Nucleotide Global Alignment

Description

• Query: TRCN0000470392
• Subject: XM_006521460.3
• Aligned Length: 1123
• Identities: 819
• Gaps: 215

Alignment

Query    1  ---------------------ATGAGGATGGAGGCCGGTGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGC  53
                                 |||||||||||||||||.|||||||||||.||||.||||||||||||||||.|
Sbjct    1  ATGCAGACAACGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCACCGGTGGGGGCGGGCGGCCGCCC  74

Query   54  CGCAGGCGGCTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT  127
            ||..||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||
Sbjct   75  CGGGGGCGGCTGGGGCAAGTGGGTGCGGCTGAACGTGGGGGGCACGGTGTTCCTGACCACCCGCCAGACGCTGT  148

Query  128  G-CGGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGG  200
            | ||| |||||||||||||||||||||||||||||.|||||.||||||||.||.||||||.|||||||||||||
Sbjct  149  GTCGG-GAGCAGAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAATCGGACAGGGATGAGACCGG  221

Query  201  GGCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGC  274
            ||||||||||||||||||||||||||||||||||||||||||||||||.||||||.|||||||.||..||||||
Sbjct  222  GGCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAATTTCCTCAGGCATGGAAAATTGGTGC  295

Query  275  TGGACAAGGACATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATC  348
            ||||||||||||||||.|||||||||||||||||||||||.||||||||||||||.||.||.|||||.||.|||
Sbjct  296  TGGACAAGGACATGGCCGAGGAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATTGGTCCTCTGATTCGAATC  369

Query  349  ATCAAAGACCGGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCATGTGTACCGCGTGCTGCA  422
            |||||||||.|||||||.|||||.||||||||.||..|||||||.|||||.||||||||.|||||.||||||||
Sbjct  370  ATCAAAGACAGGATGGAGGAGAAAGACTACACAGTGGCCCAGGTGCCACCTAAGCATGTATACCGAGTGCTGCA  443

Query  423  GTGCCAGGAGGAGGAGCTCACGCAAATGGTCTCAACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACA  496
            ||||||.||||||||||||||.||.|||||.||.||.|||||.||.||||||||||||||||||||||||||||
Sbjct  444  GTGCCAAGAGGAGGAGCTCACACAGATGGTATCCACTATGTCCGACGGCTGGCGCTTCGAGCAGCTGGTGAACA  517

Query  497  TCGGCTCGTCCTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGC  570
            |||||||.|||||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||||||||||||
Sbjct  518  TCGGCTCCTCCTACAACTATGGGAGTGAGGACCAGGCCGAGTTCCTGTGTGTGGTGTCTAAGGAGCTCCACAGC  591

Query  571  ACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCA  644
            .|||||.||||.||||||||.|||||||..|||||..|||||||||||||.|||||||||||||||||||.||.
Sbjct  592  TCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGCAGCTGGAGGAGCAGCGGCG  665

Query  645  GCAGGAGGAGGAGGTGGAGGAGGTGGAGGTGGAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAAAGCCCAGT  718
            ||      ||||||||||||||||||||||||..|||||||||||||||||.|||||.|||||||||||||.||
Sbjct  666  GC------AGGAGGTGGAGGAGGTGGAGGTGGCCCAGGTGCAGGTGGAGGCGGATGCCCAGGAGAAAGCCCTGT  733

Query  719  CATCTCAGGATCCCGCTAACCTTTTCTCCCTCCCACCACTG---CCTCCTCCTCCGCTTCCCGCTGGAGGT---  786
            |||||||||||||||||||||||||||||||||||||||.|   |||||||||||||||||.|||||||||   
Sbjct  734  CATCTCAGGATCCCGCTAACCTTTTCTCCCTCCCACCACCGCCTCCTCCTCCTCCGCTTCCTGCTGGAGGTCCT  807

Query  787  ----------------------------------TCCCGTCCGCA-----------CCCTCTCAG-ACCTG---  811
                                              ||.|.||.|||           |||||||.| .||||   
Sbjct  808  GCTTCATCTTCATCCACCTCCTCTTCCTCCTGGATCTCATCTGCACCCTGCCTCTTCCCTCTCTGCCCCTGCCC  881

Query  812  AGG------CTGAGCTTG------------CAGTGAGGGCT-------------TCTCCTCGGCCCCTCGCCC-  853
            |||      ||..||.||            |..|| |||||             ||||| ||..|||||.||| 
Sbjct  882  AGGTTTCCTCTCCGCCTGCTCCCGTCTCCACCCTG-GGGCTGCCCTAGTCCCAGTCTCC-CGCGCCCTCTCCCC  953

Query  854  --GCCCCC-AGAGCTGCCATCCCTGCTGTTACAAGCCAGAGGCACCCGGATG--TGAGGCC-------------  909
              |||||| .|..||| ||||||        |||       |||.||   ||  ||..|||             
Sbjct  954  AAGCCCCCTCGCCCTG-CATCCC--------CAA-------GCATCC---TGCCTGCCGCCTCCTTCGCCCCTT  1008

Query  910  CCAGATCACCTCC--------------------AGGGACTTGGGGTTCC-CATC--------------------  942
            ||||  |.|||||                    ||||.|.|||    || ||||                    
Sbjct 1009  CCAG--CCCCTCCTGCCTCCTGGCCTGGGGAGGAGGGGCGTGG----CCGCATCTGCTCTTTGTCCTCCAACCC  1076

Query  943  -------------  942
                         
Sbjct 1077  AGCAGAGCACCTC  1089