Nucleotide Global Alignment
Description
- Query:
- TRCN0000469904
- Subject:
- XR_380422.3
- Aligned Length:
- 2156
- Identities:
- 797
- Gaps:
- 1266
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGGTTGCACGGAGGGGGCGGGTCCTCGCCGCGCGCAGTGCTTCGGCCAGAGCTCGAGGCGCTGCTTACCGTCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGAGCTAGGAGACGCCGCGGCCGCCGCTGGGTCGCATCGGGCTTCGCGTCGCGCCGTGTACGCCTCCTCTGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCACCCGACCGGCAGCATAGGCTCTACCTGGTCCGCGGCCTCCCTGTCCGCGGCGGGGCAGGTGGTTTTCCTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTGAACTCCTGCCCTGCCTTCCGGTAGCTGGCTCGTGGCTCCCAACTCTGAGCTCTCGGTGAACCTGGGAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGATGAGAACAGGGTAGGTGAGCTCCAGCCAAGCCAGCCCTGCCAGAGACCTTCAGTTTCGGTGGCTGGTGCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGAGCCACAGTGCGCTTCAGCATTTGGATCTATGGGCCTGCTTTGAACCATAGAGCCTGCCTATGGGGGAAGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACGCCATCTGGGCCCCACCCATCCTTCCTCACAGCACCCTCGGCACCTTAAGCCACCACCCTGAGCTACATTT 518
Query 1 ----------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATG 64
|||||.||.||||||||.||||||||||||||.||.|||||.|||||||||||.||||||||||
Sbjct 519 TGGAGGGAAGATGGAATCTAAGGTCTCGGAAGGTGGCCTGAACGTAACCCTGACCATCCGCCTACTGATGCATG 592
Query 65 GAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGG 138
||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.||.|||
Sbjct 593 GAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACAGTAAAGAAGATGCGTGAAGAGAGTGGCGCCAGG 666
Query 139 ATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGC 212
||||||||||||||||||||||||||||||||.||.||.||.|||||||||||.||.|||||||||||||||||
Sbjct 667 ATCAACATCTCAGAGGGAAACTGCCCAGAGAGAATCGTTACAATCACAGGCCCAACTGACGCCATCTTCAAGGC 740
Query 213 CTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGC 286
||||||.||||||||.|||||||||||||||||.|||||.||.|||||||||||||||||||||||||||||||
Sbjct 741 CTTTGCTATGATCGCGTACAAGTTTGAGGAGGACATCATTAATTCCATGAGCAACAGCCCTGCCACCAGCAAGC 814
Query 287 CCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATC 360
|.||||||||.|||.|.||.|||||.||||||||||||||.||||||||||||||||||||.||||||||||||
Sbjct 815 CTCCAGTGACACTGCGACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGATC 888
Query 361 AAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGC 434
|||||||||.||||||||||||||||.|||||.||||||||.||.||||||||||||||||||||.|||||.||
Sbjct 889 AAGGAGATCCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGGTGACATGCTGCCCAACTCCACAGAGCGGGC 962
Query 435 GGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGGCCT 508
.|||||.|||||.|||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||.||
Sbjct 963 AGTGACTATCTCAGGGACCCCAGACGCCATCATCCAGTGTGTGAAACAGATCTGTGTGGTCATGCTGGAGTCC- 1035
Query 509 ACACAATCCAGGGACAGTATGCCA----TCCCTCACCCGGATTTGACCAA------GCTCCAC----------- 561
|||..||.|| .||||| ||||| ||| |.|||| .||||||
Sbjct 1036 -------CCACCGAAAG-GTGCCACCATTCCCT-ACC-------GCCCAAAGCCCGCCTCCACCCCTGTCATTT 1093
Query 562 ---CAGTTGGCCATG---CAGCAAACCCCCT---TTCCTCCCCTCGGACAGACCAACCCC--GCTTTCCCCGGA 624
|||.|||.||.| .|||..||||.|| ..|||||.|| .||||||.| .||||..|.|.|
Sbjct 1094 TTGCAGGTGGTCAGGTAAGAGCCGACCCGCTCGCGGCCTCCACT-------GCCAACCTCAGCCTTTTACTGCA 1160
Query 625 GAA----AAGCTGCCTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGT----CATC---------- 680
|.| ..|||||| |.||| .||.|||| ..|||.|||| ||||
Sbjct 1161 GCATCCGCCGCTGCC------CGCCT----------ACACAATC--CAGGGACAGTACGCCATCCCCCACCCAG 1216
Query 681 AGGTCTGGACGCCAGCCCACCGGCCAGCACTCATGAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTG 754
|.|||||||.||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1217 ATGTCTGGATGCCAGCCCACCGGCCAGCACTCATGAGCTCACCATTCCCAATGAT-------GCTGCATAATTG 1283
Query 755 GACGCCAAGGGACCAAAATCAATGAAATTCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAA 828
||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||.|||
Sbjct 1284 GACGCCAAGGCACCAAAATCAATGAAATCCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAATGCCACTGAA 1357
Query 829 GGGTCCTCAGAGCGTCAGATCACCATCACGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGC 902
|||||.||||||||.|||||.||||||||.||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1358 GGGTCGTCAGAGCGCCAGATTACCATCACAGGGACCCCAGCCAACATCAGCCTTGCCCAGTATCTCATCAACGC 1431
Query 903 CAGGCTGACGTCCGAGGTCACCGGGATGG--GCACGCTG----------------------------------- 939
.|||||||||||.|||||||||||||||| ||||.||.
Sbjct 1432 TAGGCTGACGTCTGAGGTCACCGGGATGGGTGCACTCTAACCTACCCAAGGTCCTCCACTGCACACATCGGATG 1505
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1506 GCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCG 1579
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1580 TTTTCTTTACAAACAGATGATAGTGCGTGTCTGCCCACTCAGGCCCTGTGCGCTCCGTGTTAGTGTAGCCCTCC 1653
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1654 ACGCATTGGCATGCAGCTCTTTACTTTACTGCTCAACGTATTCCCAAATGTGATGTTTCAGAGATTTATTCCTC 1727
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1728 AGTATCCATGTGACTGTCTGTTTAAAAGTTGGTTTGATGCTTTAACAGCACTTCCTATGTCCTGCTGTCCCTTG 1801
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1802 TTCTCAGAGACCCTCCTCTCTCACCCAGTCTACTGACTCATTTCCGCCCTAGGTTGTATGCAGGGATCAGAGGT 1875
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1876 ACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGGTAGAGT 1949
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1950 GCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCT 2023
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2024 TCCAAGATGGCTAAGAACAAGGACTTGCCAGAAAGTTCATCTGCACCCATCAGAGTTTAATAAATGTCGTGTTC 2097
Query 940 ---------- 939
Sbjct 2098 CTCCCCCATG 2107
