Nucleotide Global Alignment
Description
- Query:
- TRCN0000470628
- Subject:
- NR_148058.2
- Aligned Length:
- 3434
- Identities:
- 1094
- Gaps:
- 2338
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGTGTCAACGAGCCCCCGAACGGTTCCGCCTCATTCCCTCTCTGTGTGCCTCGCAAGTCTCTGCTTAGTAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGTCACAGCTTCGGCGCGCGAGAGTGGCGTTGGCACGTCCAAACCCCGGGGTCCTCGGCCAGGCCAGGGGGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCGTGCGGCGGGGCCGGGCCGGGCCGGGCGCGCCCAGCGGGCTCCGGGCACACGCCCCTCACCTGGGCGAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCGGTGCGCAGGCGCTCAGCGCGGGGGCAGCGGCCGGGCGCTTAAGCCCGGCGCGGGCAAGAGTTGGACAGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGGGCCGCGCCGGGCCGAGCTGTCGCCCGCGCCACCTCCACCGCCGCCGCTGCTACCGCCACCGCCACCGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGCTGCAGCAGATCGCGGGAGAACGTCTGCGCGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGAGCGTGAGCAACAGCTTCCCGGCTGGAGGAGCCACTGCCCCACGCGCCCGCGGCCCGCGCGCCGAGATGTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TACATTTCAACTCCATCAAATATTAAATTGATGTTTATGGGCTAACCTGGAAACCGAAAAACAGTTTGTTTCAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TACAAGAATAAGAAAATATGTCCAAATTCCTGTCAGCTGACTTATAAAGGGACTTTTAGAACACAACCCAATGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATGAGGTACTCCTTAAGCCCTGACAACCATCTTGAAGATGGAATCATGAATATGGCAAATTTTCTACGGGGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGAAGAAAAGGGGATAAAGAACGACAGGCCTGAGGACCAGTTGAGCAAAGAGAAAAAGAAAATTCTTTTCTCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCTGTGAGGTGTGCAACATCCAGCTGAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGCAAATCCCACCGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCAGCAGCAACAGCAGCAC 962
Query 1 -------------------------------------------------------ATGATGCATCCTTCACTGG 19
||||||||.||||||||||
Sbjct 963 AGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTACCCTGATGATGCAGCCTTCACTGG 1036
Query 20 ATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACA--- 90
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAAAA 1110
Query 91 ------------------------------------ATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATT 128
||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGAAGAGGCTTATTTGAGACCAATAAATTTTGCCAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATT 1184
Query 129 TGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATA 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATA 1258
Query 203 GCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAA 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAA 1332
Query 277 CCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAA 1406
Query 351 CTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCT 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCT 1480
Query 425 CATTTATCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGA 498
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CATTTCTCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGA 1554
Query 499 GCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCAAAGTGGC 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCAAAGTGGC 1628
Query 573 TGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAATG 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAATG 1702
Query 647 GGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGA 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGA 1776
Query 721 CTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAACAGCACAT 794
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAAC------- 1843
Query 795 TTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAACTCC 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1844 ----AGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAACTCC 1913
Query 869 AGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTC 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 AGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTC 1987
Query 943 CTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCT 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1988 CTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCT 2061
Query 1017 CTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCA 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2062 CTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCA 2135
Query 1091 TCCTCTTTGCTCCGTAC--------------------------------------------------------- 1107
|||||||||||||||||
Sbjct 2136 TCCTCTTTGCTCCGTACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCA 2209
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2210 CAAGGATTCAGCAATTTAAGCAGTTTGTGTTGCAGTACCCCCCATTCACCCACAAAATGCAGCCCACCACCCAG 2283
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2284 TCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTGCTCCTATAATTGAGGAAT 2357
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2358 CAGCAGCATAGGCTTTATCTCCCTACTTCCTCCCCCACCCTACCGCGTTCAATTTGTGTATCTCAGATATTTGA 2431
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2432 TTTCTTGAGCATGTATTGGTCAGAAAGAAAAAGAAAGAAAACCATTCTCTATTTTTCCATGGGTATGATCTGGC 2505
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2506 TTAAAACAATATGGAATATTTTCCTGACAGACTTGAAAACTAGGATCTTCCTCAGATGTCTGTAAATAACTCTG 2579
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2580 GTATCCAACTGGGTGTATTCTAGTGTGGAACAAAAAACAGTGAACACAAGTGCTTACTTGTGGATACTATCTTA 2653
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2654 CCAACGGATCACAAAGTTCTCTTTTTGGTGTACTGTTGTTGACAGGGATTGTGTACTGTTTCGACCCAAGTACT 2727
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2728 GCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAATTAAACATTTTTAGTTGCTGTGTAAATGTTAG 2801
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2802 GAAGCAAAGTAGCTTTGAATTTTCTCTGTAAGAGAATAAAAGATAAAATAATGTATTTTCTTTATTTCACATTT 2875
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2876 TATTTGGAGATATTTAAATGAAATAGAAAGCCATATAACATAGCTATAATTACTACCTGTTTGCTATTTTTGTT 2949
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2950 TAACTTATTTTGTAGCTTCCTCACTGGTTTGTGTTGCTAAGCAAACGTATACAAACAGAAAAAGAGCTTCCTAA 3023
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 3024 ATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATTTCTATATAAGTATCTTC 3097
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 3098 TTCATTTTTAACCTGTTTTCATTTGTAATGATGCTACATAATTTTGTGGCTCCCTAATGCAATAATGTACAGAA 3171
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 3172 GATAAAAAAATTTATAATTGAACAATTTGTCTTTCTGTTCGCTGAATATATTGCAGGTCATGCTCCCATGCCCC 3245
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 3246 CCTTTCTAAGCCGATATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACAACAAAA 3319
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 3320 TAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAAATGGTAAAATGTCTGTGTATTTTTTTAAATGT 3393
Query 1108 ------------------------------ 1107
Sbjct 3394 ACCTTTTCAATAAAAGTACAAAAAATAAAA 3423
