Nucleotide Global Alignment
Description
- Query:
- TRCN0000468890
- Subject:
- XM_011240240.2
- Aligned Length:
- 3028
- Identities:
- 1883
- Gaps:
- 947
Alignment
Query 1 ATGAGTTATGACTACCATCAGAACTGGGGCCGTGATGGGGGTCCCCGCAGCTCCGGTGGGGGCTATGGAGGGGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCCAGCAGGGGGTCATGGAGGTAACCGAGGCTCCGGAGGAGGCGGCGGCGGCGGAGGGGGTGGTCGAGGCGGCA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGGGCCGGCATCCCGGGCACCTGAAAGGCCGCGAAATCGGCATGTGGTACGCGAAAAAACAGGGGCAGAAGAAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAGGAAGCGGAGAGGCAAGAGAGAGCTGTAGTACACATGGATGAACGACGAGAAGAACAAATTGTACAGTTACT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAATTCTGTTCAAGCGAAGAATGATAAAGAGTCAGAAGCACAGATATCCTGGTTTGCTCCTGAGGATCATGGAT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACGGTACTGAAGTTTCTACTAAGAACACACCATGCTCAGAGAACAAACTTGACATCCAGGAAAAGAAGTTGATA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AATCAAGAAAAAAAAATGTTTAGAATCAGGAACAGATCATATATTGACCGAGATTCTGAGTATCTCTTGCAAGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AAATGAACCAGATGGAACTTTAGACCAAAAATTATTGGAAGATTTACAAAAGAAAAAAAATGACCTTCGGTATA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TTGAAATGCAGCATTTCAGAGAAAAGCTGCCTTCGTATGGAATGCAAAAGGAATTGGTAAATTTAATTGATAAC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CATCAGGTAACAGTAATAAGTGGTGAAACTGGTTGTGGCAAAACCACTCAAGTTACTCAGTTCATTTTGGATAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CTACATTGAAAGAGGAAAAGGATCTGCTTGCAGAATAGTTTGTACTCAGCCAAGAAGAATTAGTGCCATTTCAG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TTGCGGAAAGAGTAGCTGCAGAAAGGGCAGAATCTTGTGGCAGTGGTAATAGTACTGGATATCAAATTCGTCTC 888
.||||||||||||||||||.||.||||||||.
Sbjct 1 ------------------------------------------ATGGTAATAGTACTGGATACCAGATTCGTCTT 32
Query 889 CAGAGTCGGTTGCCAAGGAAACAGGGTTCTATCTTATACTGTACAACAGGAATCATCCTTCAGTGGCTCCAGTC 962
||.||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 33 CAAAGTCGGTTGCCAAGGAAACAAGGTTCTATCTTATACTGCACAACAGGAATCATTCTTCAGTGGCTCCAGTC 106
Query 963 AGACCCGT----ATTTGTCCAGTGTTAGTCATATCGTACTTGATGAAATCCATGAAAGAAATCTGCAGTCAGAT 1032
.|||.||| .|||||||||||||||||||||.||||||||||||||.||||||||.|||||.|||||.|||
Sbjct 107 CGACTCGTGAACGTTTGTCCAGTGTTAGTCATATTGTACTTGATGAAATTCATGAAAGGAATCTACAGTCGGAT 180
Query 1033 GTTTTAATGACTGTTGTTAAAGACCTTCTCAATTTTCGATCTGACTTGAAAGTAATATTGATGAGTGCAACATT 1106
|||||||||||||||.|||||||.||||||.|||||||||||||..|.|||||||||||||||||||||||.||
Sbjct 181 GTTTTAATGACTGTTATTAAAGATCTTCTCCATTTTCGATCTGATCTCAAAGTAATATTGATGAGTGCAACTTT 254
Query 1107 GAATGCAGAAAAGTTTTCAGAATATTTTGGTAACTGTCCAATGATACATATACCTGGTTTTACCTTTCCGGTTG 1180
||||||.||.||.|||||||||||||||||||||||||||||||||||||||||.||.|||||.|||||.||||
Sbjct 255 GAATGCTGAGAAATTTTCAGAATATTTTGGTAACTGTCCAATGATACATATACCCGGGTTTACTTTTCCAGTTG 328
Query 1181 TGGAATATCTTTTGGAAGATGTAATTGAAAAAATAAGGTATGTTCCAGAACAAAAAGAACACAGATGCCAGTTT 1254
||||||||||||||||||||.|.||||||||||||||.|||||||||||.|||||||||||.||||.||||||.
Sbjct 329 TGGAATATCTTTTGGAAGATATCATTGAAAAAATAAGATATGTTCCAGACCAAAAAGAACATAGATCCCAGTTC 402
Query 1255 AAGAGGGGTTTCATGCAAGGGCATGTAAATAGACAAGAAAAAGAAGAAAAAGAAGCAATATATAAAGAACGTTG 1328
|||||||||||||||||.||.||||||||||||||||||||||||||||||||.||.||.|||||.|||||.||
Sbjct 403 AAGAGGGGTTTCATGCAGGGTCATGTAAATAGACAAGAAAAAGAAGAAAAAGAGGCCATCTATAAGGAACGCTG 476
Query 1329 GCCAGATTATGTAAGGGAACTGCGAAGAAGGTATTCTGCAAGTACTGTAGATGTTATAGAAATGATGGAGGATG 1402
|||||..|||.|||.|||||||||.|.|||.||.|||||||||||.|||||||||.|..||||||||||.||||
Sbjct 477 GCCAGCGTATATAAAGGAACTGCGGACAAGATACTCTGCAAGTACCGTAGATGTTTTGCAAATGATGGATGATG 550
Query 1403 ATAAAGTTGATCTGAATTTGATTGTTGCCCTCATCCGATACATTGTTTTGGAAGAAGAGGATGGTGCGATACTG 1476
||||||||||||||||||||||||.||||||.||.||||||||||||||||||||||||||||||||.|||.||
Sbjct 551 ATAAAGTTGATCTGAATTTGATTGCTGCCCTTATTCGATACATTGTTTTGGAAGAAGAGGATGGTGCAATATTG 624
Query 1477 GTCTTTCTGCCAGGCTGGGACAATATCAGCACTTTACATGATCTCTTGATGTCACAAGTAATGTTTAAATCAGA 1550
||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||||||.||||||||||||||
Sbjct 625 GTCTTTCTACCAGGCTGGGACAATATCAGTACTTTGCATGATCTCTTGATGTCACAAGTGATGTTTAAATCAGA 698
Query 1551 TAAATTTTTAATTATACCTTTACATTCACTGATGCCTACAGTTAACCAGACACAGGTGTTTAAAAGAACCCCTC 1624
|||.|||.|.|||||||||||||||||||||||||||||.||.||||||||||||||.|||||||.|||.||||
Sbjct 699 TAAGTTTCTCATTATACCTTTACATTCACTGATGCCTACCGTCAACCAGACACAGGTATTTAAAAAAACTCCTC 772
Query 1625 CTGGTGTTCGGAAAATAGTAATTGCTACCAACATTGCGGAGACTAGCATTACCATAGATGATGTCGTTTATGTG 1698
|.|||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||.||||||||.
Sbjct 773 CCGGTGTTCGGAAAATAGTAATTGCTACCAACATTGCAGAGACTAGCATCACCATAGATGATGTGGTTTATGTA 846
Query 1699 ATAGATGGAGGAAAAATAAAAGAGACGCATTTTGATACTCAGAACAATAACAGTACAATGTCCGCTGAGTGGGT 1772
|||||||||||||||||.|||||.||.||.|||||.||.||||||||.|.||||||.|||||.|||||||||||
Sbjct 847 ATAGATGGAGGAAAAATTAAAGAAACACACTTTGACACACAGAACAACATCAGTACCATGTCTGCTGAGTGGGT 920
Query 1773 TAGTAAAGCTAATGCCAAACAGAGAAAAGGTCGAGCTGGAAGAGTTCAACCTGGTCATTGCTATCATCTGTATA 1846
||||||||||||||||||||||||.|||||..||||||||||||||||.|||||||||||.|||||||||||||
Sbjct 921 TAGTAAAGCTAATGCCAAACAGAGGAAAGGGAGAGCTGGAAGAGTTCAGCCTGGTCATTGTTATCATCTGTATA 994
Query 1847 ATGGTCTTAGAGCAAGTCTTCTAGATGACTATCAACTGCCAGAAATTTTGAGAACTCCTTTGGAAGAACTTTGT 1920
|||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.|||
Sbjct 995 ATGGTCTTAGAGCAAGTCTTCTAGATGACTACCAACTACCAGAAATTTTGAGAACTCCTTTGGAAGAACTCTGT 1068
Query 1921 TTACAAATAAAGATTTTAAGGCTAGGTGGAATTGCTTATTTTCTGAGTAGATTAATGGACCCACCATCAAATGA 1994
||.|||||||||||.||.|||||.|||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1069 TTGCAAATAAAGATCTTGAGGCTGGGTGGAATTGCTTATTTTCTGAGTAGATTAATGGATCCACCATCAAATGA 1142
Query 1995 GGCAGTGTTACTCTCCATAAGACACCTGATGGAGCTGAACGCTTTGGATAAACAAGAAGAATTGACACCTCTTG 2068
|||||||.|.||||||||||.||||||.|||||.||||..|||||||||||.|||||||||||.||||||||||
Sbjct 1143 GGCAGTGGTGCTCTCCATAAAACACCTAATGGAACTGAGTGCTTTGGATAAGCAAGAAGAATTAACACCTCTTG 1216
Query 2069 GAGTCCACTTGGCACGATTACCCGTTGAGCCACATATTGGAAAAATGATTCTTTTTGGAGCACTGTTCTGCTGC 2142
|.|||||.||.||.|||.|.||.|||||||||||||||||||||||||||||.||||||||..|||||||||||
Sbjct 1217 GTGTCCATTTAGCCCGACTGCCTGTTGAGCCACATATTGGAAAAATGATTCTCTTTGGAGCTTTGTTCTGCTGC 1290
Query 2143 TTAGACCCAGTACTCACTATTGCTGCTAGTCTCAGTTTCAAAGATCCATTTGTCATTCCACT------------ 2204
|||||.|||||.|||||.||||||||.||||||||.||.||||||||.||||||||||||.|
Sbjct 1291 TTAGATCCAGTTCTCACCATTGCTGCCAGTCTCAGCTTTAAAGATCCCTTTGTCATTCCATTGGGAAAAGAAAA 1364
Query 2205 -------------------------------------------------------------------------- 2204
Sbjct 1365 GATTGCAGATGCAAGAAGAAAAGAACTGGCAAAGGAAACTAGAAGTGATCACCTGACAGTTGTGAATGCATTTG 1438
Query 2205 -GGGCTGGGAAGAGGCTAGGCGACGTGGTTTCAGATACGAAAAGGACTATTGCTGGGAATATTTTCTGTCTTCA 2277
||||||||||||.||.|..||||||||||||||.||.|||||||||||.|||||||||||||||||||||||.
Sbjct 1439 AGGGCTGGGAAGAAGCCAAACGACGTGGTTTCAGGTATGAAAAGGACTACTGCTGGGAATATTTTCTGTCTTCG 1512
Query 2278 AACACACTGCAGATGCTGCATAACATGAAAGGACAGTTTGCTGAGCATCTTCTTGGAGCTGGATTTGTAAGCAG 2351
||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1513 AACACACTACAGATGCTGCATAACATGAAGGGACAGTTTGCTGAGCATCTTCTTGGAGCTGGATTTGTAAGCAG 1586
Query 2352 TAGAAATCCTAAAGATCCAGAATCTAATATAAATTCAGATAATGAGAAGATAATTAAAGCTGTCATCTGTGCTG 2425
|||||.|||.|||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1587 TAGAAGTCCCAAAGATCCAAAAGCTAATATAAATTCAGATAATGAGAAGATAATTAAAGCTGTCATCTGTGCTG 1660
Query 2426 GTTTATATCCCAAAGTTGCTAAAATTCGACTAAATTTGGGTAAAAAAAGAAAAATGGTAAAAGTTTACACAAAA 2499
|||||||||||||||||||||||||.||||||||||||||||||||.||.|||||||||||||||.||||.||.
Sbjct 1661 GTTTATATCCCAAAGTTGCTAAAATCCGACTAAATTTGGGTAAAAAGAGGAAAATGGTAAAAGTTCACACGAAG 1734
Query 2500 ACCGATGGCCTGGTTGCTGTTCATCCTAAATCTGTTAATGTGGAGCAAACAGACTTTCACTACAACTGGCTTAT 2573
.|.||.|||||||||.||.||||||||||.|||||.||.||||||||.||||||||.|||||||||||||||||
Sbjct 1735 TCTGACGGCCTGGTTTCTATTCATCCTAAGTCTGTCAACGTGGAGCAGACAGACTTCCACTACAACTGGCTTAT 1808
Query 2574 CTATCACCTAAAGATGAGAACAAGCAGTATATACTTGTATGACTGCACAGAGGTTTCCCCATACTGTCTCTTGT 2647
|||||||||.|||||||||||||||||||||||||||||.|||||.|||||.||.||.||||||||.|||.|||
Sbjct 1809 CTATCACCTGAAGATGAGAACAAGCAGTATATACTTGTACGACTGTACAGAAGTGTCACCATACTGCCTCCTGT 1882
Query 2648 TTTTTGGAGGTGACATTTCCATCCAGAAGGATAACGATCAGGAAACTATTGCTGTAGATGAGTGGATTGTATTT 2721
|.||||||||.||.||||||||||||||.|||||.||||||||||.||||||||||||||||||||||||.|||
Sbjct 1883 TCTTTGGAGGAGATATTTCCATCCAGAAAGATAAGGATCAGGAAATTATTGCTGTAGATGAGTGGATTGTGTTT 1956
Query 2722 CAGTCTCCAGCAAGAATTGCCCATCTTGTTAAGGAATTAAGAAAGGAACTAGATATTCTTCTGCAAGAGAAGAT 2795
||||||||||.|||||||||||||||||||||||.|.|||||||||||||.||||..|||||.|||||||||||
Sbjct 1957 CAGTCTCCAGAAAGAATTGCCCATCTTGTTAAGGGACTAAGAAAGGAACTGGATAGCCTTCTACAAGAGAAGAT 2030
Query 2796 TGAAAGTCCTCATCCTGTAGACTGGAATGACACTAAATCCAGAGACTGTGCAGTACTGTCAGCTATTATAGACT 2869
||||||.||||||||||||||||||.|.||||||||.||.|||||||||||||||||||||||||||.||||||
Sbjct 2031 TGAAAGCCCTCATCCTGTAGACTGGGACGACACTAAGTCAAGAGACTGTGCAGTACTGTCAGCTATTCTAGACT 2104
Query 2870 TGATCAAAACACAGGAAAAGGCAACTCCCAGGAACTTTCCGCCACGATTCCAGGATGGATATTACAGC 2937
||||||||||.||.||||||||.|||||.||||||||.||.|||||.|..|||||.||||||||.|||
Sbjct 2105 TGATCAAAACTCAAGAAAAGGCTACTCCAAGGAACTTGCCACCACGGTCACAGGACGGATATTATAGC 2172
