Nucleotide Global Alignment
Description
- Query:
- TRCN0000469904
- Subject:
- XR_380423.3
- Aligned Length:
- 2155
- Identities:
- 803
- Gaps:
- 1258
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTTGCACGGAGGGGGCGGGTCCTCGCCGCGCGCAGTGCTTCGGCCAGAGCTCGAGGCGCTGCTTACCGTCGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGCTAGGAGACGCCGCGGCCGCCGCTGGGTCGCATCGGGCTTCGCGTCGCGCCGTGTACGCCTCCTCTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACCCGACCGGCAGCATAGGCTCTACCTGGTCCGCGGCCTCCCTGTCCGCGGCGGGGCAGGTGGTTTTCCTGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGAACTCCTGCCCTGCCTTCCGGTAGCTGGCTCGTGGCTCCCAACTCTGAGCTCTCGGTGAACCTGGGAAGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATGAGAACAGGGTAGGTGAGCTCCAGCCAAGCCAGCCCTGCCAGAGACCTTCAGTTTCGGTGGCTGGTGCTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGCCACAGTGCGCTTCAGCATTTGGATCTATGGGCCTGCTTTGAACCATAGAGCCTGCCTATGGGGGAAGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACGCCATCTGGGCCCCACCCATCCTTCCTCACAGCACCCTCGGCACCTTAAGCCACCACCCTGAGCTACATTTT 518
Query 1 ---------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGG 65
|||||.||.||||||||.||||||||||||||.||.|||||.|||||||||||.|||||||||||
Sbjct 519 GGAGGGAAGATGGAATCTAAGGTCTCGGAAGGTGGCCTGAACGTAACCCTGACCATCCGCCTACTGATGCATGG 592
Query 66 AAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGA 139
|||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.||.||||
Sbjct 593 AAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACAGTAAAGAAGATGCGTGAAGAGAGTGGCGCCAGGA 666
Query 140 TCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCC 213
|||||||||||||||||||||||||||||||.||.||.||.|||||||||||.||.||||||||||||||||||
Sbjct 667 TCAACATCTCAGAGGGAAACTGCCCAGAGAGAATCGTTACAATCACAGGCCCAACTGACGCCATCTTCAAGGCC 740
Query 214 TTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCC 287
|||||.||||||||.|||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||
Sbjct 741 TTTGCTATGATCGCGTACAAGTTTGAGGAGGACATCATTAATTCCATGAGCAACAGCCCTGCCACCAGCAAGCC 814
Query 288 CCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCA 361
.||||||||.|||.|.||.|||||.||||||||||||||.||||||||||||||||||||.|||||||||||||
Sbjct 815 TCCAGTGACACTGCGACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGATCA 888
Query 362 AGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCG 435
||||||||.||||||||||||||||.|||||.||||||||.||.||||||||||||||||||||.|||||.||.
Sbjct 889 AGGAGATCCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGGTGACATGCTGCCCAACTCCACAGAGCGGGCA 962
Query 436 GTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGGCCTA 509
|||||.|||||.|||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||.||
Sbjct 963 GTGACTATCTCAGGGACCCCAGACGCCATCATCCAGTGTGTGAAACAGATCTGTGTGGTCATGCTGGAGTCC-- 1034
Query 510 CACAATCCAGGGACAGTATGCCA----TCCCTCACCCGGATTTGACCAA------GCTCCAC------------ 561
|||..||.|| .||||| ||||| ||| |.|||| .||||||
Sbjct 1035 ------CCACCGAAAG-GTGCCACCATTCCCT-ACC-------GCCCAAAGCCCGCCTCCACCCCTGTCATTTT 1093
Query 562 --CAGTTGGCCATG---CAGCAAACCCCCT---TTCCTCCCCTCGGACAGACCAACCCC--GCTTTCCCCGGAG 625
|||.|||.||.| .|||..||||.|| ..|||||.|| .||||||.| .||||..|.|.||
Sbjct 1094 TGCAGGTGGTCAGGTAAGAGCCGACCCGCTCGCGGCCTCCACT-------GCCAACCTCAGCCTTTTACTGCAG 1160
Query 626 AA----AAGCTGCCTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGT----CATC----------A 681
.| ..|||||| |.||| .||.|||| ..|||.|||| |||| |
Sbjct 1161 CATCCGCCGCTGCC------CGCCT----------ACACAATC--CAGGGACAGTACGCCATCCCCCACCCAGA 1216
Query 682 GGTCTGGACGCCAGCCCACCGGCCAGCACTCATGAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGG 755
.|||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1217 TGTCTGGATGCCAGCCCACCGGCCAGCACTCATGAGCTCACCATTCCCAATGATCTTATAGGCTGCATAATTGG 1290
Query 756 ACGCCAAGGGACCAAAATCAATGAAATTCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAG 829
|||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||.||||
Sbjct 1291 ACGCCAAGGCACCAAAATCAATGAAATCCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAATGCCACTGAAG 1364
Query 830 GGTCCTCAGAGCGTCAGATCACCATCACGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCC 903
||||.||||||||.|||||.||||||||.||||||||.|||||||||||||||||||||||||||||||||||.
Sbjct 1365 GGTCGTCAGAGCGCCAGATTACCATCACAGGGACCCCAGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCT 1438
Query 904 AGGCTGACGTCCGAGGTCACCGGGATGG--GCACGCTG------------------------------------ 939
|||||||||||.|||||||||||||||| ||||.||.
Sbjct 1439 AGGCTGACGTCTGAGGTCACCGGGATGGGTGCACTCTAACCTACCCAAGGTCCTCCACTGCACACATCGGATGG 1512
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1513 CTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGT 1586
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1587 TTTCTTTACAAACAGATGATAGTGCGTGTCTGCCCACTCAGGCCCTGTGCGCTCCGTGTTAGTGTAGCCCTCCA 1660
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1661 CGCATTGGCATGCAGCTCTTTACTTTACTGCTCAACGTATTCCCAAATGTGATGTTTCAGAGATTTATTCCTCA 1734
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1735 GTATCCATGTGACTGTCTGTTTAAAAGTTGGTTTGATGCTTTAACAGCACTTCCTATGTCCTGCTGTCCCTTGT 1808
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1809 TCTCAGAGACCCTCCTCTCTCACCCAGTCTACTGACTCATTTCCGCCCTAGGTTGTATGCAGGGATCAGAGGTA 1882
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1883 CTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGGTAGAGTG 1956
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1957 CCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTT 2030
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2031 CCAAGATGGCTAAGAACAAGGACTTGCCAGAAAGTTCATCTGCACCCATCAGAGTTTAATAAATGTCGTGTTCC 2104
Query 940 --------- 939
Sbjct 2105 TCCCCCATG 2113
