Nucleotide Global Alignment

Description

Query:
TRCN0000468783
Subject:
NM_001350553.1
Aligned Length:
2679
Identities:
1655
Gaps:
1023

Alignment

Query    1  ATGGTGCCCTGGGTGCGGACGATGGGGCAGAAGCTGAAGCAGCGGCTGCGACTGGACGTGGGACGCGAGATCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCGCCAGTACCCGCTGTTCTGCTTCCTGCTGCTCTGTCTCAGCGCCGCCTCCCTGCTTCTTAACAGGTATATTC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATATTTTAATGATCTTCTGGTCATTTGTTGCTGGAGTTGTCACATTCTACTGCTCACTAGGACCTGATTCTCTC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TTACCAAATATATTCTTCACAATAAAATACAAACCCAAGCAGTTAGGACTTCAGGAATTATTTCCTCAAGGTCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TAGCTGTGCTGTTTGTGGTAAAGTGAAATGTAAACGACATAGGCCTTCTTTGCTACTTGAAAACTACCAGCCAT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GGCTAGACCTGAAAATTTCTTCCAAGGTTGATGCATCTCTCTCAGAGGTGGATATTCCATCTATTATAACCAAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AAACTATTAAAAGCAGCAATGAAGCATATAGAAGTGATAGTTAAAGCCAGACAGAAAGTAAAAAATACAGAGTT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TTTACAGCAAGCTGCTTTAGAAGAATATGGTCCAGAGCTTCATGTTGCTTTGAGAAGTCGAAGAGATGAATTGC  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  ACTATTTAAGGAAACTTACTGAACTGCTTTTTCCTTATATTTTGCCTCCTAAAGCAACAGACTGCAGATCTCTG  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  ACCTTACTTATAAGAGAGATTCTGTCTGGCTCTGTGTTCCTTCCTTCTTTGGATTTCCTAGCTGATCCAGATAC  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  TGTGAATCATTTGCTTATCATCTTCATAGATGACAGTCCACCTGAAAAAGCAACTGAACCGGCTTCTCCTTTGG  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  TTCCATTCTTGCAGAAATTTGCAGAACCTAGAAATAAAAAGCCATCTGTGCTGAAGTTAGAATTGAAGCAAATC  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  AGAGAGCAACAAGATCTTTTATTTCGTTTTATGAACTTTCTGAAACAAGAAGGCGCAGTGCACGTGTTGCAGTT  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  TTGTTTGACTGTGGAGGAATTTAATGATAGAATTTTACGACCAGAATTATCAAATGATGAAATGCTGTCTCTTC  1036
                                                                         |||||||||||||
Sbjct    1  -------------------------------------------------------------ATGCTGTCTCTTC  13

Query 1037  ATGAAGAATTGCAGAAGATTTATAAAACATACTGTTTGGATGAAAGTATTGACAAAATTAGATTTGATCCCTTC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   14  ATGAAGAATTGCAGAAGATTTATAAAACATACTGTTTGGATGAAAGTATTGACAAAATTAGATTTGATCCCTTC  87

Query 1111  ATTGTAGAAGAGATTCAAAGAATTGCTGAAGGCCCATACATAGATGTTGTGAAACTTCAAACTATGAGATGTCT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   88  ATTGTAGAAGAGATTCAAAGAATTGCTGAAGGCCCATACATAGATGTTGTGAAACTTCAAACTATGAGATGTCT  161

Query 1185  TTTTGAAGCATATGAACATGTTCTTTCCCTTTTGGAGAATGTATTTACTCCTATGTTCTGCCATAGTGATGAGT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  162  TTTTGAAGCATATGAACATGTTCTTTCCCTTTTGGAGAATGTATTTACTCCTATGTTCTGCCATAGTGATGAGT  235

Query 1259  ATTTCAGACAACTTTTAAGAGGTGCAGAATCACCAACACGCAATTCAAAATTGAACAGGAACACACAGAAAAGG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  236  ATTTCAGACAACTTTTAAGAGGTGCAGAATCACCAACACGCAATTCAAAATTGAACAGGAACACACAGAAAAGG  309

Query 1333  GGAGAATCATTTGGAATCAGCAGAATAGGTAGCAAAATTAAAGGAGTATTCAAAAGTACCACAATGGAGGGAGC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  310  GGAGAATCATTTGGAATCAGCAGAATAGGTAGCAAAATTAAAGGAGTATTCAAAAGTACCACAATGGAGGGAGC  383

Query 1407  TATGTTGCCTAATTATGGTGTAGCTGAAGGTGAAGATGATTTTATTGAAGAAGGTATTGTTGTAATGGAAGATG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  384  TATGTTGCCTAATTATGGTGTAGCTGAAGGTGAAGATGATTTTATTGAAGAAGGTATTGTTGTAATGGAAGATG  457

Query 1481  ATTCTCCAGTGGAGGCTGTGAGCACACCTAATACTCCCCGAAACCTTGCTGCATGGAAAATTAGCATTCCATAT  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  458  ATTCTCCAGTGGAGGCTGTGAGCACACCTAATACTCCCCGAAACCTTGCTGCATGGAAAATTAGCATTCCATAT  531

Query 1555  GTAGACTTTTTTGAGGATCCCTCCTCTGAAAGGAAGGAGAAAAAAGAAAGAATTCCTGTGTTTTGTATTGATGT  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  532  GTAGACTTTTTTGAGGATCCCTCCTCTGAAAGGAAGGAGAAAAAAGAAAGAATTCCTGTGTTTTGTATTGATGT  605

Query 1629  TGAAAGAAATGATAGAAGAGCAGTTGGACACGAGCCTGAACATTGGTCTGTCTATAGAAGATATCTTGAATTCT  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  606  TGAAAGAAATGATAGAAGAGCAGTTGGACACGAGCCTGAACATTGGTCTGTCTATAGAAGATATCTTGAATTCT  679

Query 1703  ATGTACTTGAATCAAAACTAACAGAATTTCATGGTGCATTTCCTGATGCCCAGCTTCCTTCTAAGAGGATCATT  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  680  ATGTACTTGAATCAAAACTAACAGAATTTCATGGTGCATTTCCTGATGCCCAGCTTCCTTCTAAGAGGATCATT  753

Query 1777  GGCCCCAAAAATTATGAATTCTTAAAGTCAAAGAGGGAAGAGTTCCAAGAATATCTACAGAAACTTCTGCAGCA  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  754  GGCCCCAAAAATTATGAATTCTTAAAGTCAAAGAGGGAAGAGTTCCAAGAATATCTACAGAAACTTCTGCAGCA  827

Query 1851  TCCAGAACTGAGTAATAGTCAACTTCTGGCAGACTTTCTTTCCCCTAATGGTGGGGAAACACAATTTCTTGATA  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  828  TCCAGAACTGAGTAATAGTCAACTTCTGGCAGACTTTCTTTCCCCTAATGGTGGGGAAACACAATTTCTTGATA  901

Query 1925  AGATACTACCAGATGTAAATCTTGGGAAAATTATAAAATCTGTTCCTGGAAAACTAATGAAAGAGAAAGGTCAG  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  902  AGATACTACCAGATGTAAATCTTGGGAAAATTATAAAATCTGTTCCTGGAAAACTAATGAAAGAGAAAGGTCAG  975

Query 1999  CATTTGGAACCTTTTATCATGAATTTCATTAATTCTTGTGAGTCTCCAAAGCCTAAACCAAGTAGACCAGAACT  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  976  CATTTGGAACCTTTTATCATGAATTTCATTAATTCTTGTGAGTCTCCAAAGCCTAAACCAAGTAGACCAGAACT  1049

Query 2073  GACCATTCTCAGCCCTACTTCAGAAAACAACAAGAAGCTTTTCAATGATCTGTTTAAAAATAATGCAAACCGTG  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1050  GACCATTCTCAGCCCTACTTCAGAAAACAACAAGAAGCTTTTCAATGATCTGTTTAAAAATAATGCAAACCGTG  1123

Query 2147  CTGAAAATACAGAGAGAAAGCAAAATCAGAATTATTTTATGGAGGTGATGACTGTAGAAGGAGTCTATGATTAC  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1124  CTGAAAATACAGAGAGAAAGCAAAATCAGAATTATTTTATGGAGGTGATGACTGTAGAAGGAGTCTATGATTAC  1197

Query 2221  CTGATGTATGTAGGACGGGTAGTTTTCCAGGTTCCTGACTGGCTTCATCATCTCTTAATGGGAACTCGAATCCT  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198  CTGATGTATGTAGGACGGGTAGTTTTCCAGGTTCCTGACTGGCTTCATCATCTCTTAATGGGAACTCGAATCCT  1271

Query 2295  CTTTAAAAACACCCTGGAAATGTATACTGATTACTATCTTCAGTGTAAACTAGAACAGCTATTTCAGGAGCACC  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1272  CTTTAAAAACACCCTGGAAATGTATACTGATTACTATCTTCAGTGTAAACTAGAACAGCTATTTCAGGAGCACC  1345

Query 2369  GTTTGGTCTCACTCATAACACTTCTCAGAGATGCTATATTCTGTGAAAACACTGAACCTCGCTCTCTCCAAGAT  2442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1346  GTTTGGTCTCACTCATAACACTTCTCAGAGATGCTATATTCTGTGAAAACACTGAACCTCGCTCTCTCCAAGAT  1419

Query 2443  AAGCAAAAAGGAGCAAAACAGACTTTTGAAGAAATGATGAATTACATTCCAGATCTGTTAGTCAAGTGTATTGG  2516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1420  AAGCAAAAAGGAGCAAAACAGACTTTTGAAGAAATGATGAATTACATTCCAGATCTGTTAGTCAAGTGTATTGG  1493

Query 2517  TGAAGAAACCAAGTATGAAAGCATCAGACTTCTGTTTGATGGCTTACAGCAACCAGTACTCAACAAGCAGCTGA  2590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494  TGAAGAAACCAAGTATGAAAGCATCAGACTTCTGTTTGATGGCTTACAGCAACCAGTACTCAACAAGCAGCTGA  1567

Query 2591  CTTATGTTTTATTGGACATTGTGATACAGGAACTGTTTCCAGAGCTCAATAAGGTACAAAAGGAAGTTACCTCT  2664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1568  CTTATGTTTTATTGGACATTGTGATACAGGAACTGTTTCCAGAGCTCAATAAGGTACAAAAGGAAGTTACCTCT  1641

Query 2665  GTGACATTTTGGATG  2679
            |||||||.|||||||
Sbjct 1642  GTGACATCTTGGATG  1656

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