Nucleotide Global Alignment
Description
- Query:
- TRCN0000468951
- Subject:
- NR_146911.1
- Aligned Length:
- 2470
- Identities:
- 1646
- Gaps:
- 769
Alignment
Query 1 -----ATGC---CCAGCAGGACCGGCC---CCAAGATGG------------------------AAGGGAGCGGC 39
|.|| ||.|||||||| || |..||.||| ||| |.|
Sbjct 1 CTGGCAGGCCAACCTGCAGGACC--CCGGGCTTAGCTGGGTTCTGTTCTGATGTCGCATTTTCAAG-----GTC 67
Query 40 GGCCGCGTCCG---CCTCAAGGCGCATTACGGGGGGGACATCTTCATCACCAGCGTGGACGCCGCCACGACCTT 110
.||.|.||||| ||| ||.| |||.| |||..||.||| ||.||
Sbjct 68 CGCTGAGTCCGAGCCCT------GCCT-------GGGTC----------------TGGCTGCTGCC-CGCCC-- 109
Query 111 CGAGGAGCTCTGTGAGGA-AGTG-------AGAGA----------CATGTGTCGTCTGCACCAG-CAGCACCCG 165
|||||.| ||| .||| ||||| |.||||.||||.|| | ||||.||.|
Sbjct 110 ------GCTCTCT--GGACTGTGCTGATGCAGAGATGCTTGTTTTCCTGTGACGTCAGC----GTCAGCTCCTG 171
Query 166 CTCACCC---------TCAAGTGGGTG-GACAGCGAAGGTGACCCTTGC-ACGGTGTCCTCCCAGATGGAGCTG 228
|.||.|| |..|||..||| ..|||| || ||.|| ||.| ||.||.|..|||||.|
Sbjct 172 CACATCCATGCCGTGTTTTAGTTTGTGCCTCAGC-----TG---CTGGCTACAG----CTTCCCGGGGGAGCCG 233
Query 229 GAAGAGGCTTTCCGCCTGGCCC----GTCAGT------GCAGGGAT----------------------GAAGGC 270
| .|.||.||.||.|| |.|| | |||||||| |..|||
Sbjct 234 G-------GTACCACCCGGGCCTGGAGACA-TGAGGAGGCAGGGATGTGAGGGGCGGGGGACAGGACAGCCGGC 299
Query 271 CTCATC------ATTCATGTTTTCC-------CGAGCACCCCTG------------------------------ 301
|| || || ||.|..||| |||||..|||||
Sbjct 300 CT--TCCGTTAAAT--ATCTGCTCCTCGCGCTCGAGCCTCCCTGCCTATTGTCGGGGCCGGAGGCGAGCCGACG 369
Query 302 -AGCA-------------------------GCCT-------GGCCTGCC------------------ATGTCCG 324
|||| |||| .|||.||| ||.|.||
Sbjct 370 CAGCATCAGCTCGTCAACGGGAAGGAAGATGCCTCCCTGCACGCCCGCCGCGCACAGAGCATAAAGAATCTGCG 443
Query 325 -----------GGAGAAGA----CAAATCTATCTACCGCCGGGGAGCCAGAAGATGGAGGAAGCTGTACCGTGC 383
|||||||| |.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 CTGAGGAGGCAGGAGAAGAAAGCCGAATCTATCTACCGCCGGGGAGCCAGAAGATGGAGGAAGCTGTACCGTGC 517
Query 384 CAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGG 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518 CAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGG 591
Query 458 GCCTCGCGAGGCAAGGCTACAGGTGCATCAACTGCAAACTGCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCG 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 GCCTCGCGAGGCAAGGCTACAGGTGCATCAACTGCAAACTGCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCG 665
Query 532 CTGACCTGCAGGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGC 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 CTGACCTGCAGGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGC 739
Query 606 CGACCTTCCTTCCGAGGAGACAGATGGAATTGCTTACATTTCCTCATCCCGGAAGCATGACAGCATTAAAGACG 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 740 CGACCTTCCTTCCGAGGAGACAGATGGAATTGCTTACATTTCCTCATCCCGGAAGCATGACAGCATTAAAGACG 813
Query 680 ACTCGGAGGACCTTAAGCCAGTTATCGATGGGATGGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCAGGAC 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 ACTCGGAGGACCTTAAGCCAGTTATCGATGGGATGGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCAGGAC 887
Query 754 TTTGACCTAATCAGAGTCATCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGAAGAAGAATGACCA 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 TTTGACCTAATCAGAGTCATCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGAAGAAGAATGACCA 961
Query 828 AATTTACGCCATGAAAGTGGTGAAGAAAGAGCTGGTGCATGATGACGAGGATATTGACTGGGTACAGACAGAGA 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 AATTTACGCCATGAAAGTGGTGAAGAAAGAGCTGGTGCATGATGACGAGGATATTGACTGGGTACAGACAGAGA 1035
Query 902 AGCACGTGTTTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGGATTACACTCCTGCTTCCAGACGACAAGTCGG 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 AGCACGTGTTTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGGATTACACTCCTGCTTCCAGACGACAAGTCGG 1109
Query 976 TTGTTCCTGGTCATTGAGTACGTCAACGGCGGGGACCTGATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGA 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 TTGTTCCTGGTCATTGAGTACGTCAACGGCGGGGACCTGATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGA 1183
Query 1050 GGAGCACGCCAGGTTCTACGCGGCCGAGATCTGCATCGCCCTCAACTTCCTGCACGAGAGGGGGATCATCTACA 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 GGAGCACGCCAGGTTCTACGCGGCCGAGATCTGCATCGCCCTCAACTTCCTGCACGAGAGGGGGATCATCTACA 1257
Query 1124 GGGACCTGAAGCTGGACAACGTCCTCCTGGATGCGGACGGGCACATCAAGCTCACAGACTACGGCATGTGCAAG 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 GGGACCTGAAGCTGGACAACGTCCTCCTGGATGCGGACGGGCACATCAAGCTCACAGACTACGGCATGTGCAAG 1331
Query 1198 GAAGGCCTGGGCCCTGGTGACACAACGAGCACTTTCTGCGGAACCCCGAATTACATCGCCCCCGAAATCCTGCG 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 GAAGGCCTGGGCCCTGGTGACACAACGAGCACTTTCTGCGGAACCCCGAATTACATCGCCCCCGAAATCCTGCG 1405
Query 1272 GGGAGAGGAGTACGGGTTCAGCGTGGACTGGTGGGCGCTGGGAGTCCTCATGTTTGAGATGATGGCCGGGCGCT 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 GGGAGAGGAGTACGGGTTCAGCGTGGACTGGTGGGCGCTGGGAGTCCTCATGTTTGAGATGATGGCCGGGCGCT 1479
Query 1346 CCCCGTTCGACATCATCACCGACAACCCGGACATGAACACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAG 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 CCCCGTTCGACATCATCACCGACAACCCGGACATGAACACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAG 1553
Query 1420 CCCATCCGGATCCCCCGGTTCCTGTCCGTCAAAGCCTCCCATGTTTTAAAAGGATTTTTAAATAAGGACCCCAA 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 CCCATCCGGATCCCCCGGTTCCTGTCCGTCAAAGCCTCCCATGTTTTAAAAGGATTTTTAAATAAGGACCCCAA 1627
Query 1494 AGAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACT 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 AGAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACT 1701
Query 1568 GGGACTT------------------------------------------------------------------- 1574
|||||||
Sbjct 1702 GGGACTTGGTGTTTCATACAAAGAATACAAGTAACTGATGAATGAAGGGGGCATCTTGTGTCCCCACAATCCTG 1775
Query 1575 ----------------GCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGT 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1776 CTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGT 1849
Query 1633 CTGGACAACTTTGACACACAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAG 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1850 CTGGACAACTTTGACACACAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAG 1923
Query 1707 GATCGACCAGTCAGAGTTCGAAGGCTTTGAGTATATCAACCCATTATTGCTGTCCACCGAGGAGTCGGTG---- 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1924 GATCGACCAGTCAGAGTTCGAAGGCTTTGAGTATATCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAG 1997
Query 1777 -------------------------------------------------------------------------- 1776
Sbjct 1998 GCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGACCCTTTAACTGTATCCTTAACCACCGCATATGCATGCC 2071
Query 1777 -------------------------------------------------------------------------- 1776
Sbjct 2072 AGGCTGGGCACGGCTCCGAGGGCGGCCAGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGC 2145
Query 1777 -------------------------------------------------------------------------- 1776
Sbjct 2146 GCTGCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTG 2219
Query 1777 -------------------------------------------------------------------------- 1776
Sbjct 2220 TGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCC 2293
Query 1777 -------------------------------------------------------------------------- 1776
Sbjct 2294 ACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGT 2367
Query 1777 ---------------------------- 1776
Sbjct 2368 TCCGATGATGTGGAAGCTCAAAAAAAAA 2395
