGAATGTATTTACTCCTATGTTCTGCCATAGTGATGAGT  235

Query 1259  ATTTCAGACAACTTTTAAGAGGTGCAGAATCACCAACACGCAATTCAAAATTGAACA-----------------  1315
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
Sbjct  236  ATTTCAGACAACTTTTAAGAGGTGCAGAATCACCAACACGCAATTCAAAATTGAACAGAGGTAGCCTAAGTTTG  309

Query 1316  ----------GGAACACACAGAAAAGGGGAGAATCATTTGGAATCAGCAGAATAGGTAGCAAAATTAAAGGAGT  1379
                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  310  GATGATTTTCGGAACACACAGAAAAGGGGAGAATCATTTGGAATCAGCAGAATAGGTAGCAAAATTAAAGGAGT  383

Query 1380  ATTCAAAAGTACCACAATGGAGGGAGCTATGTTGCCTAATTATGGTGTAGCTGAAGGTGAAGATGATTTTATTG  1453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  384  ATTCAAAAGTACCACAATGGAGGGAGCTATGTTGCCTAATTATGGTGTAGCTGAAGGTGAAGATGATTTTATTG  457

Query 1454  AAGAAGGTATTGTTGTAATGGAAGATGATTCTCCAGTGGAGGCTGTGAGCACACCTAATACTCCCCGAAACCTT  1527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  458  AAGAAGGTATTGTTGTAATGGAAGATGATTCTCCAGTGGAGGCTGTGAGCACACCTAATACTCCCCGAAACCTT  531

Query 1528  GCTGCATGGAAAATTAGCATTCCATATGTAGACTTTTTTGAGGATCCCTCCTCTGAAAGGAAGGAGAAAAAAGA  1601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  532  GCTGCATGGAAAATTAGCATTCCATATGTAGACTTTTTTGAGGATCCCTCCTCTGAAAGGAAGGAGAAAAAAGA  605

Query 1602  AAGAATTCCTGTGTTTTGTATTGATGTTGAAAGAAATGATAGAAGAGCAGTTGGACACGAGCCTGAACATTGGT  1675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  606  AAGAATTCCTGTGTTTTGTATTGATGTTGAAAGAAATGATAGAAGAGCAGTTGGACACGAGCCTGAACATTGGT  679

Query 1676  CTGTCTATAGAAGATATCTTGAATTCTATGTACTTGAATCAAAACTAACAGAATTTCATGGTGCATTTCCTGAT  1749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  680  CTGTCTATAGAAGATATCTTGAATTCTATGTACTTGAATCAAAACTAACAGAATTTCATGGTGCATTTCCTGAT  753

Query 1750  GCCCAGCTTCCTTCTAAGAGGATCATTGGCCCCAAAAATTATGAATTCTTAAAGTCAAAGAGGGAAGAGTTCCA  1823
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  754  GCCCAGCTTCCTTCTAAGAGGATCATTGGCCCCAAAAATTATGAATTCTTAAAGTCAAAGAGGGAAGAGTTCCA  827

Query 1824  AGAATATCTACAGAAACTTCTGCAGCATCCAGAACTGAGTAATAGTCAACTTCTGGCAGACTTTCTTTCCCCTA  1897
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  828  AGAATATCTACAGAAACTTCTGCAGCATCCAGAACTGAGTAATAGTCAACTTCTGGCAGACTTTCTTTCCCCTA  901

Query 1898  ATGGTGGGGAAACACAATTTCTTGATAAGATACTACCAGATGTAAATCTTGGGAAAATTATAAAATCTGTTCCT  1971
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  902  ATGGTGGGGAAACACAATTTCTTGATAAGATACTACCAGATGTAAATCTTGGGAAAATTATAAAATCTGTTCCT  975

Query 1972  GGAAAACTAATGAAAGAGAAAGGTCAGCATTTGGAACCTTTTATCATGAATTTCATTAATTCTTGTGAGTCTCC  2045
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  976  GGAAAACTAATGAAAGAGAAAGGTCAGCATTTGGAACCTTTTATCATGAATTTCATTAATTCTTGTGAGTCTCC  1049

Query 2046  AAAGCCTAAACCAAGTAGACCAGAACTGACCATTCTCAGCCCTACTTCAGAAAACAACAAGAAGCTTTTCAATG  2119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1050  AAAGCCTAAACCAAGTAGACCAGAACTGACCATTCTCAGCCCTACTTCAGAAAACAACAAGAAGCTTTTCAATG  1123

Query 2120  ATCTGTTTAAAAATAATGCAAACCGTGCTGAAAATACAGAGAGAAAGCAAAATCAGAATTATTTTATGGAGGTG  2193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1124  ATCTGTTTAAAAATAATGCAAACCGTGCTGAAAATACAGAGAGAAAGCAAAATCAGAATTATTTTATGGAGGTG  1197

Query 2194  ATGACTGTAGAAGGAGTCTATGATTACCTGATGTATGTAGGACGGGTAGTTTTCCAGGTTCCTGACTGGCTTCA  2267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198  ATGACTGTAGAAGGAGTCTATGATTACCTGATGTATGTAGGACGGGTAGTTTTCCAGGTTCCTGACTGGCTTCA  1271

Query 2268  TCATCTCTTAATGGGAACTCGAATCCTCTTTAAAAACACCCTGGAAATGTATACTGATTACTATCTTCAGTGTA  2341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1272  TCATCTCTTAATGGGAACTCGAATCCTCTTTAAAAACACCCTGGAAATGTATACTGATTACTATCTTCAGTGTA  1345

Query 2342  AACTAGAACAGCTATTTCAGGAGCACCGTTTGGTCTCACTCATAACACTTCTCAGAGATGCTATATTCTGTGAA  2415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1346  AACTAGAACAGCTATTTCAGGAGCACCGTTTGGTCTCACTCATAACACTTCTCAGAGATGCTATATTCTGTGAA  1419

Query 2416  AACACTGAACCTCGCTCTCTCCAAGATAAGCAAAAAGGAGCAAAACAGACTTTTGAAGAAATGATGAATTACAT  2489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1420  AACACTGAACCTCGCTCTCTCCAAGATAAGCAAAAAGGAGCAAAACAGACTTTTGAAGAAATGATGAATTACAT  1493

Query 2490  TCCAGATCTGTTAGTCAAGTGTATTGGTGAAGAAACCAAGTATGAAAGCATCAGACTTCTGTTTGATGGCTTAC  2563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494  TCCAGATCTGTTAGTCAAGTGTATTGGTGAAGAAACCAAGTATGAAAGCATCAGACTTCTGTTTGATGGCTTAC  1567

Query 2564  AGCAACCAGTACTCAACAAGCAGCTGACTTATGTTTTATTGGACATTGTGATACAGGAACTGTTTCCAGAGCTC  2637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1568  AGCAACCAGTACTCAACAAGCAGCTGACTTATGTTTTATTGGACATTGTGATACAGGAACTGTTTCCAGAGCTC  1641

Query 2638  AATAAGGTACAAAAGGAAGTTACCTCTGTGACATTTTGGATG  2679
            ||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1642  AATAAGGTACAAAAGGAAGTTACCTCTGTGACATCTTGGATG  1683

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