Nucleotide Global Alignment

Description

Query:
TRCN0000470267
Subject:
XM_011244177.2
Aligned Length:
1066
Identities:
576
Gaps:
398

Alignment

Query    1  ATGATGGAGAAGTATGAAAAAATTGGGAAAATTGGAGAAGGATCCTATGGAGTTGTTTTCAAATGTAGAAACAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGACACGGGTCAGATTGTGGCCATCAAGAAGTTTCNGGAATCAGAAGATGACCCTGTCATAAANNAAANTNNCC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTCGGGAAATCCGAAT---GCTC----AAGCAACTCAAGCATCCCAACCTTGTTAACCTNCTGGAAGTCTTCAG  215
                          ||   ||||    .|||||||||||||.||||||||.||.|||||.||||||||||||.|
Sbjct    1  --------------ATGAGGCTCGAGAGAGCAACTCAAGCACCCCAACCTGGTCAACCTCCTGGAAGTCTTCCG  60

Query  216  GAGGAAACGGAGGCTTCACCTGGTGTTTGAATATTGTGACCACACAGTTCTCCATGAGTTGGACAGATACCAAA  289
            ||||||.||||||||||||||||||||.||.||.||.||||||||.||.||.||.|||.||||..|.||.|  |
Sbjct   61  GAGGAAGCGGAGGCTTCACCTGGTGTTCGAGTACTGCGACCACACGGTGCTTCACGAGCTGGATCGGTATC--A  132

Query  290  GAGGGGTACCAGAACATCTCGTGAAGAGCATAACTTGGCAGACACTGCAAGCTGTAAATTTTTGCCATAAACAC  363
            ||||||                                                                    
Sbjct  133  GAGGGG--------------------------------------------------------------------  138

Query  364  AATTGCATACATAGAGACGTGAAGCCAGAAAATATCCTCATCACGAAACATTCCGTGATTAAGCTTTGTGACTT  437
               ||||||||.||||||||||||||.||||||||.||||||||.|||||.||.|..||||||||.||||||||
Sbjct  139  ---TGCATACACAGAGACGTGAAGCCGGAAAATATTCTCATCACCAAACAGTCAGCCATTAAGCTCTGTGACTT  209

Query  438  TGGATTTGCTCGGCTTTTGACTGGACCGAGTGACTACTATACAGACTACGTGGCTACCAGGTGGTACCGCTCCC  511
            |||.||.||.||||||.|.||||||||..||||||||||.||.|||||||||||.|||.|||||||||||||.|
Sbjct  210  TGGGTTCGCACGGCTTCTCACTGGACCAGGTGACTACTACACGGACTACGTGGCCACCCGGTGGTACCGCTCAC  283

Query  512  CTGAGCTGCTGGTGGGGGACACGCAGTACGGCCCCCCGGTGGATGTTTGGGCAATTGGCTGTGTCTTTGCTGAG  585
            |.||||||||.|||||.|||||||||||.||.|||||.||.|||||.|||||||||||||||||.|||||||||
Sbjct  284  CCGAGCTGCTAGTGGGAGACACGCAGTATGGTCCCCCTGTAGATGTCTGGGCAATTGGCTGTGTGTTTGCTGAG  357

Query  586  CTGCTGTCAGGAGTGCCTCTGTGGCCAGGAAAATCGGATGTGGATCAGCTGTATCTGATTAGGAAGACCTTGGG  659
            .|.|||||.|||||||||||.||||||||||||||.||.|||||||||||.||.|||||.|||||.|||.||||
Sbjct  358  TTACTGTCCGGAGTGCCTCTATGGCCAGGAAAATCTGACGTGGATCAGCTCTACCTGATAAGGAAAACCCTGGG  431

Query  660  GGATCTCATTCCTAGGCACCAGCAAGTGTTTAGCACGAATCAGTACTTCAGTGGAGTGAAAATTCCAGACCCTG  733
            |||.||||||||.||||||||||||||.|||||||.||||||.|||||||||||.|||||||||||||||||||
Sbjct  432  GGACCTCATTCCCAGGCACCAGCAAGTATTTAGCATGAATCAATACTTCAGTGGGGTGAAAATTCCAGACCCTG  505

Query  734  AAGATATGGAACCACTTGAATTAAAATTCCCAAACATCTCTTATCCTGCCCTGGGGCTCCTAAA----------  797
            ||||.||||||.|||||||.||.|||||.|||||||||||.||..||||.|||||..||.||||          
Sbjct  506  AAGACATGGAAACACTTGAGTTGAAATTTCCAAACATCTCCTACTCTGCACTGGGCTTCTTAAAGGGCTGCCTC  579

Query  798  --------------------------------------------------------------------------  797
                                                                                      
Sbjct  580  CACATGGATCCTGCTGAGAGGCTGACATGCGAACAGCTGTTGCAGCATCCATATTTTGACAGCATTCGAGAAGT  653

Query  798  ------------------------------------------------------------------------GT  799
                                                                                    |.
Sbjct  654  TGGGGAGTTGACGAGACAACATGACAAACCAGCGAGGAAGACTCTGAGGCAGAGTAGAAAGCACTTGACTGGGC  727

Query  800  TGCAGTACCTACCCCAGCTAACTGGCAGCAGCATCCTTCCAGCTTTGGATAATAAGAAGTACTACTGTGATACC  873
            |||||||||||||.||||||||..|||||.|||||||||||||||||||.||||||||||||.|||||..||||
Sbjct  728  TGCAGTACCTACCTCAGCTAACCAGCAGCCGCATCCTTCCAGCTTTGGACAATAAGAAGTACCACTGTAGTACC  801

Query  874  AAGAAACTTAACTACCGTTTTCCAAACATT  903
            ||||.|.|||||||||.|||||||||.|||
Sbjct  802  AAGAGATTTAACTACCATTTTCCAAATATT  831