Nucleotide Global Alignment
Description
- Query:
- TRCN0000468890
- Subject:
- XM_011240242.2
- Aligned Length:
- 2941
- Identities:
- 1576
- Gaps:
- 1151
Alignment
Query 1 ATGAGTTATGACTACCATCAGAACTGGGGCCGTGATGGGGGTCCCCGCAGCTCCGGTGGGGGCTATGGAGGGGG 74
|||||.||.|||||.|||||||.||||.||||.||||||||.||.||..|||||||...|||||
Sbjct 1 ATGAGCTACGACTATCATCAGAGCTGGAGCCGCGATGGGGGCCCACGGGGCTCCGGCCAGGGCT---------- 64
Query 75 GCCAGCAG----GGGGTCATGGAGGTAACCGAGGCTCCGGAGGAGGCGGCGGCGGCGGAGGGGGTGGTCGAGGC 144
|||||.| ||.|.| |||||.|.|||.||||| .||||||||||||||| ||.||.|||
Sbjct 65 -CCAGCGGCGGCGGCGGC--GGAGGGAGCCGGGGCTC---------GGGCGGCGGCGGAGGG---GGCCGCGGC 123
Query 145 GGCAGGGGCCGGCATCCCGGGCACCTGAAAGGCCGCGAAATCGGCATGTGGTACGCGAAAAAACAGGGGCAGAA 218
|||.|||||||||||||||..|||||.||.||.|||||.||||||.||||||||||.||.||.|||..||||||
Sbjct 124 GGCCGGGGCCGGCATCCCGCACACCTTAAGGGTCGCGAGATCGGCCTGTGGTACGCCAAGAAGCAGACGCAGAA 197
Query 219 GAACAAGGAAGCGGAGAGGCAAGAGAGAGCTGTAGTACACATGGATGAACGACGAGAAGAACAAATTGTACAGT 292
|||||||||.||.||||||||.||||||||||||||.||||||||||||||.||||||||.||||||||.|||.
Sbjct 198 GAACAAGGAGGCTGAGAGGCAGGAGAGAGCTGTAGTGCACATGGATGAACGTCGAGAAGAGCAAATTGTGCAGC 271
Query 293 TACTGAATTCTGTTCAAGCGAAGAATGATAAAGAGTCAGAAGCACAGATATCCTGGTTTGCTCCTGAGGATCAT 366
|.||||||||.||.|||||.||||.|||.|||||.||||||||.||||||||||||||||||||||||||||||
Sbjct 272 TGCTGAATTCAGTCCAAGCTAAGACTGACAAAGATTCAGAAGCGCAGATATCCTGGTTTGCTCCTGAGGATCAT 345
Query 367 GGATACGGTACTGAAGTTTCTACTAAGAACACACCATGCTCAGAGAACAAACTTGACATCCAGGAAAAGAAGTT 440
||.||.|||||||||||||||.|..||||.|.|..|..|||||||||.||||||||||.||||||||||||.||
Sbjct 346 GGGTATGGTACTGAAGTTTCTTCAGAGAAAAAAATAAACTCAGAGAAGAAACTTGACAACCAGGAAAAGAAATT 419
Query 441 GATAAATCAAGAAAAAAAAATGTTTAGAATCAGGAACAGATCATATATTGACCGAGATTCTGAGTATCTCTTGC 514
|.||||.|||||||||||.|..|||||.||||...|||.||||||||||||||||||||||||||||.|.||||
Sbjct 420 GCTAAACCAAGAAAAAAAGACATTTAGGATCACAGACAAATCATATATTGACCGAGATTCTGAGTATTTATTGC 493
Query 515 AAGAAAATGAACCAGATGGAACTTTAGACCAAAAATTATTGGAAGATTTACAAAAGAAAAAAAATGACCTTCGG 588
||||||||||.|||.|...||..|||||.|||.|.|||.|||||||||||||||.||||||||.|||||.|||.
Sbjct 494 AAGAAAATGAGCCAAACCTAAGCTTAGATCAACATTTACTGGAAGATTTACAAAGGAAAAAAACTGACCCTCGA 567
Query 589 TATATTGAAATGCAGCATTTCAGAGAAAAGCTGCCTTCGTATGGAATGCAAAAGGAATTGGTAAATTTAATTGA 662
|||||.||.|||||||.|||||||.|||||||||||||.|||||||||||.|||||..||||||||.||||..|
Sbjct 568 TATATAGAGATGCAGCGTTTCAGAAAAAAGCTGCCTTCATATGGAATGCAGAAGGAGCTGGTAAATCTAATCAA 641
Query 663 TAACCATCAGGTAACAGTAATAAGTGGTGAAACTGGTTGTGGCAAAACCACTCAAGTTACTCAGTTCATTTTGG 736
||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||.||||||||.||||
Sbjct 642 TAACCATCAGGTGACAGTAATAAGTGGTGAAACTGGTTGTGGCAAAACCACTCAGGTTACGCAGTTCATCTTGG 715
Query 737 ATAACTACATTGAAAGAGGAAAAGGATCTGCTTGCAGAATAGTTTGTACTCAGCCAAGAAGAATTAGTGCCATT 810
||||||||||.||||||||||||||.|||||.|||||||||||.|||||||||||.||||||||||||||||||
Sbjct 716 ATAACTACATCGAAAGAGGAAAAGGGTCTGCCTGCAGAATAGTGTGTACTCAGCCGAGAAGAATTAGTGCCATT 789
Query 811 TCAGTTGCGGAAAGAGTAGCTGCAGAAAGGGCAGAATCTTGTGGCAGTGGTAATAGTACTGGATATCAAATTCG 884
|||||.||.||.|||||.||..|||||||||||||.||||||||||.||||||||||||||||||.||.|||||
Sbjct 790 TCAGTCGCTGAGAGAGTGGCCACAGAAAGGGCAGAGTCTTGTGGCAATGGTAATAGTACTGGATACCAGATTCG 863
Query 885 TCTCCAGAGTCGGTTGCCAAGGAAACAGGGTTCTATCTTATACTGTACAACAGGAATCATCCTTCAGTGGCTCC 958
|||.||.||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||||||||||
Sbjct 864 TCTTCAAAGTCGGTTGCCAAGGAAACAAGGTTCTATCTTATACTGCACAACAGGAATCATTCTTCAGTGGCTCC 937
Query 959 AGTCAGACCCGTATTTGTCCAGTGTTAGTCATATCGTACTTGATGAAATCCATGAAAGAAATCTGCAGTCAGAT 1032
||||.|||.|...|||||||||||||||||||||.||||||||||||||.||||||||.|||||.|||||.|||
Sbjct 938 AGTCCGACTCACGTTTGTCCAGTGTTAGTCATATTGTACTTGATGAAATTCATGAAAGGAATCTACAGTCGGAT 1011
Query 1033 GTTTTAATGACTGTTGTTAAAGACCTTCTCAATTTTCGATCTGACTTGAAAGTAATATTGATGAGTGCAACATT 1106
|||||||||||||||.|||||||.||||||.|||||||||||||..|.|||||||||||||||||||||||.||
Sbjct 1012 GTTTTAATGACTGTTATTAAAGATCTTCTCCATTTTCGATCTGATCTCAAAGTAATATTGATGAGTGCAACTTT 1085
Query 1107 GAATGCAGAAAAGTTTTCAGAATATTTTGGTAACTGTCCAATGATACATATACCTGGTTTTACCTTTCCGGTTG 1180
||||||.||.||.|||||||||||||||||||||||||||||||||||||||||.||.|||||.|||||.||||
Sbjct 1086 GAATGCTGAGAAATTTTCAGAATATTTTGGTAACTGTCCAATGATACATATACCCGGGTTTACTTTTCCAGTTG 1159
Query 1181 TGGAATATCTTTTGGAAGATGTAATTGAAAAAATAAGGTATGTTCCAGAACAAAAAGAACACAGATGCCAGTTT 1254
||||||||||||||||||||.|.||||||||||||||.|||||||||||.|||||||||||.||||.||||||.
Sbjct 1160 TGGAATATCTTTTGGAAGATATCATTGAAAAAATAAGATATGTTCCAGACCAAAAAGAACATAGATCCCAGTTC 1233
Query 1255 AAGAGGGGTTTCATGCAAGGGCATGTAAATAGACAAGAAAAAGAAGAAAAAGAAGCAATATATAAAGAACGTTG 1328
|||||||||||||||||.||.||||||||||||||||||||||||||||||||.||.||.|||||.|||||.||
Sbjct 1234 AAGAGGGGTTTCATGCAGGGTCATGTAAATAGACAAGAAAAAGAAGAAAAAGAGGCCATCTATAAGGAACGCTG 1307
Query 1329 GCCAGATTATGTAAGGGAACTGCGAAGAAGGTATTCTGCAAGTACTGTAGATGTTATAGAAATGATGGAGGATG 1402
|||||..|||.|||.|||||||||.|.|||.||.|||||||||||.|||||||||.|..||||||||||.||||
Sbjct 1308 GCCAGCGTATATAAAGGAACTGCGGACAAGATACTCTGCAAGTACCGTAGATGTTTTGCAAATGATGGATGATG 1381
Query 1403 ATAAAGTTGATCTGAATTTGATTGTTGCCCTCATCCGATACATTGTTTTGGAAGAAGAGGATGGTGCGATACTG 1476
||||||||||||||||||||||||.||||||.||.||||||||||||||||||||||||||||||||.|||.||
Sbjct 1382 ATAAAGTTGATCTGAATTTGATTGCTGCCCTTATTCGATACATTGTTTTGGAAGAAGAGGATGGTGCAATATTG 1455
Query 1477 GTCTTTCTGCCAGGCTGGGACAATATCAGCACTTTACATGATCTCTTGATGTCACAAGTAATGTTTAAATCAGA 1550
||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||||||.||||||||||||||
Sbjct 1456 GTCTTTCTACCAGGCTGGGACAATATCAGTACTTTGCATGATCTCTTGATGTCACAAGTGATGTTTAAATCAGA 1529
Query 1551 TAAATTTTTAATTATACCTTTACATTCACTGATGCCTACAGTTAACCAGACACAGGTGTTTAAAAGAACCCCTC 1624
|||.|||.|.|||||||||||||||||||||||||||||.||.||||||||||||||.|||||||.|||.||||
Sbjct 1530 TAAGTTTCTCATTATACCTTTACATTCACTGATGCCTACCGTCAACCAGACACAGGTATTTAAAAAAACTCCTC 1603
Query 1625 CTGGTGTTCGGAAAATAGTAATTGCTACCAACATTGCGGAGACTAGCATTACCATAGATGATGTCGTTTATGTG 1698
|.|||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||.||||||||.
Sbjct 1604 CCGGTGTTCGGAAAATAGTAATTGCTACCAACATTGCAGAGACTAGCATCACCATAGATGATGTGGTTTATGTA 1677
Query 1699 ATAGATGGAGGAAAAATAAAAGAGACGCATTTTGATACTCAGAACAATAACAGTACAATGTCCGCTGAGTGGGT 1772
|||||||||||||||||.|||||.||.||.|||||.||.||||||||.|.||||||.|||||.|||||||||||
Sbjct 1678 ATAGATGGAGGAAAAATTAAAGAAACACACTTTGACACACAGAACAACATCAGTACCATGTCTGCTGAGTGGGT 1751
Query 1773 TAGTAAAGCTAATGCCAAACAGAGAAAAGGTCGAGCTGGAAGAGTTCAACCTGGTCATTGCTATCATCTGTATA 1846
||||||||||||||||||||||||.|||||..||||||||||.
Sbjct 1752 TAGTAAAGCTAATGCCAAACAGAGGAAAGGGAGAGCTGGAAGG------------------------------- 1794
Query 1847 ATGGTCTTAGAGCAAGTCTTCTAGATGACTATCAACTGCCAGAAATTTTGAGAACTCCTTTGGAAGAACTTTGT 1920
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 1921 TTACAAATAAAGATTTTAAGGCTAGGTGGAATTGCTTATTTTCTGAGTAGATTAATGGACCCACCATCAAATGA 1994
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 1995 GGCAGTGTTACTCTCCATAAGACACCTGATGGAGCTGAACGCTTTGGATAAACAAGAAGAATTGACACCTCTTG 2068
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2069 GAGTCCACTTGGCACGATTACCCGTTGAGCCACATATTGGAAAAATGATTCTTTTTGGAGCACTGTTCTGCTGC 2142
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2143 TTAGACCCAGTACTCACTATTGCTGCTAGTCTCAGTTTCAAAGATCCATTTGTCATTCCACTGGGCTGGGAAGA 2216
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2217 GGCTAGGCGACGTGGTTTCAGATACGAAAAGGACTATTGCTGGGAATATTTTCTGTCTTCAAACACACTGCAGA 2290
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2291 TGCTGCATAACATGAAAGGACAGTTTGCTGAGCATCTTCTTGGAGCTGGATTTGTAAGCAGTAGAAATCCTAAA 2364
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2365 GATCCAGAATCTAATATAAATTCAGATAATGAGAAGATAATTAAAGCTGTCATCTGTGCTGGTTTATATCCCAA 2438
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2439 AGTTGCTAAAATTCGACTAAATTTGGGTAAAAAAAGAAAAATGGTAAAAGTTTACACAAAAACCGATGGCCTGG 2512
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2513 TTGCTGTTCATCCTAAATCTGTTAATGTGGAGCAAACAGACTTTCACTACAACTGGCTTATCTATCACCTAAAG 2586
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2587 ATGAGAACAAGCAGTATATACTTGTATGACTGCACAGAGGTTTCCCCATACTGTCTCTTGTTTTTTGGAGGTGA 2660
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2661 CATTTCCATCCAGAAGGATAACGATCAGGAAACTATTGCTGTAGATGAGTGGATTGTATTTCAGTCTCCAGCAA 2734
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2735 GAATTGCCCATCTTGTTAAGGAATTAAGAAAGGAACTAGATATTCTTCTGCAAGAGAAGATTGAAAGTCCTCAT 2808
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2809 CCTGTAGACTGGAATGACACTAAATCCAGAGACTGTGCAGTACTGTCAGCTATTATAGACTTGATCAAAACACA 2882
Sbjct 1795 -------------------------------------------------------------------------- 1794
Query 2883 GGAAAAGGCAACTCCCAGGAACTTTCCGCCACGATTCCAGGATGGATATTACAGC 2937
Sbjct 1795 ------------------------------------------------------- 1794
