Nucleotide Global Alignment
Description
- Query:
- TRCN0000469904
- Subject:
- XR_871719.2
- Aligned Length:
- 2253
- Identities:
- 869
- Gaps:
- 1321
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGGTTGCACGGAGGGGGCGGGTCCTCGCCGCGCGCAGTGCTTCGGCCAGAGCTCGAGGCGCTGCTTACCGTCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGAGCTAGGAGACGCCGCGGCCGCCGCTGGGTCGCATCGGGCTTCGCGTCGCGCCGTGTACGCCTCCTCTGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCACCCGACCGGCAGCATAGGCTCTACCTGGTCCGCGGCCTCCCTGTCCGCGGCGGGGCAGGTGGTTTTCCTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTGAACTCCTGCCCTGCCTTCCGGTAGCTGGCTCGTGGCTCCCAACTCTGAGCTCTCGGTGAACCTGGGAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGATGAGAACAGGGTAGGTGAGCTCCAGCCAAGCCAGCCCTGCCAGAGACCTTCAGTTTCGGTGGCTGGTGCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGAGCCACAGTGCGCTTCAGCATTTGGATCTATGGGCCTGCTTTGAACCATAGAGCCTGCCTATGGGGGAAGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACGCCATCTGGGCCCCACCCATCCTTCCTCACAGCACCCTCGGCACCTTAAGCCACCACCCTGAGCTACATTT 518
Query 1 ----------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATG 64
|||||.||.||||||||.||||||||||||||.||.|||||.|||||||||||.||||||||||
Sbjct 519 TGGAGGGAAGATGGAATCTAAGGTCTCGGAAGGTGGCCTGAACGTAACCCTGACCATCCGCCTACTGATGCATG 592
Query 65 GAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGG 138
||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.||.|||
Sbjct 593 GAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACAGTAAAGAAGATGCGTGAAGAGAGTGGCGCCAGG 666
Query 139 ATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGC 212
||||||||||||||||||||||||||||||||.||.||.||.|||||||||||.||.|||||||||||||||||
Sbjct 667 ATCAACATCTCAGAGGGAAACTGCCCAGAGAGAATCGTTACAATCACAGGCCCAACTGACGCCATCTTCAAGGC 740
Query 213 CTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGC 286
||||||.||||||||.|||||||||||||||||.|||||.||.|||||||||||||||||||||||||||||||
Sbjct 741 CTTTGCTATGATCGCGTACAAGTTTGAGGAGGACATCATTAATTCCATGAGCAACAGCCCTGCCACCAGCAAGC 814
Query 287 CCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATC 360
|.||||||||.|||.|.||.|||||.||||||||||||||.||||||||||||||||||||.||||||||||||
Sbjct 815 CTCCAGTGACACTGCGACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGATC 888
Query 361 AAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGC 434
|||||||||.||||||||||||||||.|||||.||||||||.||.||||||||||||||||||||.|||||.||
Sbjct 889 AAGGAGATCCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGGTGACATGCTGCCCAACTCCACAGAGCGGGC 962
Query 435 GGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAG---- 504
.|||||.|||||.|||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||
Sbjct 963 AGTGACTATCTCAGGGACCCCAGACGCCATCATCCAGTGTGTGAAACAGATCTGTGTGGTCATGCTGGAGTCCC 1036
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1037 CACCGAAAGGTGCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCCCTGTCATTTTTGCAGGTGGTCAGGTA 1110
Query 505 ------------------------------------------------------------------GCCTACAC 512
||||||||
Sbjct 1111 AGAGCCGACCCGCTCGCGGCCTCCACTGCCAACCTCAGCCTTTTACTGCAGCATCCGCCGCTGCCCGCCTACAC 1184
Query 513 AATCCAGGGACAGTATGCCATCCCTCACCCGGAT---TTGACCAAGCTCCACCAGTTGGCCATGCAGCAAACCC 583
|||||||||||||||.||||||||.|||||.||| |||||||||||||||||||||||||||||||||||||
Sbjct 1185 AATCCAGGGACAGTACGCCATCCCCCACCCAGATCAGTTGACCAAGCTCCACCAGTTGGCCATGCAGCAAACCC 1258
Query 584 CCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGCTGCCTTTACACTCCTCCGAAGAAGCT 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGCTGCCTTTACACTCCTCCGAAGAAGCT 1332
Query 658 CAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGCCAGCACTCATGAGCTCACCATTCCCAA 731
||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAAAATCTGATGGGCCAGTCGTCAGGTCTGGATGCCAGCCCACCGGCCAGCACTCATGAGCTCACCATTCCCAA 1406
Query 732 TGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAATTCGACAGATGTCTGGAGCTCAGA 805
|||| ||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||
Sbjct 1407 TGAT-------GCTGCATAATTGGACGCCAAGGCACCAAAATCAATGAAATCCGACAGATGTCTGGAGCTCAGA 1473
Query 806 TCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCACGGGGACCCCGGCCAACATCAGC 879
|||||||||||||.|||||.||||||||.||||||||.|||||.||||||||.||||||||.||||||||||||
Sbjct 1474 TCAAAATCGCCAATGCCACTGAAGGGTCGTCAGAGCGCCAGATTACCATCACAGGGACCCCAGCCAACATCAGC 1547
Query 880 CTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATGG--GCACGCTG------------ 939
|||||||||||||||||||||||.|||||||||||.|||||||||||||||| ||||.||.
Sbjct 1548 CTTGCCCAGTATCTCATCAACGCTAGGCTGACGTCTGAGGTCACCGGGATGGGTGCACTCTAACCTACCCAAGG 1621
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1622 TCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCT 1695
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1696 TCCTTGCAGATATGAATAGAGCGTTTTCTTTACAAACAGATGATAGTGCGTGTCTGCCCACTCAGGCCCTGTGC 1769
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1770 GCTCCGTGTTAGTGTAGCCCTCCACGCATTGGCATGCAGCTCTTTACTTTACTGCTCAACGTATTCCCAAATGT 1843
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1844 GATGTTTCAGAGATTTATTCCTCAGTATCCATGTGACTGTCTGTTTAAAAGTTGGTTTGATGCTTTAACAGCAC 1917
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1918 TTCCTATGTCCTGCTGTCCCTTGTTCTCAGAGACCCTCCTCTCTCACCCAGTCTACTGACTCATTTCCGCCCTA 1991
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1992 GGTTGTATGCAGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAGGGACTTGGGGGT 2065
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2066 GTATCTAAGGAGCAGGGTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTCGGGGAGGGG 2139
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2140 GCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCTAAGAACAAGGACTTGCCAGAAAGTTCATCTGCACCCATC 2213
Query 940 --------------------------------- 939
Sbjct 2214 AGAGTTTAATAAATGTCGTGTTCCTCCCCCATG 2246
