Nucleotide Global Alignment

Description

Query:
TRCN0000469087
Subject:
NM_001297589.1
Aligned Length:
2197
Identities:
1579
Gaps:
422

Alignment

Query    1  ------------------------------------------------------------------ATGACCAC  8
                                                                              ||||||||
Sbjct    1  ATGATTTCACCTTCACTTGAACTGCTTCATTCAGGACTCTGCAAATTCCCTGAAGTAGAAGGAAAAATGACCAC  74

Query    9  GTTCAAGGAGGCAATGACCTTCAAGGACGTGGCTGTGGTCTTCACTGAGGAAGAGCTGGGGCTGCTGGACCTTG  82
            .|||||.||||||.||||.||||||||.|||||||||||||||||||||||.|||||||||||||||||||.||
Sbjct   75  ATTCAAAGAGGCAGTGACATTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCTGGACCCTG  148

Query   83  CTCAGAGGAAGCTGTATCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGT-GGGACATCAAGCATT  155
            |.||||||||||||||.||||||||||||||.|||||||||||||||||||||||||| |||| |||||.||||
Sbjct  149  CCCAGAGGAAGCTGTACCGAGATGTGATGCTAGAGAACTTCAGGAACCTGCTCTCAGTAGGGA-ATCAACCATT  221

Query  156  CCACAGGGATACTTTCCACTTCCTAAGGGAA-GAAAAGATTTGGATGATGAAGACAGCAATCCAAAGGGAAGGG  228
            ||||...|||||||||||||| ||.|||||| ||||||.||||||.||||||||||.|||.||||||.||||||
Sbjct  222  CCACCAAGATACTTTCCACTT-CTTAGGGAAGGAAAAGTTTTGGAAGATGAAGACAACAAGCCAAAGAGAAGGG  294

Query  229  AATTCAGGAGACAAGATCCAAACTGAGATGGAGACTGTTTCAGAAGCAGGAACACATCAAGAGTGGTCCTTCCA  302
            ||||||||||.|||||||||||.||||||||||||||||.|||||||||||.|||||.||||||||||||..||
Sbjct  295  AATTCAGGAGGCAAGATCCAAATTGAGATGGAGACTGTTCCAGAAGCAGGACCACATGAAGAGTGGTCCTGTCA  368

Query  303  GCAAATCTGGGAAAAAATTGCAAGTGATTTAACCAGGTCTCAAGACTTGGTGATAAATAGCTCTCAGTTCTCCA  376
            ||||||.||||||.|||||||||||||..||||||||||||||.|||...|.|..||.|||||||||||||.||
Sbjct  369  GCAAATATGGGAACAAATTGCAAGTGACCTAACCAGGTCTCAAAACTCCATAAGGAACAGCTCTCAGTTCTTCA  442

Query  377  AAGAAGGTGATTTCCCCTGCCAGACTGAGGCAGGACTATCTGTAATTCAC--ACAAGACAGAAATCTTCCCAGG  448
            |||||||||||.||||||||||||.|||||||.||||||||.|||.||||  .||  |||||||.|||.||...
Sbjct  443  AAGAAGGTGATGTCCCCTGCCAGATTGAGGCAAGACTATCTATAAGTCACGTGCA--ACAGAAACCTTACCGTT  514

Query  449  GCAATGGATATAAACCATCCTTCAGTGATGTCTCCCTCTTTGATTTTCATCAACAATTACACTCAGGAGAGAAA  522
            |.||||.||.|||||..||||||||||||||.||..||||||||.||||||||||||.||||||||||||||||
Sbjct  515  GTAATGAATGTAAACAGTCCTTCAGTGATGTTTCTGTCTTTGATCTTCATCAACAATCACACTCAGGAGAGAAA  588

Query  523  TCTCATACGTGTGATGAGTGTGGAAAGAACTTTTGTTACATCTCAGCCCTTCGTATTCATCAGAGAGTCCACAT  596
            ||||||||.||||.||||||||||||.|.|||.|||||||.|.|||||||||.||||||||||||||||||.||
Sbjct  589  TCTCATACATGTGGTGAGTGTGGAAAAAGCTTCTGTTACAGCCCAGCCCTTCATATTCATCAGAGAGTCCATAT  662

Query  597  GGGAGAGAAATGCTATAAGTGTGACGTGTGTGGTAAGGAATTCAGTCAGAGTTCACATCTGCAAACTCATCAGA  670
            ||||||.|||||||||||||||||.|||||||||||||||||.|.||||||.||||||||||||||||||||||
Sbjct  663  GGGAGAAAAATGCTATAAGTGTGATGTGTGTGGTAAGGAATTTAATCAGAGCTCACATCTGCAAACTCATCAGA  736

Query  671  GAGTCCACACTGGAGAGAAACCGTTCAAATGTGTGGAATGTGGGAAAGGCTTCAGTCGTAGATCAGCACTTAAT  744
            |||||||.||||||||||||||.||||||||||.|.|||||||||||||||||..|.|||||||||||||||||
Sbjct  737  GAGTCCATACTGGAGAGAAACCATTCAAATGTGGGCAATGTGGGAAAGGCTTCCATAGTAGATCAGCACTTAAT  810

Query  745  GTTCATCACAAATTACACACAGGAGAGAAACCTTATAATTGTGAGGAATGCGGGAAGGCCTTCATTCACGATTC  818
            ||||||..||||||.|||||||||||||||||||||||||||||||||||.|||||.|||||||||||.|||||
Sbjct  811  GTTCATTGCAAATTGCACACAGGAGAGAAACCTTATAATTGTGAGGAATGTGGGAAAGCCTTCATTCATGATTC  884

Query  819  CCAGCTTCAAGAACATCAGAGAATCCATACGGGGGAGAAGCCATTCAAATGTGATATATGTGGTAAGAGCTTCT  892
            .|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||.
Sbjct  885  ACAGCTTCAAGAACATCAGAGAATCCATACTGGGGAGAAGCCATTCAAATGTGATATATGTGGTAAGAGCTTCC  958

Query  893  GTGGTAGATCAAGACTTAATAGGCATTCCATGGTTCACACGGCAGAGAAACCATTCCGATGTGATACGTGTGAT  966
            |||.||||||||||||||||||||||||||||||||||||.|.|||.|||||||||.||||||||||.||||..
Sbjct  959  GTGTTAGATCAAGACTTAATAGGCATTCCATGGTTCACACAGGAGAAAAACCATTCAGATGTGATACATGTGGC  1032

Query  967  AAGAGCTTTCGTCAGAGATCAGCACTTAATAGTCATCGCATGATCCACACAGGAGAGAAACCATACAAATGTGA  1040
            ||||.|||||||||||||||||||||||||||||||..||||.||||||.||.||||||.||||||||||||||
Sbjct 1033  AAGAACTTTCGTCAGAGATCAGCACTTAATAGTCATTCCATGGTCCACATAGAAGAGAAGCCATACAAATGTGA  1106

Query 1041  GGAGTGTGGAAAAGGCTTTATTTGTAGGCGAGATCTTTATACGCATCATATGGTCCACACGGGAGAAAAGCCAT  1114
            |.|.||||||||||||||.|||||||||||||||.|||.||.||||||.|||||||||||.|||||.||.||||
Sbjct 1107  GCAATGTGGAAAAGGCTTCATTTGTAGGCGAGATTTTTGTAAGCATCAGATGGTCCACACAGGAGAGAAACCAT  1180

Query 1115  ATAATTGTAAAGAGTGTGGGAAGAGCTTCAGATGGGCCTCGTGTCTTTTGAAACATCAGCGAGTCCACAGTGGA  1188
            |||||||||||||.||||||||||.||||||||||.||||.|||||||||||.|||||||.|||||||||||||
Sbjct 1181  ATAATTGTAAAGAATGTGGGAAGACCTTCAGATGGTCCTCATGTCTTTTGAACCATCAGCAAGTCCACAGTGGA  1254

Query 1189  GAAAAACCATTCAAATGTGAAGAATGTGGGAAAGGATTTTACACAAATTCACAATGCTATTCCCACCAGAGATC  1262
            .|||||.|.|||||||||||||||||||||||.||||||||.||||||||||.|.|.|.||||||.||||||||
Sbjct 1255  CAAAAATCCTTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACGACGATCTTCCCATCAGAGATC  1328

Query 1263  CCATAGTGGAGAAAAACCATACAAATGTGTGGAGTGTGGGAAGGGCTACAAAAGGAGGTTGGATCTTGACTTTC  1336
            |||.|.|||||||||.|||||.||.||||.|||||||||.||||.|||.||||||||||||||||||||.||||
Sbjct 1329  CCACAATGGAGAAAAGCCATATAACTGTGAGGAGTGTGGTAAGGACTATAAAAGGAGGTTGGATCTTGAGTTTC  1402

Query 1337  ACCAGCGCGTCCATACAGGAGAGAAACTGTATAATTGTAAGGAATGTGGGAAGAGCTTTAGTCGGGCCCCATGT  1410
            |||||.|.|||||.||.||.||||.||..||||||||||||||||||||.|||||||||.|..|||||.|.|||
Sbjct 1403  ACCAGAGGGTCCACACGGGTGAGAGACCCTATAATTGTAAGGAATGTGGCAAGAGCTTTGGCTGGGCCTCCTGT  1476

Query 1411  CTTTTGAAACATGAGAGACTCCACAGTGGAGAAAAACCATTCCAATGTGAAGAGTGTGGGAAGAGATTTACTCA  1484
            ||||||||||||.||||||||||||||||.||||||||.|||.||||||||||||||||.||||||||||||||
Sbjct 1477  CTTTTGAAACATCAGAGACTCCACAGTGGGGAAAAACCTTTCAAATGTGAAGAGTGTGGAAAGAGATTTACTCA  1550

Query 1485  AAATTCACATCTTCATTCCCATCAGAGAGTTCACACTGGAGAAAAGCCATACAAATGTGAGAAGTGTGGAAAGG  1558
            .|.||||||.||||||||||||||||.|...||.|||||||||||||.|||||||||||||.||||||..||||
Sbjct 1551  GAGTTCACAACTTCATTCCCATCAGACATGCCATACTGGAGAAAAGCTATACAAATGTGAGCAGTGTGAGAAGG  1624

Query 1559  GCTACAATAGTAAGTTTAATCTTGATATGCACCAGAAGGTCCACACAGGAGAGAGACCATACAATTGTAAGGAA  1632
            |.|||||.|||||.|||||||||||.||||||||||.|||||||...||||||.||||.||.||||||||||||
Sbjct 1625  GGTACAACAGTAAATTTAATCTTGACATGCACCAGAGGGTCCACGGGGGAGAGCGACCCTATAATTGTAAGGAA  1698

Query 1633  TGTGGGAAGAGCTTTGGCTGGGCCTCGTGTCTTTTGAAACATCAGAGACTGCACAGTGGAGAAAAACCATTCAA  1706
            |||||.|||||||||||||||||.||.|||||||||||||||||||||||.||||||||||||||.|||||.||
Sbjct 1699  TGTGGAAAGAGCTTTGGCTGGGCTTCATGTCTTTTGAAACATCAGAGACTCCACAGTGGAGAAAAGCCATTGAA  1772

Query 1707  ATGTGAAGAGTGTGGGAAAAGATTTACTCAGAATTCACAGCTTCATTCTCATCA--AAG----AGTGCACACTG  1774
            ||.||  |||||||||||.||||.|||||||||||||||||||||||..|||||  |||    .|||      |
Sbjct 1773  ATCTG--GAGTGTGGGAAGAGATCTACTCAGAATTCACAGCTTCATTTACATCAGTAAGTCTATGTG------G  1838

Query 1775  GAGAAAAGCCATACAAATGTGATGAGTGTGGGAAGGGCTTCAGCTGGTCCTCAACTCGTCTGACCCATCAGAGA  1848
            |||||||||||||                                                             
Sbjct 1839  GAGAAAAGCCATA-------------------------------------------------------------  1851

Query 1849  CGCCACAGCAGAGAAACACCTCTCAAATGTGAGCAGCATGGGAAGAACATTGTACAGAATTCATTCTCTAAAGT  1922
                                                                                      
Sbjct 1852  --------------------------------------------------------------------------  1851

Query 1923  GCAAGAAAAAGTTCACAGTGTAGAAAAGCCATACAAATGTGAGGACTGTGGGAAGGGCTACAACAGGCGCTTGA  1996
                                                                                      
Sbjct 1852  --------------------------------------------------------------------------  1851

Query 1997  ATCTTGATATGCATCAGAGGGTCCACATGGGAGAGAAAACATGGAAGTGTAGGGAGTGTGATATGTGCTTTAGT  2070
                                                                                      
Sbjct 1852  --------------------------------------------------------------------------  1851

Query 2071  CAGGCCTCAAGCCTTCGACTTCATCAGAATGTTCATGTTGGAGAAAAACCT  2121
                                                               
Sbjct 1852  ---------------------------------------------------  1851

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