Nucleotide Global Alignment
Description
- Query:
- TRCN0000469904
- Subject:
- XR_380425.3
- Aligned Length:
- 2122
- Identities:
- 775
- Gaps:
- 1262
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGCACGGAGGGGGCGGGTCCTCGCCGCGCGCAGTGCTTCGGCCAGAGCTCGAGGCGCTGCTTACCGTCGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGCTAGGAGACGCCGCGGCCGCCGCTGGGTCGCATCGGGCTTCGCGTCGCGCCGTGTACGCCTCCTCTGCCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCCGACCGGCAGCATAGGCTCTACCTGGTCCGCGGCCTCCCTGTCCGCGGCGGGGCAGGTGGTTTTCCTGCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAACTCCTGCCCTGCCTTCCGGTAGCTGGCTCGTGGCTCCCAACTCTGAGCTCTCGGTGAACCTGGGAAGGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATGAGAACAGGGTAGGTGAGCTCCAGCCAAGCCAGCCCTGCCAGAGACCTTCAGTTTCGGTGGCTGGTGCTCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCCACAGTGCGCTTCAGCATTTGGATCTATGGGCCTGCTTTGAACCATAGAGCCTGCCTATGGGGGAAGGTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCCATCTGGGCCCCACCCATCCTTCCTCACAGCACCCTCGGCACCTTAAGCCACCACCCTGAGCTACATTTTG 518
Query 1 --------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGGA 66
|||||.||.||||||||.||||||||||||||.||.|||||.|||||||||||.||||||||||||
Sbjct 519 GAGGGAAGATGGAATCTAAGGTCTCGGAAGGTGGCCTGAACGTAACCCTGACCATCCGCCTACTGATGCATGGA 592
Query 67 AAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGAT 140
||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.||.|||||
Sbjct 593 AAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACAGTAAAGAAGATGCGTGAAGAGAGTGGCGCCAGGAT 666
Query 141 CAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCCT 214
||||||||||||||||||||||||||||||.||.||.||.|||||||||||.||.|||||||||||||||||||
Sbjct 667 CAACATCTCAGAGGGAAACTGCCCAGAGAGAATCGTTACAATCACAGGCCCAACTGACGCCATCTTCAAGGCCT 740
Query 215 TTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCCC 288
||||.||||||||.|||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||.
Sbjct 741 TTGCTATGATCGCGTACAAGTTTGAGGAGGACATCATTAATTCCATGAGCAACAGCCCTGCCACCAGCAAGCCT 814
Query 289 CCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCAA 362
||||||||.|||.|.||.|||||.||||||||||||||.||||||||||||||||||||.||||||||||||||
Sbjct 815 CCAGTGACACTGCGACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGATCAA 888
Query 363 GGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCGG 436
|||||||.||||||||||||||||.|||||.||||||||.||.||||||||||||||||||||.|||||.||.|
Sbjct 889 GGAGATCCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGGTGACATGCTGCCCAACTCCACAGAGCGGGCAG 962
Query 437 TGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGGCCTAC 510
||||.|||||.|||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||.||
Sbjct 963 TGACTATCTCAGGGACCCCAGACGCCATCATCCAGTGTGTGAAACAGATCTGTGTGGTCATGCTGGAGTCC--- 1033
Query 511 ACAATCCAGGGACAGTATGCCA----TCCCTCACCCGGATTTGACCAAGCTCCACCAGTTGGCCATGCAGCAAA 580
|||..||.|| .||||| ||||| ||| ||| ||||
Sbjct 1034 -----CCACCGAAAG-GTGCCACCATTCCCT-ACC--------------------------GCC------CAAA 1068
Query 581 CCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGCTGCCTTTACACTCCTCCGAAGAA 654
.|||...|||.||||| |.|| .|||..|.||.|...|| ||||..|||.|||
Sbjct 1069 GCCCGCCTCCACCCCT--GTCA-----------TTTTTGCAGGTGGTCAG--GCCTACACAATCC--------- 1118
Query 655 GCTCAAAATCTGATGGGCCAGT----CATC----------AGGTCTGGACGCCAGCCCACCGGCCAGCACTCAT 714
.|||.|||| |||| |.|||||||.||||||||||||||||||||||||
Sbjct 1119 -------------AGGGACAGTACGCCATCCCCCACCCAGATGTCTGGATGCCAGCCCACCGGCCAGCACTCAT 1179
Query 715 GAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAATTCGACA 788
|||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||.|||||
Sbjct 1180 GAGCTCACCATTCCCAATGATCTTATAGGCTGCATAATTGGACGCCAAGGCACCAAAATCAATGAAATCCGACA 1253
Query 789 GATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCACGGGGA 862
||||||||||||||||||||||||||||||.|||||.||||||||.||||||||.|||||.||||||||.||||
Sbjct 1254 GATGTCTGGAGCTCAGATCAAAATCGCCAATGCCACTGAAGGGTCGTCAGAGCGCCAGATTACCATCACAGGGA 1327
Query 863 CCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATGG--GCA 934
||||.|||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||| |||
Sbjct 1328 CCCCAGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCTAGGCTGACGTCTGAGGTCACCGGGATGGGTGCA 1401
Query 935 CGCTG--------------------------------------------------------------------- 939
|.||.
Sbjct 1402 CTCTAACCTACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTG 1475
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1476 TACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTTTACAAACAGATGATAGTGCGTGTCTGC 1549
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1550 CCACTCAGGCCCTGTGCGCTCCGTGTTAGTGTAGCCCTCCACGCATTGGCATGCAGCTCTTTACTTTACTGCTC 1623
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1624 AACGTATTCCCAAATGTGATGTTTCAGAGATTTATTCCTCAGTATCCATGTGACTGTCTGTTTAAAAGTTGGTT 1697
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1698 TGATGCTTTAACAGCACTTCCTATGTCCTGCTGTCCCTTGTTCTCAGAGACCCTCCTCTCTCACCCAGTCTACT 1771
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1772 GACTCATTTCCGCCCTAGGTTGTATGCAGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAG 1845
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1846 AGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGGTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGG 1919
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1920 GATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCTAAGAACAAGGACTTGCCAGAAA 1993
Query 940 -------------------------------------------------- 939
Sbjct 1994 GTTCATCTGCACCCATCAGAGTTTAATAAATGTCGTGTTCCTCCCCCATG 2043
