Nucleotide Global Alignment

Description

Query:
TRCN0000468851
Subject:
XM_017313621.1
Aligned Length:
3234
Identities:
2423
Gaps:
453

Alignment

Query    1  ATGGCGGCTGCGCCGGCCTTGAAGCACTGGCGCACCACGCTGGAGCGGGTGGAGAAGTTCGTGTCGCCGCTCTA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTTTACCGACTGTAACCTCCGCGGCAGGCTTTTTGGGGCCAGCTGCCCTGTGGCTGTGCTCTCCAGCTTCCTGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CGCCGGAGAGACTTCCCTACCAGGAGGCAGTCCAGCGGGACTTCCGCCCCGCGCAGGTCGGCGACAGCTTCGGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CCCACATGGTGGACCTGCTGGTTCCGGGTGGAGCTGACCATCCCAGAGGCATGGGTGGGCCAGGAAGTTCACCT  296
                                                              |||||.|||               
Sbjct    1  --------------------------------------------------ATGGGGGGG---------------  9

Query  297  TTGCTGGGAAAGTGATGGAGAAGGTCTGGTGTGGCGTGATGGAGAACCTG---TCCAGGGTTTAACCAAAGAGG  367
              |..|||.||.|      |||.|.|||.|               ||.||   ||                   
Sbjct   10  --GGGGGGCAACT------GAATGCCTGCT---------------ACTTGCACTC-------------------  41

Query  368  GTGAGAAG--ACCAGCTATGTCCTG-------ACTGACAGGCTGGGGGAAAGA--GACCCCCGA-------AGC  423
            .||..|||  .||||| ||.|.|||       ||||   |.|||      |||  |.|.|.|.|       |||
Sbjct   42  TTGTCAAGCTCCCAGC-ATCTTCTGCCAGTTCACTG---GCCTG------AGACTGCCTCTCTATATTTATAGC  105

Query  424  CTCACTCTCTATGTGGAAGTAGCCTGCAATGGGCTCCTGGGGGCCGGGAAGGGAAGCATGATTGCAGCCCCTGA  497
            .|.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||
Sbjct  106  TTGACTCTCTATGTGGAAGTAGCCTGCAATGGGCTTCTGGGGGCCGGGAAGGGAAGCATGATCGCAGCCCCTGA  179

Query  498  CCCTGAGAAGATGTTCCAGCTGAGCCGGGCTGAGCTAGCTGTGTTCCACCGGGATGTCCACATGCTCCTGGTGG  571
            |||.||||||||||||||||||||||.||||.|.||.|||||||||||||||||||||||||..||||||||||
Sbjct  180  CCCAGAGAAGATGTTCCAGCTGAGCCAGGCTAAACTGGCTGTGTTCCACCGGGATGTCCACAGTCTCCTGGTGG  253

Query  572  ATCTGGAGCTGCTGCTGGGCATAGCCAAGGGCCTCGGGAAGGACAACCAGCGCAGCTTCCAGGCCCTGTACACA  645
            |.|||||||||.|||||||..|.|||||||||||||||.||||||.||||||||||||||||||||||.|||||
Sbjct  254  ACCTGGAGCTGTTGCTGGGTGTGGCCAAGGGCCTCGGGGAGGACAGCCAGCGCAGCTTCCAGGCCCTGCACACA  327

Query  646  GCCAATCAGATGGTGAACGTGTGTGACCCTGCCCAGCCCGAGACCTTCCCAGTGGCCCAGGCCCTGGCCTCCAG  719
            |||||.||||||||||||.|.|||||||||||.|||||.|||||.|.|||||..|||.|.|||||||||||||.
Sbjct  328  GCCAACCAGATGGTGAACATATGTGACCCTGCTCAGCCTGAGACTTACCCAGCAGCCAAAGCCCTGGCCTCCAA  401

Query  720  GTTCTTTGGCCAACATGGGGGTGAAAGCCAACACACCATTCATGCCACAGGGCACTGCCACATTGATACAGCCT  793
            ||||||||||||||||||.|||||||||||.||.|||||.|||||||..||.|||||.||||||||||||||||
Sbjct  402  GTTCTTTGGCCAACATGGAGGTGAAAGCCAGCATACCATCCATGCCATGGGACACTGTCACATTGATACAGCCT  475

Query  794  GGCTTTGGCCCTTCAAAGAGACTGTGAGGAAATGTGCCCGGAGCTGGGTGACCGCCCTGCAGCTCATGGAGCGG  867
            ||||||||||||||||.||||||||||||||||||||||||||||||..|||.||..||..|||||||||||.|
Sbjct  476  GGCTTTGGCCCTTCAAGGAGACTGTGAGGAAATGTGCCCGGAGCTGGTCGACAGCTGTGACGCTCATGGAGCAG  549

Query  868  AACCCTGAGTTCATCTTTGCCTGCTCCCAGGCGCAGCAGCTGGAATGGGTGAAGAGCCGCTACCCTGGCCTGTA  941
            |||.|.||.|||||||||||||||||.|||||.||.||.||.||||||||.|||||||..||||||||.|||.|
Sbjct  550  AACACAGACTTCATCTTTGCCTGCTCTCAGGCACAACAACTTGAATGGGTCAAGAGCCAGTACCCTGGTCTGCA  623

Query  942  CTCCCGCATCCAGGAGTTTGCGTGCCGTGGGCAGTTTGTGCCTGTGGGGGGCACCTGGGTGGAGATGGATGGGA  1015
            ..||||..|||||||||||||.|||||.||.|||||||||||||||||||||||||||||.||.||||||||||
Sbjct  624  TGCCCGGCTCCAGGAGTTTGCCTGCCGAGGACAGTTTGTGCCTGTGGGGGGCACCTGGGTAGAAATGGATGGGA  697

Query 1016  ACCTGCCCAGTGGAGAGGCCATGGTGAGGCAGTTTTTGCAGGGCCAGAACTTCTTTCTGCAGGAGTTTGGGAAG  1089
            ||||.|||||||||||||||||||||||||||||..|||||||||||||||||||||||||.||||||||||||
Sbjct  698  ACCTTCCCAGTGGAGAGGCCATGGTGAGGCAGTTCCTGCAGGGCCAGAACTTCTTTCTGCAAGAGTTTGGGAAG  771

Query 1090  ATGTGCTCTGAGTTCTGGCTGCCGGACACCTTTGGCTACTCAGCACAGCTCCCCCAGATCATGCACGGCTGTGG  1163
            |||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||||
Sbjct  772  ATGTGCTCTGAGTTCTGGCTGCCAGACACGTTTGGCTACTCAGCACAGCTCCCCCAGATCATGCAAGGCTGTGG  845

Query 1164  CATCAGGCGCTTTCTCACCCAGAAATTGAGCTGGAATTTGGTGAACTCCTTCCCACACCATACATTTTTCTGGG  1237
            |||||.||||||.||.|||||||||.||||||||||.|||||.||||||||.|||||||||||.||||||||||
Sbjct  846  CATCAAGCGCTTCCTGACCCAGAAACTGAGCTGGAACTTGGTCAACTCCTTTCCACACCATACCTTTTTCTGGG  919

Query 1238  AGGGCCTGGATGGCTCCCGTGTACTGGTCCACTTCCCACCTGGCGACTCCTATGGGATGCAGGGCAGCGTGGAG  1311
            ||||.||||||||||||||.||.||||||||||||||||||||.|||||.|||||.|||||||||||.||||||
Sbjct  920  AGGGGCTGGATGGCTCCCGAGTGCTGGTCCACTTCCCACCTGGAGACTCATATGGAATGCAGGGCAGTGTGGAG  993

Query 1312  GAGGTGCTGAAGACCGTGGCCAACAACCGGGACAAGGGGCGGGCCAACCACAGTGCCTTCCTCTTTGGCTTTGG  1385
            ||||||||||||||.|||.|||||||||||||||||||||||.||||||||||||.|||||||||.|||||.||
Sbjct  994  GAGGTGCTGAAGACTGTGACCAACAACCGGGACAAGGGGCGGACCAACCACAGTGGCTTCCTCTTCGGCTTCGG  1067

Query 1386  GGATGGGGGTGGTGGCCCCACCCAGACCATGCTGGACCGCCTGAAGCGCCTGAGCAATACGGATGGGCTGCCCA  1459
            |||||||||.|||||||||||.|||||||||.|||||||..|||||||.||||||||.||.|||||||||||||
Sbjct 1068  GGATGGGGGAGGTGGCCCCACACAGACCATGTTGGACCGATTGAAGCGGCTGAGCAACACTGATGGGCTGCCCA  1141

Query 1460  GGGTGCAGCTATCTTCTCCAAGACAGCTCTTCTCAGCACTGGAGAGTGACTCAGAGCAGCTGTGCACGTGGGTT  1533
            |||||||||||||||||||..|.|||||||||.|.|||||||||||.|||||||..|||||||||||.||||||
Sbjct 1142  GGGTGCAGCTATCTTCTCCTGGCCAGCTCTTCACGGCACTGGAGAGAGACTCAGGACAGCTGTGCACATGGGTT  1215

Query 1534  GGGGAGCTCTTCTTGGAGCTGCACAATGGCACATACACCACCCATGCCCAGATCAAGAAGGGGAACCGGGAATG  1607
            ||.||.||||||.||||.||||||||||||||.|||||.||.|||||||||.||||||||||||||.|.|||||
Sbjct 1216  GGAGAACTCTTCCTGGAACTGCACAATGGCACCTACACTACGCATGCCCAGCTCAAGAAGGGGAACAGAGAATG  1289

Query 1608  TGAGCGGATCCTGCACGACGTGGAGCTGCTCAGTAGCCTGGCCCTGGCCCGCAGTGCCCAGTTCCTATACCCAG  1681
            |||||.|||.||.||.|||||||||.|||||||.|||||||||||.|||||.||||||||||||||||||||.|
Sbjct 1290  TGAGCAGATTCTTCATGACGTGGAGGTGCTCAGCAGCCTGGCCCTAGCCCGAAGTGCCCAGTTCCTATACCCGG  1363

Query 1682  CAGCCCAGCTGCAGCACCTCTGGAGGCTCCTTCTTCTGAACCAGTTCCATGATGTGGTGACTGGAAGCTGCATC  1755
            |||||||||||||||||||||||||||||||.||.||.|||||||||||||||||||||||||||||||||||.
Sbjct 1364  CAGCCCAGCTGCAGCACCTCTGGAGGCTCCTGCTCCTCAACCAGTTCCATGATGTGGTGACTGGAAGCTGCATT  1437

Query 1756  CAGATGGTGGCAGAGGAAGCCATGTGCCATTATGAAGACATCCGTTCCCATGGCAATACACTGCTCAGCGCTGC  1829
            |||.||||||||||.||.||||||..|.|.|||||||||||||||||.||||||||..||||||||||.|||||
Sbjct 1438  CAGCTGGTGGCAGAAGATGCCATGAACTACTATGAAGACATCCGTTCTCATGGCAACCCACTGCTCAGTGCTGC  1511

Query 1830  AGCCGCAGCCCTGTGTGCTGGGGAGCCAGGTCCTGAGGGCCTCCTCATCGTCAACACACTGCCCTGGAAGCGGA  1903
            ||||||||||.|||||||.||||||||||||||..|||||||||||||..||||||||||||||||||||||.|
Sbjct 1512  AGCCGCAGCCTTGTGTGCCGGGGAGCCAGGTCCCAAGGGCCTCCTCATTATCAACACACTGCCCTGGAAGCGCA  1585

Query 1904  TCGAAGTGATGGCCCTGCCCAAACCGGGCGGGGCCCACAGCCTAGCCCTGGTGACAGTGCCCAGCATGGGCTAT  1977
            ..||||||.||||.||||||||.||..|.|||||.||||||||||||||||||||||||||.||.||.|||||.
Sbjct 1586  CTGAAGTGTTGGCACTGCCCAAGCCTTGTGGGGCTCACAGCCTAGCCCTGGTGACAGTGCCAAGTATTGGCTAC  1659

Query 1978  GCTCCTGTTCCTCCCCCCACCTCACTGCAGCCCCTGCTGCCCCAGCAGCCTGTGTTCGTAGTGCAAGAGACTGA  2051
            |||||||.|||..||||.||.||||||||||||||.||.|||||||||||||||||.||..||||.||||||||
Sbjct 1660  GCTCCTGCTCCCACCCCTACTTCACTGCAGCCCCTCCTCCCCCAGCAGCCTGTGTTTGTGATGCAGGAGACTGA  1733

Query 2052  TGGCTCCGTGACTCTGGACAATGGCATCATCCGAGTGAAGCTGGACCCAACTGGTCGCCTGACGTCCTTGGTCC  2125
            .||.||.||||||.|||||||.|||||||||||.||||..|||||.||||||||..|.||.||.|||.||||||
Sbjct 1734  CGGTTCTGTGACTTTGGACAACGGCATCATCCGGGTGAGACTGGATCCAACTGGCTGTCTTACCTCCCTGGTCC  1807

Query 2126  TGGTGGCCTCTGGCAGGGAGGCCATTGCTGAGGGCGCCGTGGGGAACCAGTTTGTGCTATTTGATGATGTCCCC  2199
            |||||||.|||||||||||.||||||||||||||.|||.|||||||||||||||||.|.|||||||||||.||.
Sbjct 1808  TGGTGGCTTCTGGCAGGGAAGCCATTGCTGAGGGAGCCCTGGGGAACCAGTTTGTGTTGTTTGATGATGTGCCA  1881

Query 2200  TTGTACTGGGATGCATGGGACGTCATGGACTACCACCTGGAGACACGGAAGCCTGTGCTGGGCCAGGCAGGGAC  2273
            ||||||||||||||||||||.||||||||.|||||.||.|||||||||||||||||||||||||||||||||||
Sbjct 1882  TTGTACTGGGATGCATGGGATGTCATGGATTACCATCTAGAGACACGGAAGCCTGTGCTGGGCCAGGCAGGGAC  1955

Query 2274  CCTGGCAGTGGGCACCGAGGGCGGCCTGCGGGGCAGCGCCTGGTTCTTGCTACAGATCAGCCCCAACAGTCGGC  2347
            |||||||||||||||.||.||.|||||.||||||||.|||||||||.||||.|||||||||||||||||.||||
Sbjct 1956  CCTGGCAGTGGGCACTGAAGGTGGCCTCCGGGGCAGTGCCTGGTTCCTGCTCCAGATCAGCCCCAACAGCCGGC  2029

Query 2348  TTAGCCAGGAGGTTGTGCTGGACGTTGGCTGCCCCTATGTCCGCTTCCACACCGAGGTACACTGGCATGAGGCC  2421
            |.|||||||||||||||||.||.|||||||||||||||||||||||||||||.|||||.||||||||.||||||
Sbjct 2030  TCAGCCAGGAGGTTGTGCTAGATGTTGGCTGCCCCTATGTCCGCTTCCACACTGAGGTGCACTGGCACGAGGCC  2103

Query 2422  CACAAGTTCCTGAAGGTGGAGTTCCCTGCTCGCGTGCGGAGTTCCCAGGCCACCTATGAGATCCAGTTTGGGCA  2495
            ||||||||||||||||||||||||||||||.|..|.|||||..|||||||.|||||||||||||||||||||||
Sbjct 2104  CACAAGTTCCTGAAGGTGGAGTTCCCTGCTAGAATACGGAGCCCCCAGGCTACCTATGAGATCCAGTTTGGGCA  2177

Query 2496  CCTGCAGCGACCTACCCACTACAATACCTCTTGGGACTGGGCTCGATTTGAGGTGTGGGCCCATCGCTGGATGG  2569
            |||.|||.|.||.||.|||.||||.||||||||||||||||||||.|..|||||||||||.||.||||||||.|
Sbjct 2178  CCTCCAGAGGCCGACGCACAACAACACCTCTTGGGACTGGGCTCGCTACGAGGTGTGGGCTCACCGCTGGATAG  2251

Query 2570  ATCTGTCAGAACACGGCTTTGGGCTGGCCCTGCTCAACGACTGCAAGTATGGCGCGTCAGTGCGAGGCAGCATC  2643
            |||||||.||....|.||||||||||||||||||||||.|||||||||||||.||.|||||.|||||||.|.||
Sbjct 2252  ATCTGTCCGAGTGTGACTTTGGGCTGGCCCTGCTCAACAACTGCAAGTATGGAGCATCAGTACGAGGCAACGTC  2325

Query 2644  CTCAGCCTCTCGCTCTTGCGGGCGCCTAAAGCCCCGGACGCTACTGCTGACACGGGGCGCCACGAGTTCACCTA  2717
            |||||||||||.||.|||||.||.||.||.||.||.||||||||||||||||.|||||||||.||.|||||.||
Sbjct 2326  CTCAGCCTCTCACTGTTGCGTGCACCCAAGGCTCCAGACGCTACTGCTGACATGGGGCGCCATGAATTCACTTA  2399

Query 2718  TGCACTGATGCCGCACAAGGGCTCTTTCCAGGATGCTGGCGTTATCCAAGCTGCCTACAGCCTAAACTTCCCCC  2791
            .||..|||||||.|||||||||||.|||||.||.|||||.||.|||||.||||||||||.|||.|||||.||||
Sbjct 2400  CGCTTTGATGCCACACAAGGGCTCCTTCCAAGAAGCTGGTGTCATCCATGCTGCCTACAACCTCAACTTTCCCC  2473

Query 2792  TGTTGGCTCTGCCAGCCCCCAGCCCAGCGCCCGCCACCTCCTGGAGTGCGTTTTCCGTGTCTTCACCCGCGGTC  2865
            ||.||||.|||||.||.||..||||.||.||.|.||||.||||||||||.|||||.|||||||||||.||.||.
Sbjct 2474  TGCTGGCACTGCCGGCTCCAGGCCCGGCCCCTGACACCACCTGGAGTGCCTTTTCTGTGTCTTCACCAGCAGTA  2547

Query 2866  GTATTGGAGACCGTCAAGCAGGC---GGAGA--------------------------------------GCA--  2896
            ||..||||||||.||||||||||   |||||                                      |||  
Sbjct 2548  GTGCTGGAGACCATCAAGCAGGCAAGGGAGAATAGACTGGGGAGAATAGACTGGGGAGGCTCCTGGGGTGCACA  2621

Query 2897  --------------------------------------------------GCCCCCAGCGCCGCTCGCTGGTCC  2920
                                                              |||..||||.||||.|.|||||.|
Sbjct 2622  AGTTCTTGGCCCTGCCCACTGTCCTGCCTTCCTCCACCAGGCTGAGAGGTGCCATCAGCACCGCACACTGGTTC  2695

Query 2921  TGAGGCTGTATGAGGCCCACGGCAGCCACGTGGACTGCTGGCTGCACTTGTCGCTGCCGGTTCAGGAGGCCATC  2994
            |.||||||||.|||||.||.||||||||.||||||||||||||||||..||||.||||.|||||||||||||.|
Sbjct 2696  TAAGGCTGTACGAGGCTCATGGCAGCCATGTGGACTGCTGGCTGCACACGTCGTTGCCTGTTCAGGAGGCCACC  2769

Query 2995  CTCTGCGATCTCTTGGAGCGACCAGACCCTGCTGGCCACTTGACCCTTCGGGACAACCGCCTGAAGCTCACCTT  3068
            ||.||.||.|||.||||||..|.||||||..||||.|||.|..||||.|.|||||||||.|||||||||||.||
Sbjct 2770  CTTTGTGACCTCCTGGAGCAGCGAGACCCCACTGGTCACCTTTCCCTCCAGGACAACCGTCTGAAGCTCACTTT  2843

Query 3069  TTCTCCCTTCCAAGTGCTGTCCCTGTTGCTCGTGCTTCAGCCTCCGCCACAC  3120
            ||||||||||||||||...|||||.|||||.|||||||||.||||.|||.||
Sbjct 2844  TTCTCCCTTCCAAGTGAGATCCCTATTGCTTGTGCTTCAGTCTCCACCAAAC  2895

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