Nucleotide Global Alignment

Description

Query:
TRCN0000468890
Subject:
NM_028136.2
Aligned Length:
3028
Identities:
2593
Gaps:
116

Alignment

Query    1  ATGAGTTATGACTACCATCAGAACTGGGGCCGTGATGGGGGTCCCCGCAGCTCCGGTGGGGGCTATGGAGGGGG  74
            |||||.||.|||||.|||||||.||||.||||.||||||||.||.||..|||||||...|||||          
Sbjct    1  ATGAGCTACGACTATCATCAGAGCTGGAGCCGCGATGGGGGCCCACGGGGCTCCGGCCAGGGCT----------  64

Query   75  GCCAGCAG----GGGGTCATGGAGGTAACCGAGGCTCCGGAGGAGGCGGCGGCGGCGGAGGGGGTGGTCGAGGC  144
             |||||.|    ||.|.|  |||||.|.|||.|||||         .|||||||||||||||   ||.||.|||
Sbjct   65  -CCAGCGGCGGCGGCGGC--GGAGGGAGCCGGGGCTC---------GGGCGGCGGCGGAGGG---GGCCGCGGC  123

Query  145  GGCAGGGGCCGGCATCCCGGGCACCTGAAAGGCCGCGAAATCGGCATGTGGTACGCGAAAAAACAGGGGCAGAA  218
            |||.|||||||||||||||..|||||.||.||.|||||.||||||.||||||||||.||.||.|||..||||||
Sbjct  124  GGCCGGGGCCGGCATCCCGCACACCTTAAGGGTCGCGAGATCGGCCTGTGGTACGCCAAGAAGCAGACGCAGAA  197

Query  219  GAACAAGGAAGCGGAGAGGCAAGAGAGAGCTGTAGTACACATGGATGAACGACGAGAAGAACAAATTGTACAGT  292
            |||||||||.||.||||||||.||||||||||||||.||||||||||||||.||||||||.||||||||.|||.
Sbjct  198  GAACAAGGAGGCTGAGAGGCAGGAGAGAGCTGTAGTGCACATGGATGAACGTCGAGAAGAGCAAATTGTGCAGC  271

Query  293  TACTGAATTCTGTTCAAGCGAAGAATGATAAAGAGTCAGAAGCACAGATATCCTGGTTTGCTCCTGAGGATCAT  366
            |.||||||||.||.|||||.||||.|||.|||||.||||||||.||||||||||||||||||||||||||||||
Sbjct  272  TGCTGAATTCAGTCCAAGCTAAGACTGACAAAGATTCAGAAGCGCAGATATCCTGGTTTGCTCCTGAGGATCAT  345

Query  367  GGATACGGTACTGAAGTTTCTACTAAGAACACACCATGCTCAGAGAACAAACTTGACATCCAGGAAAAGAAGTT  440
            ||.||.|||||||||||||||.|..||||.|.|..|..|||||||||.||||||||||.||||||||||||.||
Sbjct  346  GGGTATGGTACTGAAGTTTCTTCAGAGAAAAAAATAAACTCAGAGAAGAAACTTGACAACCAGGAAAAGAAATT  419

Query  441  GATAAATCAAGAAAAAAAAATGTTTAGAATCAGGAACAGATCATATATTGACCGAGATTCTGAGTATCTCTTGC  514
            |.||||.|||||||||||.|..|||||.||||...|||.||||||||||||||||||||||||||||.|.||||
Sbjct  420  GCTAAACCAAGAAAAAAAGACATTTAGGATCACAGACAAATCATATATTGACCGAGATTCTGAGTATTTATTGC  493

Query  515  AAGAAAATGAACCAGATGGAACTTTAGACCAAAAATTATTGGAAGATTTACAAAAGAAAAAAAATGACCTTCGG  588
            ||||||||||.|||.|...||..|||||.|||.|.|||.|||||||||||||||.||||||||.|||||.|||.
Sbjct  494  AAGAAAATGAGCCAAACCTAAGCTTAGATCAACATTTACTGGAAGATTTACAAAGGAAAAAAACTGACCCTCGA  567

Query  589  TATATTGAAATGCAGCATTTCAGAGAAAAGCTGCCTTCGTATGGAATGCAAAAGGAATTGGTAAATTTAATTGA  662
            |||||.||.|||||||.|||||||.|||||||||||||.|||||||||||.|||||..||||||||.||||..|
Sbjct  568  TATATAGAGATGCAGCGTTTCAGAAAAAAGCTGCCTTCATATGGAATGCAGAAGGAGCTGGTAAATCTAATCAA  641

Query  663  TAACCATCAGGTAACAGTAATAAGTGGTGAAACTGGTTGTGGCAAAACCACTCAAGTTACTCAGTTCATTTTGG  736
            ||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||.||||||||.||||
Sbjct  642  TAACCATCAGGTGACAGTAATAAGTGGTGAAACTGGTTGTGGCAAAACCACTCAGGTTACGCAGTTCATCTTGG  715

Query  737  ATAACTACATTGAAAGAGGAAAAGGATCTGCTTGCAGAATAGTTTGTACTCAGCCAAGAAGAATTAGTGCCATT  810
            ||||||||||.||||||||||||||.|||||.|||||||||||.|||||||||||.||||||||||||||||||
Sbjct  716  ATAACTACATCGAAAGAGGAAAAGGGTCTGCCTGCAGAATAGTGTGTACTCAGCCGAGAAGAATTAGTGCCATT  789

Query  811  TCAGTTGCGGAAAGAGTAGCTGCAGAAAGGGCAGAATCTTGTGGCAGTGGTAATAGTACTGGATATCAAATTCG  884
            |||||.||.||.|||||.||..|||||||||||||.||||||||||.||||||||||||||||||.||.|||||
Sbjct  790  TCAGTCGCTGAGAGAGTGGCCACAGAAAGGGCAGAGTCTTGTGGCAATGGTAATAGTACTGGATACCAGATTCG  863

Query  885  TCTCCAGAGTCGGTTGCCAAGGAAACAGGGTTCTATCTTATACTGTACAACAGGAATCATCCTTCAGTGGCTCC  958
            |||.||.||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||||||||||
Sbjct  864  TCTTCAAAGTCGGTTGCCAAGGAAACAAGGTTCTATCTTATACTGCACAACAGGAATCATTCTTCAGTGGCTCC  937

Query  959  AGTCAGACCCGTATTTGTCCAGTGTTAGTCATATCGTACTTGATGAAATCCATGAAAGAAATCTGCAGTCAGAT  1032
            ||||.|||.|...|||||||||||||||||||||.||||||||||||||.||||||||.|||||.|||||.|||
Sbjct  938  AGTCCGACTCACGTTTGTCCAGTGTTAGTCATATTGTACTTGATGAAATTCATGAAAGGAATCTACAGTCGGAT  1011

Query 1033  GTTTTAATGACTGTTGTTAAAGACCTTCTCAATTTTCGATCTGACTTGAAAGTAATATTGATGAGTGCAACATT  1106
            |||||||||||||||.|||||||.||||||.|||||||||||||..|.|||||||||||||||||||||||.||
Sbjct 1012  GTTTTAATGACTGTTATTAAAGATCTTCTCCATTTTCGATCTGATCTCAAAGTAATATTGATGAGTGCAACTTT  1085

Query 1107  GAATGCAGAAAAGTTTTCAGAATATTTTGGTAACTGTCCAATGATACATATACCTGGTTTTACCTTTCCGGTTG  1180
            ||||||.||.||.|||||||||||||||||||||||||||||||||||||||||.||.|||||.|||||.||||
Sbjct 1086  GAATGCTGAGAAATTTTCAGAATATTTTGGTAACTGTCCAATGATACATATACCCGGGTTTACTTTTCCAGTTG  1159

Query 1181  TGGAATATCTTTTGGAAGATGTAATTGAAAAAATAAGGTATGTTCCAGAACAAAAAGAACACAGATGCCAGTTT  1254
            ||||||||||||||||||||.|.||||||||||||||.|||||||||||.|||||||||||.||||.||||||.
Sbjct 1160  TGGAATATCTTTTGGAAGATATCATTGAAAAAATAAGATATGTTCCAGACCAAAAAGAACATAGATCCCAGTTC  1233

Query 1255  AAGAGGGGTTTCATGCAAGGGCATGTAAATAGACAAGAAAAAGAAGAAAAAGAAGCAATATATAAAGAACGTTG  1328
            |||||||||||||||||.||.||||||||||||||||||||||||||||||||.||.||.|||||.|||||.||
Sbjct 1234  AAGAGGGGTTTCATGCAGGGTCATGTAAATAGACAAGAAAAAGAAGAAAAAGAGGCCATCTATAAGGAACGCTG  1307

Query 1329  GCCAGATTATGTAAGGGAACTGCGAAGAAGGTATTCTGCAAGTACTGTAGATGTTATAGAAATGATGGAGGATG  1402
            |||||..|||.|||.|||||||||.|.|||.||.|||||||||||.|||||||||.|..||||||||||.||||
Sbjct 1308  GCCAGCGTATATAAAGGAACTGCGGACAAGATACTCTGCAAGTACCGTAGATGTTTTGCAAATGATGGATGATG  1381

Query 1403  ATAAAGTTGATCTGAATTTGATTGTTGCCCTCATCCGATACATTGTTTTGGAAGAAGAGGATGGTGCGATACTG  1476
            ||||||||||||||||||||||||.||||||.||.||||||||||||||||||||||||||||||||.|||.||
Sbjct 1382  ATAAAGTTGATCTGAATTTGATTGCTGCCCTTATTCGATACATTGTTTTGGAAGAAGAGGATGGTGCAATATTG  1455

Query 1477  GTCTTTCTGCCAGGCTGGGACAATATCAGCACTTTACATGATCTCTTGATGTCACAAGTAATGTTTAAATCAGA  1550
            ||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||||||.||||||||||||||
Sbjct 1456  GTCTTTCTACCAGGCTGGGACAATATCAGTACTTTGCATGATCTCTTGATGTCACAAGTGATGTTTAAATCAGA  1529

Query 1551  TAAATTTTTAATTATACCTTTACATTCACTGATGCCTACAGTTAACCAGACACAGGTGTTTAAAAGAACCCCTC  1624
            |||.|||.|.|||||||||||||||||||||||||||||.||.||||||||||||||.|||||||.|||.||||
Sbjct 1530  TAAGTTTCTCATTATACCTTTACATTCACTGATGCCTACCGTCAACCAGACACAGGTATTTAAAAAAACTCCTC  1603

Query 1625  CTGGTGTTCGGAAAATAGTAATTGCTACCAACATTGCGGAGACTAGCATTACCATAGATGATGTCGTTTATGTG  1698
            |.|||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||.||||||||.
Sbjct 1604  CCGGTGTTCGGAAAATAGTAATTGCTACCAACATTGCAGAGACTAGCATCACCATAGATGATGTGGTTTATGTA  1677

Query 1699  ATAGATGGAGGAAAAATAAAAGAGACGCATTTTGATACTCAGAACAATAACAGTACAATGTCCGCTGAGTGGGT  1772
            |||||||||||||||||.|||||.||.||.|||||.||.||||||||.|.||||||.|||||.|||||||||||
Sbjct 1678  ATAGATGGAGGAAAAATTAAAGAAACACACTTTGACACACAGAACAACATCAGTACCATGTCTGCTGAGTGGGT  1751

Query 1773  TAGTAAAGCTAATGCCAAACAGAGAAAAGGTCGAGCTGGAAGAGTTCAACCTGGTCATTGCTATCATCTGTATA  1846
            ||||||||||||||||||||||||.|||||..||||||||||||||||.|||||||||||.|||||||||||||
Sbjct 1752  TAGTAAAGCTAATGCCAAACAGAGGAAAGGGAGAGCTGGAAGAGTTCAGCCTGGTCATTGTTATCATCTGTATA  1825

Query 1847  ATGGTCTTAGAGCAAGTCTTCTAGATGACTATCAACTGCCAGAAATTTTGAGAACTCCTTTGGAAGAACTTTGT  1920
            |||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.|||
Sbjct 1826  ATGGTCTTAGAGCAAGTCTTCTAGATGACTACCAACTACCAGAAATTTTGAGAACTCCTTTGGAAGAACTCTGT  1899

Query 1921  TTACAAATAAAGATTTTAAGGCTAGGTGGAATTGCTTATTTTCTGAGTAGATTAATGGACCCACCATCAAATGA  1994
            ||.|||||||||||.||.|||||.|||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1900  TTGCAAATAAAGATCTTGAGGCTGGGTGGAATTGCTTATTTTCTGAGTAGATTAATGGATCCACCATCAAATGA  1973

Query 1995  GGCAGTGTTACTCTCCATAAGACACCTGATGGAGCTGAACGCTTTGGATAAACAAGAAGAATTGACACCTCTTG  2068
            |||||||.|.||||||||||.||||||.|||||.||||..|||||||||||.|||||||||||.||||||||||
Sbjct 1974  GGCAGTGGTGCTCTCCATAAAACACCTAATGGAACTGAGTGCTTTGGATAAGCAAGAAGAATTAACACCTCTTG  2047

Query 2069  GAGTCCACTTGGCACGATTACCCGTTGAGCCACATATTGGAAAAATGATTCTTTTTGGAGCACTGTTCTGCTGC  2142
            |.|||||.||.||.|||.|.||.|||||||||||||||||||||||||||||.||||||||..|||||||||||
Sbjct 2048  GTGTCCATTTAGCCCGACTGCCTGTTGAGCCACATATTGGAAAAATGATTCTCTTTGGAGCTTTGTTCTGCTGC  2121

Query 2143  TTAGACCCAGTACTCACTATTGCTGCTAGTCTCAGTTTCAAAGATCCATTTGTCATTCCACT------------  2204
            |||||.|||||.|||||.||||||||.||||||||.||.||||||||.||||||||||||.|            
Sbjct 2122  TTAGATCCAGTTCTCACCATTGCTGCCAGTCTCAGCTTTAAAGATCCCTTTGTCATTCCATTGGGAAAAGAAAA  2195

Query 2205  --------------------------------------------------------------------------  2204
                                                                                      
Sbjct 2196  GATTGCAGATGCAAGAAGAAAAGAACTGGCAAAGGAAACTAGAAGTGATCACCTGACAGTTGTGAATGCATTTG  2269

Query 2205  -GGGCTGGGAAGAGGCTAGGCGACGTGGTTTCAGATACGAAAAGGACTATTGCTGGGAATATTTTCTGTCTTCA  2277
             ||||||||||||.||.|..||||||||||||||.||.|||||||||||.|||||||||||||||||||||||.
Sbjct 2270  AGGGCTGGGAAGAAGCCAAACGACGTGGTTTCAGGTATGAAAAGGACTACTGCTGGGAATATTTTCTGTCTTCG  2343

Query 2278  AACACACTGCAGATGCTGCATAACATGAAAGGACAGTTTGCTGAGCATCTTCTTGGAGCTGGATTTGTAAGCAG  2351
            ||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2344  AACACACTACAGATGCTGCATAACATGAAGGGACAGTTTGCTGAGCATCTTCTTGGAGCTGGATTTGTAAGCAG  2417

Query 2352  TAGAAATCCTAAAGATCCAGAATCTAATATAAATTCAGATAATGAGAAGATAATTAAAGCTGTCATCTGTGCTG  2425
            |||||.|||.|||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2418  TAGAAGTCCCAAAGATCCAAAAGCTAATATAAATTCAGATAATGAGAAGATAATTAAAGCTGTCATCTGTGCTG  2491

Query 2426  GTTTATATCCCAAAGTTGCTAAAATTCGACTAAATTTGGGTAAAAAAAGAAAAATGGTAAAAGTTTACACAAAA  2499
            |||||||||||||||||||||||||.||||||||||||||||||||.||.|||||||||||||||.||||.||.
Sbjct 2492  GTTTATATCCCAAAGTTGCTAAAATCCGACTAAATTTGGGTAAAAAGAGGAAAATGGTAAAAGTTCACACGAAG  2565

Query 2500  ACCGATGGCCTGGTTGCTGTTCATCCTAAATCTGTTAATGTGGAGCAAACAGACTTTCACTACAACTGGCTTAT  2573
            .|.||.|||||||||.||.||||||||||.|||||.||.||||||||.||||||||.|||||||||||||||||
Sbjct 2566  TCTGACGGCCTGGTTTCTATTCATCCTAAGTCTGTCAACGTGGAGCAGACAGACTTCCACTACAACTGGCTTAT  2639

Query 2574  CTATCACCTAAAGATGAGAACAAGCAGTATATACTTGTATGACTGCACAGAGGTTTCCCCATACTGTCTCTTGT  2647
            |||||||||.|||||||||||||||||||||||||||||.|||||.|||||.||.||.||||||||.|||.|||
Sbjct 2640  CTATCACCTGAAGATGAGAACAAGCAGTATATACTTGTACGACTGTACAGAAGTGTCACCATACTGCCTCCTGT  2713

Query 2648  TTTTTGGAGGTGACATTTCCATCCAGAAGGATAACGATCAGGAAACTATTGCTGTAGATGAGTGGATTGTATTT  2721
            |.||||||||.||.||||||||||||||.|||||.||||||||||.||||||||||||||||||||||||.|||
Sbjct 2714  TCTTTGGAGGAGATATTTCCATCCAGAAAGATAAGGATCAGGAAATTATTGCTGTAGATGAGTGGATTGTGTTT  2787

Query 2722  CAGTCTCCAGCAAGAATTGCCCATCTTGTTAAGGAATTAAGAAAGGAACTAGATATTCTTCTGCAAGAGAAGAT  2795
            ||||||||||.|||||||||||||||||||||||.|.|||||||||||||.||||..|||||.|||||||||||
Sbjct 2788  CAGTCTCCAGAAAGAATTGCCCATCTTGTTAAGGGACTAAGAAAGGAACTGGATAGCCTTCTACAAGAGAAGAT  2861

Query 2796  TGAAAGTCCTCATCCTGTAGACTGGAATGACACTAAATCCAGAGACTGTGCAGTACTGTCAGCTATTATAGACT  2869
            ||||||.||||||||||||||||||.|.||||||||.||.|||||||||||||||||||||||||||.||||||
Sbjct 2862  TGAAAGCCCTCATCCTGTAGACTGGGACGACACTAAGTCAAGAGACTGTGCAGTACTGTCAGCTATTCTAGACT  2935

Query 2870  TGATCAAAACACAGGAAAAGGCAACTCCCAGGAACTTTCCGCCACGATTCCAGGATGGATATTACAGC  2937
            ||||||||||.||.||||||||.|||||.||||||||.||.|||||.|..|||||.||||||||.|||
Sbjct 2936  TGATCAAAACTCAAGAAAAGGCTACTCCAAGGAACTTGCCACCACGGTCACAGGACGGATATTATAGC  3003

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