Nucleotide Global Alignment

Description

Query:
TRCN0000469407
Subject:
XR_002958776.1
Aligned Length:
5294
Identities:
414
Gaps:
4880

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGGGAGCGGGAGGGAGGGAGCACGGGCGGAGAGAGCGCCAGAGCCGGGCCGAGCCGCGCTGGAGTTACAAACTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TATTGTGACGCACTTACTACGACTGACGGCCGCTGCCAGACCTTCCCCAGACTTGCTGCCCTCAGCATTTTCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAAACAATGGGGCCGGAGCAGGGAACGCGGCCAGCCGCCTGCAATCGCTGCATCTGCGCCCGCTCCTGTGCTCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGCGTCCTACCTAACCCCGGGAAGTCAGAGCCGCTGGGAGTTTCTGACTTACTCGAAGAAGTCTGTCCTGGGCA  296

Query    1  ---------------------------------------------------------------ATGGCAAAGCA  11
                                                                           |||||||||||
Sbjct  297  AAGAGCACACACGAATAGACTTCAGATTAGCTGCTTCTCTGGAAACGCATAAAAAAAGACCAAATGGCAAAGCA  370

Query   12  ACCTTCTGATGTAAGTTCTGAGTGTGACCGAGAAGGTAGACAATTGCAGCCTGCGGAGAGGCCTCCCCAGCTCA  85
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACCTTCTGATGTAAGTTCTGAGTGTGACCGAGAAGGTAGACAATTGCAGCCTGCGGAGAGGCCTCCCCAGCTCA  444

Query   86  GACCTGGGGCCCCTACCTCCCTACAGACAGAGCCACAAGGTAATCCTGAAGGCAATCACGGAGGTGAAGGGGAC  159
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct  445  GACCTGGGGCCCCTACCTCCCTACAGACAGAGCCACA-------------------------------------  481

Query  160  AGCTGCCCCCACGGCAGCCCTCAGGGCCCGCTGGCCCCACCTGCCAGCCCTGGCCCTTTTGCTACCAGATCCCC  233
                                                                                      
Sbjct  482  --------------------------------------------------------------------------  481

Query  234  GCTTTTCATCTTTATGAGAAGATCCTCCCTGCTGTCTCGATCCTCCAGTGGGTATTTCTCTTTTGACACAGACA  307
                                                                                 |||||
Sbjct  482  ---------------------------------------------------------------------AGACA  486

Query  308  GGAGCCCAGCACCCATGAGTTGTGACAAATCAACACAAACCCCAAGTCCTCCTTGCCAGGCCTTCAACCACTAT  381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  487  GGAGCCCAGCACCCATGAGTTGTGACAAATCAACACAAACCCCAAGTCCTCCTTGCCAGGCCTTCAACCACTAT  560

Query  382  CTCAGTGCAATGGCTTCCATGAGGCAGGCTGAACCTGCAGATATGCGCCCAGAGATATGGATCGCCCAAGAGTT  455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  561  CTCAGTGCAATGGCTTCCATGAGGCAGGCTGAACCTGCAGATATGCGCCCAGAGATATGGATCGCCCAAGAGTT  634

Query  456  GCGGCGTATTGGAGACGAGTTTAACGCTTACTATGCAAGGAG--------------------------------  497
            ||||||||||||||||||||||||||||||||||||||||||                                
Sbjct  635  GCGGCGTATTGGAGACGAGTTTAACGCTTACTATGCAAGGAGGTTAGAGAAATAGAGGAAGTTGTCGTGTAGTT  708

Query  498  --------------------------------------------------------------------------  497
                                                                                      
Sbjct  709  GTCATGTATTCAGTCCACTTAAGGGCAGTGGGGAAGCGTTTGAGACGGAGCTGTGGAGGCTGAATCCTTGAAGG  782

Query  498  -------------------GGTATTTTTGAATAATTACCAAGCAGCCGAAGACCACCCACGAATGGTTATCTTA  552
                               |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  783  AGGAGGTGAGAGAGGCACAGGTATTTTTGAATAATTACCAAGCAGCCGAAGACCACCCACGAATGGTTATCTTA  856

Query  553  CGACTGTTACGTTACATTGTCCGCCTGGTGTGGAGAATGCAT--------------------------------  594
            ||||||||||||||||||||||||||||||||||||||||||                                
Sbjct  857  CGACTGTTACGTTACATTGTCCGCCTGGTGTGGAGAATGCATTGACAGGTTCTTTGCGGAGCCGAGATACCATG  930

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct  931  CAGACATTTTGCTTGTTCAAACCAACAAGACCCAGCACCGCGGTCTCCTGGTGCCATTATTATGCAGCCAGCGG  1004

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1005  TTCTCTTGTGGAGGGGGCAGGTGACGTTTCAGAAGACACCGAGCTGGATGGGACTACCTTTCTGTTCATCACCA  1078

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1079  CACAGCAGAATTTCTAATGGAAGTTTGTTGTGAATGTAAAGGAGGGAGCATTCTTTGCTTTTTAATATACAAAC  1152

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1153  CATGGTTTTTTGGAGCAGGATTTTGTGTAAGAATGGTGTTTACATGCAGTGTGTTTTCCCCCTCACCTTCAATA  1226

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1227  AGGTTTTTCAAAAAGGAAATGGAAACTTTTTAACCAATTTGTGAATAACTTTTGTATTAAAATTTTAAGAACCT  1300

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1301  ACGGCCTATTCTCAGAGGATTATGTAACCCCTGCAGTGGAAACTGAGCCAGCTAACTTAAAAAGCTGCCTTAGT  1374

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1375  TTATTTTTAGAGATTACAGAATTTTTAAACAGGGAGACGTGTGATATACTCCCTCCCTTCCCTACTATTGCCTC  1448

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1449  TCTGACCTTTTTAAATTATTTTTAATACCAAAAGAGTTCTTTTGAAATGGAACTGATTAAAAGGGCAGAGGGTC  1522

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1523  TGTTGCCAGCCTGCATTGATATACCAGTCCCATTTGTAAATATTTACGTACCTTTATAAATTCAGTTGCATCTG  1596

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1597  TGGCAAAATTTCAGACTATTTTTGCGTCTTTCCTCATCACTTTTTGTGATGCAACTCCAGTCTGGACTCAGATG  1670

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1671  CATAGATTTGGTCCAGTGTATTTTCATGATAAAGTGAAATTGAGTCAGAACAAGAGTTAATATCTGCCTGTATC  1744

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1745  TTGCACAGTTCGAGCGATCTGTTATTAACTGGGAAGCATTTGGTGTTGGTTTTCATTCCATTTCGACGAGCATG  1818

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1819  TTATTGGGAAGTATTCTGAAGAGGCAATAGCAGTAATAACAACAGACTTAAGTGCTACGCCCCTTTGTGCTGCT  1892

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1893  GGCTTTTCTGGTTGCAGGCTTTCCCATGGTCACAGGATGCACTGTCAGCATCAGGTCCCAGAGGGCCACCGTGT  1966

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 1967  CCATTACAGCAGAGTCCAGCTGCAGCATCCAGCTCACGCCCTCATGGGAATTGGCACAGGCCTGGGGCAGGGCT  2040

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2041  TCTGATGGCCATTTGCTTGGCCTCCTGCATTTTAGTCCAACTCACAGTCCACTAGCTTCACTCCTTTAAATTCA  2114

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2115  CTTTGAAACAGGCCTCATCCCACTTCCACCAGCACCATAGAAGAATAATTCTGGGCAGAAGTCTGTTTTTTTTC  2188

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2189  ATTTTTCCAGGACAGTTGGATATTGTCAGGCCACTTGTGACCCCAGCCATGTAGTGAGGGTGCTCTTTCTCTGT  2262

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2263  GCCTGCTCCTTATGAGTGCAGTGGAAGGAAGCCACACACTGGTCAGTCATTTCAGAGGCAGCAGATGCCCAGGG  2336

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2337  AGACCCAAGAAAGAGTCAGGTTAGGGAGCAGTGAAAGTGAGGAGGGAAGACAATTCTGTGAACTCTGTAACTCT  2410

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2411  TAAAATTTTTGAAAACTCCATCGTTAAACAACTTTTAAAAGAAATAACTAAATTTTCAAATGAGTAAGCAGTGC  2484

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2485  CACCAACTAGTGTTTTGCCCGATAGAAGAGCCAGCATGTTCACGTTATTTAAATTAGGTGGAAAAATCTAAACA  2558

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2559  TTTTTATCTTCATAATTTAAAAAATATATATGTATATATTGCATATTCACTTTTTCCTTTAGGTAGAGATGATT  2632

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2633  TCAATCCAAATACTCTTACTTTAAAAAATTTCCTTTCCCCAAGAATCTCCTTGGGACTTTGACTTATTTTTAAA  2706

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2707  GCTGTGTTGGAGCTCATCTTGTTCCCTGATGTGTCTCGAGCCCATTGGTAGGGTCATACAAAGCCCACGGTTAC  2780

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2781  AAGCAGTGGTAGGATTGCAGCCGTGGGCCTGCTGGACACACACATACACCAAAGATGTATTTGGATCTGGGCAC  2854

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2855  CCCCTCCCAGGATCCCTGTACTCACGTGCCAGTCTCCTGACTAGAGCACTTTACTCTGTTTCCTCAGCCCTGCA  2928

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 2929  GCCCCTGGGAGCACACACTGGGTGCAGCCCTGGGCCAGGCACGGGAGGCCCTGCCCTGTGCTGCCCAGGGGCTG  3002

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3003  TGTGCACCACATGAGCACATTTCCCTCTGGCCTGGCGGCCTCCAGGCTGGCTGTGGAAACAGTTCCTGAGGAAA  3076

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3077  TTAGAGATTCTATGAATTGTAGGAGTATTAAAGACCAGGCTGTTGGCACCAGAACTTAAAGCGATGACTGGATG  3150

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3151  TCTCTGTACTGTATGTATCTGGTTATCAAGATGCCTCTGTGCAGAAAGTATGCCTCCCGTGGGTATACGTTTTT  3224

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3225  ACCTTTTTTAAAAAACATTTTTGTAGAAAAAATAATTAAATCCCCTTTTTGGAAACTTACTGCAGGTTTTGTGC  3298

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3299  CTTGACAACCTCTCCCTATGTGAGGTTTGTAAAAAGTGTCCTGTGACTTAACACAGAAACGCAATAAACACACA  3372

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3373  CAAAATAGTTTCATGAGTGATTCTTCAGATGCCCTTCCCAACTGGTTAGTTGATCAAGAATTTTGGGGGTGGGG  3446

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3447  GTTGCGGAGAAATCAAGTTTAAAATTCCTTCTGATTAAAAAAATATAGTGGAATACAATTGTCTGCCGTTTCCC  3520

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3521  CTTCTTAATGTATATATTGTGAGTATTTATTAGATTCGTAGGTCATATTACTTATCAACTGAGCCAAATGTCTG  3594

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3595  TGTGCAATTGTGTTTCCTTTACCTTGTAAAATTTTGTACAGCATAAATAAGTAAAAAAATCACTGTTTTTCTCA  3668

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3669  ACTTTTTCAAAATCAAGGATTGTAAATATTGTAGATTCTTTTTCTGTGTGATGTGTCCTACTGTTTCATAATGC  3742

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3743  TGTAACTTGTAGAAATATTGTATATTTATTTTCTGCTTATTTAATGTCTTAATTTCTGAAAAGTATTAACATCC  3816

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3817  CTGTCTCCCACTCCCCTGCCGTCCCATGAAGTTAACTCCTGAGAGTTGTCGGGGGTGACTGGAGAGCTCATTGC  3890

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3891  AGACCACGTGGTCCTCCAGGGTGGCTCTCCACCTTCGGGTCCTGGTATTTCCAGTCAAGTGGGTTTCAATTCTT  3964

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 3965  GGGCTTTGCCGCCCTTATGATGAAGTGTGTGTTTGATGCCAGTGAGAAACTCAGTCTGGCAGGCTACAAAATTC  4038

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4039  TACTCCAAGAAATACCCAGCAACCTTCTGTTTGTTCCAAAGCAACTAGCTTATCATGCAAGCAAATTTTGCTGA  4112

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4113  CTCCAGGCTTTATCTTTAGGAAAACAAAAAAACCAAAGTATTATCAGCAGGTGGGAAAGATTTTTCTATTGAAA  4186

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4187  ATTTATCCCTGACAACTCAGCGTTTAGAAAAGAAATAAAATGTGCCACTTCCAGAGGTGCTGCATTGCAGTTGT  4260

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4261  TCAGGGCTAGGGCCAGGCAGGACAAGTGAATGGGTGGGACAGGTGGCTCCTGCCTAAGGACCACCTCAGGCCAC  4334

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4335  TAACCCCTTGTGGACAACTGTGAGTAGCTGGGTTTTCCCCCACCTGCTGTGCAACTTCCTGTGCTTTGAGGTTG  4408

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4409  GACTAACTTGTCTTCAGGAGCTAATTAACTGTACAGCCCTCCCCACGCCCCACCCATACGGTCACTGCATTTGG  4482

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4483  TCAGCCTGCTTCTTCAGGTCGATGCCCTCCTTCTGATACTCCATCTCCTTCAGGGGAGGTTGGGGCCCCACTGG  4556

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4557  ACTGGGTGTCAAGATGTGAAAGCTTATGGGAGCTTTAAGGAGACTTCATGGTGGTTCCATGCAGGTGGTTCTGC  4630

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4631  CATCCCTGCTGATTTAGCCTGGTGCCTGTGTGTGTCCACTCACGTACACGTGGGGTGGGGGAAACGTGTCTACA  4704

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4705  GATGACGCTAAATCAGTTGGGGTCTACTCTAAACAGCATTGTGTGTAAGAAGCATCCTCAAGCTCCCAGTTAAG  4778

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4779  TAACTTGACTACTTTTATTTGGGAATTTCAGACTATAGAAGCTCTCTTATGTTTTATGTCCAGATTCTGTGACC  4852

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4853  ACTAGTTACTGTATCAGAACTCATCAGGTACCCACTTATAAATAGCACTGATCTGGCTGTATACTGATCCATCA  4926

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 4927  CTAACCTGTTTTCTAGGACCCAGCGTATGTAGCATTTGTATTGCAGTTTCCCTGGCTTACTTGTGTTTTGCACT  5000

Query  595  --------------------------------------------------------------------------  594
                                                                                      
Sbjct 5001  GATGAATTTTGACAGGGTAATTGCCACTTTACTTGTGCAATACTGCTGTAAATAACTGCAGATTTTTAAACAAT  5074

Query  595  ----------------------------------------  594
                                                    
Sbjct 5075  CTTTTATGTTAATTTTATAAAAATAAAACTTTCAACTAGT  5114

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