Nucleotide Global Alignment
Description
- Query:
- TRCN0000469869
- Subject:
- NR_157096.2
- Aligned Length:
- 6300
- Identities:
- 1219
- Gaps:
- 5057
Alignment
Query 1 ATGGACTCCAAAGAATCATTAACTCCTGGTAGAGAAGAAAACCCCAGCAGTGTGCTTGCTCAGGAGAGGGGAGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGTGATGGACTTCTATAAAACCCTAAGAGGAGGAGCTACTGTGAAGGTTTCTGCGTCTTCACCCTCACTGGCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTTTGGTTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CAGCCAGATCTGTCCAAAGCAGTTTCACTCTCAATGGGACTGTATATGGGAGAGACAGAAACAAAAGTGATGGG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AAATGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGGAAACAGACTTAAAGCTTTTGGAAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAAGCATTGCAAACCTCAATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCACTGCTGTGTCT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GCTGCCCCCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTCAGAACAGCAACATTTGAAGGGCCA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAGCACCTTTGACATTTTGCAGGATTTGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AGTTTTCTTCTGGGTCCCCAGGTAAAGAGACGAATGAGAGTCCTTGGAGATCAGACCTGTTGATAGATGAAAAC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 TGTTTGCTTTCTCCTCTGGCGGGAGAAGACGATTCATTCCTTTTGGAAGGAAACTCGAATGAGGACTGCAAGCC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TCTCATTTTACCGGACACTAAACCCAAAATTAAGGATAATGGAGATCTGGTTTTGTCAAGCCCCAGTAATGTAA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CACTGCCCCAAGTGAAAACAGAAAAAGAAGATTTCATCGAACTCTGCACCCCTGGGGTAATTAAGCAAGAGAAA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 CTGGGCACAGTTTACTGTCAGGCAAGCTTTCCTGGAGCAAATATAATTGGTAATAAAATGTCTGCCATTTCTGT 962
||..|.|||.|||
Sbjct 1 ------------------------------------------------------AACTTCTCTCCCA------- 13
Query 963 TCATGGTGTGAGTACCTCTGGAGGACAGATGTACCACTATGACATGAATACAGCATCCCTTTCTCAACAGCAGG 1036
|||.||| |.|.| ||.|| |.||||
Sbjct 14 -----GTGCGAG-AGCGC-GGCGG-------------------------------------------CGGCAG- 36
Query 1037 ATCAGAAGCCTATTTTTAATGTCATTCCACCAATTCCCGTTGGTTCCGAAAATTGGAATAGGTGCCAAG--GAT 1108
|.|||| .|||| |..|||.|| |||
Sbjct 37 --CTGAAG--------------------------ACCCG---------------------GCCGCCCAGATGAT 61
Query 1109 CTGGAGATGACAACTTGACTTCTCTGGGGACTCTG---------AACTTCCCTGGTCGAACAGTTTTTTCTAAT 1173
..||.|.|| |||||| ||| .|||.|||..|
Sbjct 62 GCGGTGGTG----------------GGGGAC-CTGCCGGCACGCGACTCCCCCCG------------------- 99
Query 1174 GGCTATTCAAGCCCCAGCATGAGACCAGATGTAAGCTCTCCTCCATCCAGCTCCTCAACAGCAACAACAGGACC 1247
||| .|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 100 GGC---CCAAACCCCAGCATGAGACCAGATGTAAGCTCTCCTCCATCCAGCTCCTCAACAGCAACAACAGGACC 170
Query 1248 ACCTCCCAAACTCTGCCTGGTGTGCTCTGATGAAGCTTCAGGATGTCATTATGGAGTCTTAACTTGTGGAAGCT 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 171 ACCTCCCAAACTCTGCCTGGTGTGCTCTGATGAAGCTTCAGGATGTCATTATGGAGTCTTAACTTGTGGAAGCT 244
Query 1322 GTAAAGTTTTCTTCAAAAGAGCAGTGGAAGGACAGCACAATTACCTATGTGCTGGAAGGAATGATTGCATCATC 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 245 GTAAAGTTTTCTTCAAAAGAGCAGTGGAAGGACAGCACAATTACCTATGTGCTGGAAGGAATGATTGCATCATC 318
Query 1396 GATAAAATTCGAAGAAAAAACTGCCCAGCATGCCGCTATCGAAAATGTCTTCAGGCTGGAATGAACCTGGAAGC 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 319 GATAAAATTCGAAGAAAAAACTGCCCAGCATGCCGCTATCGAAAATGTCTTCAGGCTGGAATGAACCTGGAAGC 392
Query 1470 TCGAAAAACAAAGAAAAAAATAAAAGGAATTCAGCAGGCCACTACAGGAGTCTCACAAGAAACCTCTGAAAATC 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 393 TCGAAAAACAAAGAAAAAAATAAAAGGAATTCAGCAGGCCACTACAGGAGTCTCACAAGAAACCTCTGAAAATC 466
Query 1544 CTGGTAACAAAACAATAGTTCCTGCAACGTTACCACAACTCACCCCTACCCTGGTGTCACTGTTGGAGGTTATT 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 467 CTGGTAACAAAACAATAGTTCCTGCAACGTTACCACAACTCACCCCTACCCTGGTGTCACTGTTGGAGGTTATT 540
Query 1618 GAACCTGAAGTGTTATATGCAGGATATGATAGCTCTGTTCCAGACTCAACTTGGAGGATCATGACTACGCTCAA 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GAACCTGAAGTGTTATATGCAGGATATGATAGCTCTGTTCCAGACTCAACTTGGAGGATCATGACTACGCTCAA 614
Query 1692 CATGTTAGGAGGGCGGCAAGTGATTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGTTTCAGGAACTTACACC 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 615 CATGTTAGGAGGGCGGCAAGTGATTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGTTTCAGGAACTTACACC 688
Query 1766 TGGATGACCAAATGACCCTACTGCAGTACTCCTGGATGTTTCTTATGGCATTTGCTCTGGGGTGGAGATCATAT 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 689 TGGATGACCAAATGACCCTACTGCAGTACTCCTGGATGTTTCTTATGGCATTTGCTCTGGGGTGGAGATCATAT 762
Query 1840 AGACAATCAAGTGCAAACCTGCTGTGTTTTGCTCCTGATCTGATTATTAATGAGCAGAGAATGACTCTACCCTG 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 763 AGACAATCAAGTGCAAACCTGCTGTGTTTTGCTCCTGATCTGATTATTAATGAGCAGAGAATGACTCTACCCTG 836
Query 1914 CATGTACGACCAATGTAAACACATGCTGTATGTTTCCTCTGAGTTACACAGGCTTCAGGTATCTTATGAAGAGT 1987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 CATGTACGACCAATGTAAACACATGCTGTATGTTTCCTCTGAGTTACACAGGCTTCAGGTATCTTATGAAGAGT 910
Query 1988 ATCTCTGTATGAAAACCTTACTGCTTCTCTCTTCAGTTCCTAAGGACGGTCTGAAGAGCCAAGAGCTATTTGAT 2061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 911 ATCTCTGTATGAAAACCTTACTGCTTCTCTCTTCAGTTCCTAAGGACGGTCTGAAGAGCCAAGAGCTATTTGAT 984
Query 2062 GAAATTAGAATGACCTACATCAAAGAGCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACTCCAGCCAGAACTG 2135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 985 GAAATTAGAATGACCTACATCAAAGAGCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACTCCAGCCAGAACTG 1058
Query 2136 GCAGCGGTTTTATCAACTGACAAAACTCTTGGATTCTATGCATGAAGTGGTTGAAAATCTCCTTAACTATTGCT 2209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1059 GCAGCGGTTTTATCAACTGACAAAACTCTTGGATTCTATGCATGAAGTGGTTGAAAATCTCCTTAACTATTGCT 1132
Query 2210 TCCAAACATTTTTGGATAAGACCATGAGTATTGAATTCCCCGAGATGTTAGCTGAAATCATCACCAATCAGATA 2283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1133 TCCAAACATTTTTGGATAAGACCATGAGTATTGAATTCCCCGAGATGTTAGCTGAAATCATCACCAATCAGATA 1206
Query 2284 CCAAAATATTCAAATGGAAATATCAAAAAACTTCTGTTTCATCAAAAG-------------------------- 2331
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1207 CCAAAATATTCAAATGGAAATATCAAAAAACTTCTGTTTCATCAAAAGTGACTGCCTTAATAAGAATGGTTGCC 1280
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 1281 TTAAAGAAAGTCGAATTAATAGCTTTTATTGTATAAACTATCAGTTTGTCCTGTAGAGGTTTTGTTGTTTTATT 1354
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 1355 TTTTATTGTTTTCATCTGTTGTTTTGTTTTAAATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAA 1428
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 1429 CAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGGTGAAATTTATTAGTTAATATATCCC 1502
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 1503 AGAAATTAGAAACCTTAATATGTGGACGTAATCTCCACAGTCAAAGAAGGATGGCACCTAAACCACCAGTGCCC 1576
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 1577 AAAGTCTGTGTGATGAACTTTCTCTTCATACTTTTTTTCACAGTTGGCTGGATGAAATTTTCTAGACTTTCTGT 1650
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 1651 TGGTGTATCCCCCCCCTGTATAGTTAGGATAGCATTTTTGATTTATGCATGGAAACCTGAAAAAAAGTTTACAA 1724
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 1725 GTGTATATCAGAAAAGGGAAGTTGTGCCTTTTATAGCTATTACTGTCTGGTTTTAACAATTTCCTTTATATTTA 1798
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 1799 GTGAACTACGCTTGCTCATTTTTTCTTACATAATTTTTTATTCAAGTTATTGTACAGCTGTTTAAGATGGGCAG 1872
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 1873 CTAGTTCGTAGCTTTCCCAAATAAACTCTAAACATTAATCAATCATCTGTGTGAAAATGGGTTGGTGCTTCTAA 1946
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 1947 CCTGATGGCACTTAGCTATCAGAAGACCACAAAAATTGACTCAAATCTCCAGTATTCTTGTCAAAAAAAAAAAA 2020
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2021 AAAAAAGCTCATATTTTGTATATATCTGCTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACT 2094
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2095 GGTATAGAGCACCTAGTCCAGTGACCTGCTGGGTAAACTGTGGATGATGGTTGCAAAAGACTAATTTAAAAAAT 2168
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2169 AACTACCAAGAGGCCCTGTCTGTACCTAACGCCCTATTTTTGCAATGGCTATATGGCAAGAAAGCTGGTAAACT 2242
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2243 ATTTGTCTTTCAGGACCTTTTGAAGTAGTTTGTATAACTTCTTAAAAGTTGTGATTCCAGATAACCAGCTGTAA 2316
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2317 CACAGCTGAGAGACTTTTAATCAGACAAAGTAATTCCTCTCACTAAACTTTACCCAAAAACTAAATCTCTAATA 2390
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2391 TGGCAAAAATGGCTAGACACCCATTTTCACATTCCCATCTGTCACCAATTGGTTAATCTTTCCTGATGGTACAG 2464
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2465 GAAAGCTCAGCTACTGATTTTTGTGATTTAGAACTGTATGTCAGACATCCATGTTTGTAAAACTACACATCCCT 2538
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2539 AATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGTTGAAAATTATTTTAAACAAAATAGAA 2612
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2613 GCTGTAGTAGCCCTTTCTGTGTGCACCTTACCAACTTTCTGTAAACTCAAAACTTAACATATTTACTAAGCCAC 2686
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2687 AAGAAATTTGATTTCTATTCAAGGTGGCCAAATTATTTGTGTAATAGAAAACTGAAAATCTAATATTAAAAATA 2760
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2761 TGGAACTTCTAATATATTTTTATATTTAGTTATAGTTTCAGATATATATCATATTGGTATTCACTAATCTGGGA 2834
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2835 AGGGAAGGGCTACTGCAGCTTTACATGCAATTTATTAAAATGATTGTAAAATAGCTTGTATAGTGTAAAATAAG 2908
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2909 AATGATTTTTAGATGAGATTGTTTTATCATGACATGTTATATATTTTTTGTAGGGGTCAAAGAAATGCTGATGG 2982
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 2983 ATAACCTATATGATTTATAGTTTGTACATGCATTCATACAGGCAGCGATGGTCTCAGAAACCAAACAGTTTGCT 3056
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3057 CTAGGGGAAGAGGGAGATGGAGACTGGTCCTGTGTGCAGTGAAGGTTGCTGAGGCTCTGACCCAGTGAGATTAC 3130
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3131 AGAGGAAGTTATCCTCTGCCTCCCATTCTGACCACCCTTCTCATTCCAACAGTGAGTCTGTCAGCGCAGGTTTA 3204
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3205 GTTTACTCAATCTCCCCTTGCACTAAAGTATGTAAAGTATGTAAACAGGAGACAGGAAGGTGGTGCTTACATCC 3278
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3279 TTAAAGGCACCATCTAATAGCGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT 3352
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3353 CAGAAGTTTGGCAATAGTTTGCATAGAGGTACCAGCAATATGTAAATAGTGCAGAATCTCATAGGTTGCCAATA 3426
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3427 ATACACTAATTCCTTTCTATCCTACAACAAGAGTTTATTTCCAAATAAAATGAGGACATGTTTTTGTTTTCTTT 3500
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3501 GAATGCTTTTTGAATGTTATTTGTTATTTTCAGTATTTTGGAGAAATTATTTAATAAAAAAACAATCATTTGCT 3574
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3575 TTTTGAATGCTCTCTAAAAGGGAATGTAATATTTTAAGATGGTGTGTAACCCGGCTGGATAAATTTTTGGTGCC 3648
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3649 TAAGAAAACTGCTTGAATATTCTTATCAATGACAGTGTTAAGTTTCAAAAAGAGCTTCTAAAACGTAGATTATC 3722
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3723 ATTCCTTTATAGAATGTTATGTGGTTAAAACCAGAAAGCACATCTCACACATTAATCTGATTTTCATCCCAACA 3796
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3797 ATCTTGGCGCTCAAAAAATAGAACTCAATGAGAAAAAGAAGATTATGTGCACTTCGTTGTCAATAATAAGTCAA 3870
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3871 CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGCCCTTTTAGGATACGTGG 3944
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 3945 GGGAAAAGAAAGTCATCTTAATTATGTTTAATTGTGGATTTAAGTGCTATATGGTGGTGCTGTTTGAAAGCAGA 4018
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4019 TTTATTTCCTATGTATGTGTTATCTGGCCATCCCAACCCAAACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGT 4092
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4093 TGGTTACTCACAACAAATCCTGAAAAGTATTTTTAGTGTTTGTAGGTATTCTGTGGGATACTATACAAGCAGAA 4166
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4167 CTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCCTAAAACTATGGGAGGAAACCTTGGC 4240
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4241 CACCCCAAAAGGAAAACTAACATGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCA 4314
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4315 TGCCATGAAGGAAAGCCACGCTCCCTTCAGAATTCAGAGGCAGGGAGCAATTCCAGTTTCACCTAAGTCTCATA 4388
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4389 ATTTTAGTTCCCTTTTAAAAACCCTGAAAACTACATCACCATGGAATGAAAAATATTGTTATACAATACATTGA 4462
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4463 TCTGTCAAACTTCCAGAACCATGGTAGCCTTCAGTGAGATTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCT 4536
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4537 GTAGGTGAATGTGTTTTTGTGTGTGTGTGTCTGGTTTTAGTGTCAGAAGGGAAATAAAAGTGTAAGGAGGACAC 4610
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4611 TTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGGATTAGTGA 4684
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4685 CCAGGTTTTCAGGAAAGGATTTGCTTCTCTCTAGAAAATGTCTGAAAGGATTTTATTTTCTGATGAAAGGCTGT 4758
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4759 ATGAAAATACCCTCCTCAAATAACTTGCTTAACTACATATAGATTCAAGTGTGTCAATATTCTATTTTGTATAT 4832
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4833 TAAATGCTATATAATGGGGACAAATCTATATTATACTGTGTATGGCATTATTAAGAAGCTTTTTCATTATTTTT 4906
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4907 TATCACAGTAATTTTAAAATGTGTAAAAATTAAAACCAGTGACTCCTGTTTAAAAATAAAAGTTGTAGTTTTTT 4980
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 4981 ATTCATGCTGAATAATAATCTGTAGTTAAAAAAAAAGTGTCTTTTTACCTACGCAGTGAAATGTCAGACTGTAA 5054
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 5055 AACCTTGTGTGGAAATGTTTAACTTTTATTTTTTCATTTAAATTTGCTGTTCTGGTATTACCAAACCACACATT 5128
Query 2332 -------------------------------------------------------------------------- 2331
Sbjct 5129 TGTACCGAATTGGCAGTAAATGTTAGCCATTTACAGCAATGCCAAATATGGAGAAACATCATAATAAAAAAATC 5202
Query 2332 ---------- 2331
Sbjct 5203 TGCTTTTTCA 5212
