Nucleotide Global Alignment

Description

• Query: TRCN0000469087
• Subject: XM_005259215.4
• Aligned Length: 2145
• Identities: 1379
• Gaps: 555

Alignment

Query    1  ATGACCACGTTCAAGGAGGCAATGACCTTCAAGGACGTGGCTGTGGTCTTCACTGAGGAAGAGCTGGGGCTGCT  74
            ||||||||.||||||||||||.|||||||||||||.|||||||||||||||||||||||.||||||||||||||
Sbjct    1  ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT  74

Query   75  GGACCTTGCTCAGAGGAAGCTGTATCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGACATC  148
            |||||.|||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct   75  GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC  148

Query  149  AAGCATTCCACAGGGATACTTTCCACTTCCTAAGGGAAGAAAAGATTTGGATGATGAAGACAGCAATCCAAAGG  222
            ||.|.||||||...|||||||.||||||||||||||||||||||.|||||||||||..||||||||.||||||.
Sbjct  149  AACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGGGACAGCAACCCAAAGA  222

Query  223  GAAGGGAATTCAGGAGACAAGATCCAAACTGAGATGGAGACTGTTTCAGAAGCAGGAACACATCAAGAGTGGTC  296
            ||||||||||||||||.||||||||||||||||.|||||.|||||.|||||||||||.|||||.||||||||||
Sbjct  223  GAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAGCACATGAAGAGTGGTC  296

Query  297  CTTCCAGCAAATCTGGGAAAAAATTGCAAGTGATTTAACCAGGTCTCAAGACTTGGTGATAAATAGCTCTCAGT  370
            ||.||||||||||||||||.|||||||||..||.||||||||||||||.||||...|.|||||||.||||||||
Sbjct  297  CTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCAGGTCTCAGGACTCTATCATAAATAACTCTCAGT  370

Query  371  TCTCCAAAGAAGGTGATTTCCCCTGCCAGACTGAGGCAGGACTATCTGTAATTCACACAAGACAGAAATCTTCC  444
            |||...||.|.||||||.||||||.||||..|||.|||||||||.|...||||||.|||.||||||||.|||||
Sbjct  371  TCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGACTACCCACAATTCATACAGGACAGAAACCTTCC  444

Query  445  CAGGGCAATGG---ATATAAACCATCCTTCAGTGATGTCTCCC-TCTTTGATTTTCATCAACAATTACACTCAG  514
            |||||   |||   .|.|||||..|||.|||||||||| |||| ||||||||.|||.|||.||.|||.||||||
Sbjct  445  CAGGG---TGGGAAGTGTAAACAGTCCATCAGTGATGT-TCCCATCTTTGATCTTCCTCAGCAGTTATACTCAG  514

Query  515  GAGAGAAATCTCATACGTGTGATGAGTGTGGAAAGAACTTTTGTTACATCTCAGCCCTTCGTATTCATCAGAGA  588
            .||||||.|||.||||.|||||||||||||||||.|.|.|.||||||||||||||.||||.|.|||||||||||
Sbjct  515  AAGAGAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCTGTTACATCTCAGCTCTTCATGTTCATCAGAGA  588

Query  589  GTCCACATGGGAGAGAAATGCTATAAGTGTGACGTGTGTGGTAAGGAATTCAGTCAGAGTTCACATCTGCAAAC  662
            ||||||.|||||||||||..||.||.||||||.||||||||.||||||||.|||||.||.||||||||||||||
Sbjct  589  GTCCACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTCAAAGCTCACATCTGCAAAC  662

Query  663  TCATCAGAGAGTCCACACTGGAGAGAAACCGTTCAAATGTGTGGAATGTGGGAAAGGCTTCAGTCGTAGATCAG  736
            ||||||||||||||||||||||||||||||.||||||||||.|.|||||||||||||.||||||||||||||||
Sbjct  663  TCATCAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAG  736

Query  737  CACTTAATGTTCATCACAAATTACACACAGGAGAGAAACCTTATAATTGTGAGGAATGCGGGAAGGCCTTCATT  810
            |||||||||||||||..||||||||||||||||||||||||||.|.||||||||.|||.|||||||||||||||
Sbjct  737  CACTTAATGTTCATCGTAAATTACACACAGGAGAGAAACCTTACATTTGTGAGGCATGTGGGAAGGCCTTCATT  810

Query  811  CACGATTCCCAGCTTCAAGAACATCAGAGAATCCATACGGGGGAGAAGCCATTCAAATGTGATATATGTGGTAA  884
            ||.||||||||||||.|.||||||.|||||||||||||.||||||||.||||||||||||||||||||||||||
Sbjct  811  CATGATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAATGTGATATATGTGGTAA  884

Query  885  GAGCTTCTGTGGTAGATCAAGACTTAATAGGCATTCCATGGTTCACACGGCAGAGAAACCATTCCGATGTGATA  958
            ||.|||||.|..|||.|||||||||||.||.|||||||||||||||||.|.|||.||||||||..|.|||||||
Sbjct  885  GACCTTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGTTCACACAGGAGAAAAACCATTTAGGTGTGATA  958

Query  959  CGTGTGATAAGAGCTTTCGTCAGAGATCAGCACTTAATAGTCATCGCATGATCCACACAGGAGAGAAACCATAC  1032
            |.||||||||||||||||.|||||||||||||||||||||.|||.|||||.|||||||||||||||||||.|||
Sbjct  959  CATGTGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGCATTGCATGGTCCACACAGGAGAGAAACCGTAC  1032

Query 1033  AAATGTGAGGAGTGTGGAAAAGGCTTTATTTGTAGGCGAGATCTTTATACGCATCATATGGTCCACACGGGAGA  1106
            |.|||||||.||||||||||||||||||||.||||||.||||.||||||.||||||..||||||||||.|||||
Sbjct 1033  AGATGTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATCAGGTGGTCCACACAGGAGA  1106

Query 1107  AAAGCCATATAATTGTAAAGAGTGTGGGAAGAGCTTCAGATGGGCCTCGTGTCTTTTGAAACATCAGCGAGTCC  1180
            |||.|||||||||||||||||.|||||||||||||||||||||.||||.||.||||||||.|||||||||||||
Sbjct 1107  AAAACCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATGCCTTTTGAACCATCAGCGAGTCC  1180

Query 1181  ACAGTGGAGAAAAACCATTCAAATGTGAAGAATGTGGGAAAGGATTTTACACAAATTCACAA-TGCTATTCCCA  1253
            ||||||||||||||...||||||||||||||||||||.||.||||||||.|||||||||||| || |.||||||
Sbjct 1181  ACAGTGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGAAAGGGATTTTATACAAATTCACAACTG-TCTTCCCA  1253

Query 1254  CCAGAGATCCCATAGTGGAGAAAAACCATACAAATGTGTGGAGTGTGGGAAGGGC-----TACAAAAGGAGGTT  1322
            .|||||||||||.|||||.|||||.|||||.|||||||.||||||||||||||||     |||.||     |||
Sbjct 1254  TCAGAGATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGTGTGGGAAGGGCTATGTTACTAA-----GTT  1322

Query 1323  GGATCTTGACTTTCACCAGCGCGTCCATACAGGAGAGAAACTGTATAATTGTAAGGAATGTGGGAAGAGCTTTA  1396
            ..||||||||||.||||||.|.|||||.||.|||||||.||..|||||||||||||||||||||||||.|||||
Sbjct 1323  TAATCTTGACTTGCACCAGAGGGTCCACACGGGAGAGAGACCTTATAATTGTAAGGAATGTGGGAAGAACTTTA  1396

Query 1397  GTCGGGCCCCATGTCTTTTGAAACATGAGAGACTCCACAGTG---GAGAAAAACCATTCCAATGTGAAGAGTGT  1467
            |.||||||.||.||.|||||||.|||.|||||||||||  ||   || |||||||||||.|||||||.||.|||
Sbjct 1397  GCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCAC--TGCCAGA-AAAAACCATTCAAATGTGAGGACTGT  1467

Query 1468  GGGAAGAG--ATTTACTCAAAATTCACATCTTCATTCCCATCAGAGAGTTCACACTGGAGAAAAGCCATACAAA  1539
            ||.|||||  .|.|||.||..|  ||.|.|.|.|...|||.|.|||||...|.|.|||.|||||.||||.||||
Sbjct 1468  GGAAAGAGGCTTGTACACAGGA--CATACCGTAAAGACCAGCCGAGAGACTATAGTGGGGAAAACCCATCCAAA  1539

Query 1540  TGTGAGAAGTGTGGAAAGGGCTACAATAGTAAGTTTAATCTTGATATGC----ACCAGAAGGTC-----CACAC  1604
            ||||||.|.|||||.|...|||||||.||....||.|||||.|||||.|    |.||..|..||     .||||
Sbjct 1540  TGTGAGGATTGTGGGAGACGCTACAAGAGGCGCTTGAATCTGGATATACTTTTATCATTATTTCTAAATGACAC  1613

Query 1605  AGGAGAGAGACCATACAATTGTAAGGAATGTGGGAAGAGCTTTGGCTGGGCCTCGTGTCTTTTGAAACATCAGA  1678
            |                                                                         
Sbjct 1614  A-------------------------------------------------------------------------  1614

Query 1679  GACTGCACAGTGGAGAAAAACCATTCAAATGTGAAGAGTGTGGGAAAAGATTTACTCAGAATTCACAGCTTCAT  1752
                                                                                      
Sbjct 1615  --------------------------------------------------------------------------  1614

Query 1753  TCTCATCAAAGAGTGCACACTGGAGAAAAGCCATACAAATGTGATGAGTGTGGGAAGGGCTTCAGCTGGTCCTC  1826
                                                                                      
Sbjct 1615  --------------------------------------------------------------------------  1614

Query 1827  AACTCGTCTGACCCATCAGAGACGCCACAGCAGAGAAACACCTCTCAAATGTGAGCAGCATGGGAAGAACATTG  1900
                                                                                      
Sbjct 1615  --------------------------------------------------------------------------  1614

Query 1901  TACAGAATTCATTCTCTAAAGTGCAAGAAAAAGTTCACAGTGTAGAAAAGCCATACAAATGTGAGGACTGTGGG  1974
                                                                                      
Sbjct 1615  --------------------------------------------------------------------------  1614

Query 1975  AAGGGCTACAACAGGCGCTTGAATCTTGATATGCATCAGAGGGTCCACATGGGAGAGAAAACATGGAAGTGTAG  2048
                                                                                      
Sbjct 1615  --------------------------------------------------------------------------  1614

Query 2049  GGAGTGTGATATGTGCTTTAGTCAGGCCTCAAGCCTTCGACTTCATCAGAATGTTCATGTTGGAGAAAAACCT  2121
                                                                                     
Sbjct 1615  -------------------------------------------------------------------------  1614