Nucleotide Global Alignment
Description
- Query:
- TRCN0000469087
- Subject:
- XM_024451694.1
- Aligned Length:
- 2178
- Identities:
- 1377
- Gaps:
- 588
Alignment
Query 1 ATGACCA-----------------------CGTTCA----------AGGAGGCAATGACCTTCAAGGACGTGGC 41
||||..| .||||| ||||||||.|||||||||||||.|||||
Sbjct 1 ATGATAAAGAGAAGCAAAGTACTTGTATTCTGTTCAAAGATTATGGAGGAGGCAGTGACCTTCAAGGATGTGGC 74
Query 42 TGTGGTCTTCACTGAGGAAGAGCTGGGGCTGCTGGACCTTGCTCAGAGGAAGCTGTATCGAGATGTGATGCTGG 115
||||||||||||||||||.|||||||||||||||||||.|||.||||||||||||||.||||||||||||||||
Sbjct 75 TGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCTGGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGG 148
Query 116 AGAACTTCAGGAACCTGCTCTCAGTGGGACATCAAGCATTCCACAGGGATACTTTCCACTTCCTAAGGGAAGAA 189
||||||||||||||||||||||||||||.||||||.|.||||||...|||||||.|||||||||||||||||||
Sbjct 149 AGAACTTCAGGAACCTGCTCTCAGTGGGGCATCAACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAAGAA 222
Query 190 AAGATTTGGATGATGAAGACAGCAATCCAAAGGGAAGGGAATTCAGGAGACAAGATCCAAACTGAGATGGAGAC 263
|||.|||||||||||..||||||||.||||||.||||||||||||||||.||||||||||||||||.|||||.|
Sbjct 223 AAGTTTTGGATGATGGGGACAGCAACCCAAAGAGAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTC 296
Query 264 TGTTTCAGAAGCAGGAACACATCAAGAGTGGTCCTTCCAGCAAATCTGGGAAAAAATTGCAAGTGATTTAACCA 337
||||.|||||||||||.|||||.||||||||||||.||||||||||||||||.|||||||||..||.|||||||
Sbjct 297 TGTTCCAGAAGCAGGAGCACATGAAGAGTGGTCCTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCA 370
Query 338 GGTCTCAAGACTTGGTGATAAATAGCTCTCAGTTCTCCAAAGAAGGTGATTTCCCCTGCCAGACTGAGGCAGGA 411
|||||||.||||...|.|||||||.|||||||||||...||.|.||||||.||||||.||||..|||.||||||
Sbjct 371 GGTCTCAGGACTCTATCATAAATAACTCTCAGTTCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGA 444
Query 412 CTATCTGTAATTCACACAAGACAGAAATCTTCCCAGGGCAATGG---ATATAAACCATCCTTCAGTGATGTCTC 482
|||.|...||||||.|||.||||||||.|||||||||| ||| .|.|||||..|||.|||||||||| ||
Sbjct 445 CTACCCACAATTCATACAGGACAGAAACCTTCCCAGGG---TGGGAAGTGTAAACAGTCCATCAGTGATGT-TC 514
Query 483 CC-TCTTTGATTTTCATCAACAATTACACTCAGGAGAGAAATCTCATACGTGTGATGAGTGTGGAAAGAACTTT 555
|| ||||||||.|||.|||.||.|||.||||||.||||||.|||.||||.|||||||||||||||||.|.|.|.
Sbjct 515 CCATCTTTGATCTTCCTCAGCAGTTATACTCAGAAGAGAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATC 588
Query 556 TGTTACATCTCAGCCCTTCGTATTCATCAGAGAGTCCACATGGGAGAGAAATGCTATAAGTGTGACGTGTGTGG 629
||||||||||||||.||||.|.|||||||||||||||||.|||||||||||..||.||.||||||.||||||||
Sbjct 589 TGTTACATCTCAGCTCTTCATGTTCATCAGAGAGTCCACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGG 662
Query 630 TAAGGAATTCAGTCAGAGTTCACATCTGCAAACTCATCAGAGAGTCCACACTGGAGAGAAACCGTTCAAATGTG 703
.||||||||.|||||.||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 663 CAAGGAATTTAGTCAAAGCTCACATCTGCAAACTCATCAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTG 736
Query 704 TGGAATGTGGGAAAGGCTTCAGTCGTAGATCAGCACTTAATGTTCATCACAAATTACACACAGGAGAGAAACCT 777
.|.|||||||||||||.|||||||||||||||||||||||||||||||..||||||||||||||||||||||||
Sbjct 737 AGCAATGTGGGAAAGGTTTCAGTCGTAGATCAGCACTTAATGTTCATCGTAAATTACACACAGGAGAGAAACCT 810
Query 778 TATAATTGTGAGGAATGCGGGAAGGCCTTCATTCACGATTCCCAGCTTCAAGAACATCAGAGAATCCATACGGG 851
||.|.||||||||.|||.|||||||||||||||||.||||||||||||.|.||||||.|||||||||||||.||
Sbjct 811 TACATTTGTGAGGCATGTGGGAAGGCCTTCATTCATGATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGG 884
Query 852 GGAGAAGCCATTCAAATGTGATATATGTGGTAAGAGCTTCTGTGGTAGATCAAGACTTAATAGGCATTCCATGG 925
||||||.||||||||||||||||||||||||||||.|||||.|..|||.|||||||||||.||.||||||||||
Sbjct 885 GGAGAAACCATTCAAATGTGATATATGTGGTAAGACCTTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGG 958
Query 926 TTCACACGGCAGAGAAACCATTCCGATGTGATACGTGTGATAAGAGCTTTCGTCAGAGATCAGCACTTAATAGT 999
|||||||.|.|||.||||||||..|.||||||||.||||||||||||||||.|||||||||||||||||||||.
Sbjct 959 TTCACACAGGAGAAAAACCATTTAGGTGTGATACATGTGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGG 1032
Query 1000 CATCGCATGATCCACACAGGAGAGAAACCATACAAATGTGAGGAGTGTGGAAAAGGCTTTATTTGTAGGCGAGA 1073
|||.|||||.|||||||||||||||||||.||||.|||||||.||||||||||||||||||||.||||||.|||
Sbjct 1033 CATTGCATGGTCCACACAGGAGAGAAACCGTACAGATGTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGA 1106
Query 1074 TCTTTATACGCATCATATGGTCCACACGGGAGAAAAGCCATATAATTGTAAAGAGTGTGGGAAGAGCTTCAGAT 1147
|.||||||.||||||..||||||||||.||||||||.|||||||||||||||||.|||||||||||||||||||
Sbjct 1107 TTTTTATAAGCATCAGGTGGTCCACACAGGAGAAAAACCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGAT 1180
Query 1148 GGGCCTCGTGTCTTTTGAAACATCAGCGAGTCCACAGTGGAGAAAAACCATTCAAATGTGAAGAATGTGGGAAA 1221
||.||||.||.||||||||.|||||||||||||||||||||||||||...||||||||||||||||||||.||.
Sbjct 1181 GGTCCTCATGCCTTTTGAACCATCAGCGAGTCCACAGTGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGAAAG 1254
Query 1222 GGATTTTACACAAATTCACAA-TGCTATTCCCACCAGAGATCCCATAGTGGAGAAAAACCATACAAATGTGTGG 1294
||||||||.|||||||||||| || |.||||||.|||||||||||.|||||.|||||.|||||.|||||||.||
Sbjct 1255 GGATTTTATACAAATTCACAACTG-TCTTCCCATCAGAGATCCCACAGTGGTGAAAAGCCATATAAATGTGAGG 1327
Query 1295 AGTGTGGGAAGGGC-----TACAAAAGGAGGTTGGATCTTGACTTTCACCAGCGCGTCCATACAGGAGAGAAAC 1363
|||||||||||||| |||.|| |||..||||||||||.||||||.|.|||||.||.|||||||.||
Sbjct 1328 AGTGTGGGAAGGGCTATGTTACTAA-----GTTTAATCTTGACTTGCACCAGAGGGTCCACACGGGAGAGAGAC 1396
Query 1364 TGTATAATTGTAAGGAATGTGGGAAGAGCTTTAGTCGGGCCCCATGTCTTTTGAAACATGAGAGACTCCACAGT 1437
..|||||||||||||||||||||||||.||||||.||||||.||.||.|||||||.|||.||||||||||| |
Sbjct 1397 CTTATAATTGTAAGGAATGTGGGAAGAACTTTAGCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCAC--T 1468
Query 1438 G---GAGAAAAACCATTCCAATGTGAAGAGTGTGGGAAGAG--ATTTACTCAAAATTCACATCTTCATTCCCAT 1506
| || |||||||||||.|||||||.||.|||||.||||| .|.|||.||..| ||.|.|.|.|...|||.
Sbjct 1469 GCCAGA-AAAAACCATTCAAATGTGAGGACTGTGGAAAGAGGCTTGTACACAGGA--CATACCGTAAAGACCAG 1539
Query 1507 CAGAGAGTTCACACTGGAGAAAAGCCATACAAATGTGAGAAGTGTGGAAAGGGCTACAATAGTAAGTTTAATCT 1580
|.|||||...|.|.|||.|||||.||||.||||||||||.|.|||||.|...|||||||.||....||.|||||
Sbjct 1540 CCGAGAGACTATAGTGGGGAAAACCCATCCAAATGTGAGGATTGTGGGAGACGCTACAAGAGGCGCTTGAATCT 1613
Query 1581 TGATATGC----ACCAGAAGGTC-----CACACAGGAGAGAGACCATACAATTGTAAGGAATGTGGGAAGAGCT 1645
.|||||.| |.||..|..|| .|||||
Sbjct 1614 GGATATACTTTTATCATTATTTCTAAATGACACA---------------------------------------- 1647
Query 1646 TTGGCTGGGCCTCGTGTCTTTTGAAACATCAGAGACTGCACAGTGGAGAAAAACCATTCAAATGTGAAGAGTGT 1719
Sbjct 1648 -------------------------------------------------------------------------- 1647
Query 1720 GGGAAAAGATTTACTCAGAATTCACAGCTTCATTCTCATCAAAGAGTGCACACTGGAGAAAAGCCATACAAATG 1793
Sbjct 1648 -------------------------------------------------------------------------- 1647
Query 1794 TGATGAGTGTGGGAAGGGCTTCAGCTGGTCCTCAACTCGTCTGACCCATCAGAGACGCCACAGCAGAGAAACAC 1867
Sbjct 1648 -------------------------------------------------------------------------- 1647
Query 1868 CTCTCAAATGTGAGCAGCATGGGAAGAACATTGTACAGAATTCATTCTCTAAAGTGCAAGAAAAAGTTCACAGT 1941
Sbjct 1648 -------------------------------------------------------------------------- 1647
Query 1942 GTAGAAAAGCCATACAAATGTGAGGACTGTGGGAAGGGCTACAACAGGCGCTTGAATCTTGATATGCATCAGAG 2015
Sbjct 1648 -------------------------------------------------------------------------- 1647
Query 2016 GGTCCACATGGGAGAGAAAACATGGAAGTGTAGGGAGTGTGATATGTGCTTTAGTCAGGCCTCAAGCCTTCGAC 2089
Sbjct 1648 -------------------------------------------------------------------------- 1647
Query 2090 TTCATCAGAATGTTCATGTTGGAGAAAAACCT 2121
Sbjct 1648 -------------------------------- 1647
