Nucleotide Global Alignment

Description

Query:
TRCN0000468999
Subject:
NR_153502.1
Aligned Length:
2843
Identities:
1260
Gaps:
1498

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTGCGCGAACGAGAAAGGAGGAGGGCGCTACAGGCGACAGCGCTGCAGACGCCATTATCCTCTGCTTCTCCGC  74

Query    1  -------------------------------------------------------------------------A  1
                                                                                     |
Sbjct   75  TGCACGGACGTCGCCGTCGTGCTCGTCTCCCACTCGATTGCGGCCTATTGGTGGATCCATTTAATTCAAGAAAA  148

Query    2  TGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAA  75
            ||||.||.|||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGAGACCGAACAGCCAGAAGAAACCTTCCCCAACACCGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAA  222

Query   76  GATATGGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCA  149
            ||||||||||||||.|||||.|||||||||||||||||.||||||||||||||||||||.||||||.|||||||
Sbjct  223  GATATGGAAGAGGAGCAAGCCTTTAAAAGATCTAGAAATACTGATGAGATGGTTGAATTGCGCATTTTGCTTCA  296

Query  150  GAGCAAGAATGCTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCA  223
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct  297  GAGCAAGAATGCTGGAGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGAC----------  360

Query  224  GTGTTTCAGTCCCAGACAGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAA  297
                                              ||||.||||||||||||||||||||||.||.|||||||||
Sbjct  361  ----------------------------------CATACTGAGTATCAGTGCTGATATTGAGACGATTGGAGAA  400

Query  298  ATTCTGAAGAAAATCATCCCTACCTTGGAAGAGGGCCTGCAGTTGCCATCACCCGCTGCAACCAGCCAGCTCCC  371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct  401  ATTCTGAAGAAAATCATCCCTACCTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCC  474

Query  372  GCTCGAATCTGATGCTGTGGAATGCTTAAATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGC  445
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.|
Sbjct  475  GCTCGAATCTGATGCTGTGGAATGCTTAAATTACCAACATTATAAAGGAAGTGACTTTGATTGCGAGTTGAGAC  548

Query  446  TGTTGATTCATCAGAGTCTAGCAGGAGGAATTATTGGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAAC  519
            |||||||||||||||||||.|||||||||||.|||||.||.|||||||||||||||||||||||||||||.|||
Sbjct  549  TGTTGATTCATCAGAGTCTGGCAGGAGGAATAATTGGTGTTAAAGGTGCTAAAATCAAAGAACTTCGAGAAAAC  622

Query  520  ACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCATTCCACTGACAGAGTTGTTCTTATTGGAGGAAA  593
            |||||.||.||.|||||||||||||||||.|||||.|||||.||.|||||||||||||||||||||||||||||
Sbjct  623  ACTCAGACAACAATCAAGCTTTTCCAGGAGTGCTGCCCTCACTCTACTGACAGAGTTGTTCTTATTGGAGGAAA  696

Query  594  ACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATATCTGAGTCTCCCATCAAAGGACGTGCAC  667
            |||.||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  697  ACCTGATAGGGTTGTAGAATGCATCAAGATCATCCTTGACCTTATATCTGAGTCTCCCATCAAAGGACGTGCAC  770

Query  668  AGCCTTATGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACAATGATGTTTGATGACCGTCGC  741
            |.||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||||||||||||||.||.
Sbjct  771  AACCTTATGATCCCAACTTTTATGATGAGACCTATGATTATGGTGGTTTTACAATGATGTTTGATGACCGCCGA  844

Query  742  GGACGCCCAGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGTGGGCGTCC  815
            |||||.||.||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  845  GGACGACCTGTGGGATTCCCCATGAGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGTGGGCGTCC  918

Query  816  CATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTCCCGGACGAG  889
            |||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||.||.||.||.||.||||
Sbjct  919  CATGCCTCCTTCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCTCCACCACCACCACCTGGTCGAG  992

Query  890  GCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTCATG  963
            |.|||||||||||.||||||||.||||||||.|||||||||||.|||||||||||.|||||||||||.||.|||
Sbjct  993  GTGGCCGGGGTGGCAGCAGAGCCCGGAATCTGCCTCTTCCTCCTCCACCACCACCCAGAGGGGGAGATCTAATG  1066

Query  964  GCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGACGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGA  1037
            ||.||||||||||||||.||.|||||||||||.||.||.|||||||||||.|||||||||||||||||||||||
Sbjct 1067  GCTTATGACAGAAGAGGAAGGCCTGGAGACCGCTATGATGGCATGGTTGGGTTCAGTGCTGATGAAACTTGGGA  1140

Query 1038  CTCTGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCCGGATATGATT  1111
            .||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||||||.||.||||||||.|
Sbjct 1141  TTCTGCAATTGACACATGGAGCCCATCAGAATGGCAAATGGCTTATGAACCACAGGGTGGTTCTGGATATGACT  1214

Query 1112  ATTCCTATGCAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCC  1185
            ||||.|||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||
Sbjct 1215  ATTCTTATGCAGGGGGCCGTGGCTCATATGGTGATCTTGGCGGACCTATTATCACTACACAAGTAACTATTCCC  1288

Query 1186  AAAGATTTGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTC  1259
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.|||||.||
Sbjct 1289  AAAGATTTGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATTCGTCATGAATCTGGAGCATC  1362

Query 1260  GATCAAAATTGATGAGCCTTTAGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATAC  1333
            .||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1363  AATCAAAATTGATGAACCTTTAGAAGGATCTGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATAC  1436

Query 1334  AGAATGCACAGTATTTGCTGCAGAAC------------------------------------------------  1359
            ||||.|||||||||||||||||||||                                                
Sbjct 1437  AGAACGCACAGTATTTGCTGCAGAACAGTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAATGCAAGATATTT  1510

Query 1360  ------------AGTGTGAAGCAGTATTCTGGAAAGTTTTTC--------------------------------  1389
                        ||||||||||||||||||||||||||||||                                
Sbjct 1511  TTTCTTTTTTATAGTGTGAAGCAGTATTCTGGAAAGTTTTTCTAAGACTAGTGAAGAACTGAAGGAGTCCTGCA  1584

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1585  TCTTTTTTTTTTTATCTGCTTCTGTTTAAAAAGCCAACATTCCTCTGCTTCATAGGTGTTCTGCATTTGAGGTG  1658

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1659  TAGTGAAATCTTTGCTGTTCACCAGATGTAATGTTTTAGTTCCTTACAAACAGGGTTGGGGGGAGGGCATGCAA  1732

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1733  AAACTAACATTGAAATTTTGAAACAGCAGCAGAGTGAGTGACTTTTATTTTTTGTTCATTGTTGGTGGTTTTAA  1806

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1807  AAAAAATTCCCCCCATGTAATTATTGTGAACACCTTACTTTGTGGTCACTGTAACATTGGGGGGTGGGACAGGG  1880

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1881  AGGAAAGTAATAGTCCACATGTCCCTGGCATTTGTTCAGAGCAGTGTGCAGAATGTAATGCTCTTTTGTAAGAA  1954

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1955  ACGTTTTATGATTTTTAAAATAAATTTAGTGAATCTATTTTTGGTGGTCTTTTTTTTTTTTAAGACAATTTCAA  2028

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2029  ATGGTGGTTGAATTTTCCAGCCCACCCCTAAACTAAACACTAAGTTTGATTTTCAGCAGCTCCTCTGTTGGATA  2102

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2103  TAAGTGCACCTCTTGGACATAGACAAAATACATTGGCAAACTCAGTTTGGGTGACTTCTTAATGGTTGGAAAGA  2176

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2177  CTTGGCTTGATAAATTTCCATCACATATTCATGCTTATAATAAGCTTGGGATTTTGTTTGTTTTTGCAAATGTT  2250

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2251  TGCCACTACTTTTCAACAGTTTTCTGTTAGTTGTGGAGAACTGCGGTGGGGAGCAATACTACAAGAGTTACGCA  2324

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2325  TCTTAAGTATATGCCAGAAGCCTGATGGGCAATGAGCTTTATTAACCAGAGTAAACTTGGTTATGGAAGTGGCT  2398

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2399  GATGCTGAATAAATCCTGGTTATTTTTGTTAGATAATTTCTCACCTATAGACTTAAAGCTGTCAACCTGCTAGT  2472

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2473  GTCTTGTTAGTTGAACTTTGTAAAAATATATATATATACTTGTTTTTCCATTGTATGCACAATGAAAGAAAAAA  2546

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2547  GATGTACCATTTCTCTGTTGTGTGTTGAATTATGTAGGAAATGTTTGTGAACGATTCGAAAAAAATGGAAAAAG  2620

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2621  TTCCTGTGGATGTTTTGTGTAGTAACTTGGCATCTGTATTGATAGTTCAAAATCCACATCTAAATAAAACTTCC  2694

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2695  ATGATGTTAGTTATGACGTGTGCCCAATTTGAAAAGGGGTTGATTAATACATGTAAAGTTTGTTGAAGTGTTCC  2768

Query 1390  -------------------------------  1389
                                           
Sbjct 2769  TCTTGTAAGGAAATACAGTAATCTTAAATTA  2799

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