Nucleotide Global Alignment
Description
- Query:
- TRCN0000470628
- Subject:
- XM_006499456.3
- Aligned Length:
- 1488
- Identities:
- 989
- Gaps:
- 384
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAACATGGCAACCTTCCTCCGGGGCTTTGAAGAAAAGGGGTTAAAGAACGACAGGCCTGGGGACCAGTTCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAAGGAGAAGAAGAAGATTCTCTTCTCCTTTTGTGAAGTGTGCAACATCCAGCTAAACTCCGCTGCTCAGGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGTCCATTATGACGGCAAATCCCATCGAAAGCGGGTCAAGCAGCTGAGCGATGGCCAGCCCCCACCCCCGGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGGGCTCAGTGCCACTGCTGGCTGGCCCTTGCCCTTGCCCTGGGCCTGGCCCGAACACCAGCACAGGCAGCGC 296
Query 1 ----------------------------------------------ATGATGCATCCTTCACTGGATATCAAAC 28
||||||||.|||||.|||||.|||||||
Sbjct 297 ATGCCACACCACTACCCTTCCTGCCCTCGTGCGCACACCCACCCTGATGATGCAGCCTTCGCTGGACATCAAAC 370
Query 29 CATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACA------------ 90
|.||.|||||||||||||||||||||||.|||||.||.||||||||||||||.|||||||||
Sbjct 371 CGTTCATGTCTTTTCCAGTGGACAGTAGCTCTGCCGTGGGGCTCTTTCCAAACTTTAACACAAAAAGAAGAGGC 444
Query 91 ---------------------------ATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATC 137
|||||.||||||||.|||||.||.||||||||.|||||||||||.||
Sbjct 445 TTATTTGGGACCAATAAGTTCTGCCAGATGGACCCTGTGCAGAAAGCAGTCATTAACCACACATTTGGAGTCTC 518
Query 138 CATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCG 211
|||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||||||.|||||||||||||
Sbjct 519 CATTCCCCCGAAGAAGAAACAAGTTATTTCCTGTAACGTCTGTCAGCTTCGCTTTAACTCGGATAGCCAGGCCG 592
Query 212 AGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAACCCAAAATG 285
|||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||
Sbjct 593 AGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCTCTAGAGGCAACGAAAAATAAACCCAAAATG 666
Query 286 GTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAACTCTGACAA 359
||||||||||||||||||||||||||||||||||||||||||||||..|||..|||||||.|||.|||||||||
Sbjct 667 GTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCAGGCCAGGCACAGGCGACAGCTCTGACAA 740
Query 360 ATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTATCC 433
|||||||||.|||||||||.|||||||||.|||||||||||||||.|||.||||.|||.|.|||||.|||.|||
Sbjct 741 ATCAGAAGACAAAGGGAAGATAAAAGCCACCAGTTCCAGTCAGCCCTCAGGCTCCGAAGGAGGCTCCTTTCTCC 814
Query 434 TCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGT 507
|||||||||||||||||||||||||||.||||||...|.||||||||||||||||||||||.||.|||||.||.
Sbjct 815 TCAAATCTGGCACAACACCCCTGCCACTTGGAGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCGCTCCAGGG 888
Query 508 ACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCAAAGTGGCTGTGAACTC 581
.||||||.|||.|||||||||||||||||||||||||||||.||.||.|||||||||||.||||||||||||||
Sbjct 889 TCTGTTGCTGAGTCAGAAGAAGAAAAAGCCAAAAAATTACTCTACTGCTCACTATGCAAGGTGGCTGTGAACTC 962
Query 582 CCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTC 655
||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct 963 CCTGTCACAGCTGGAGGCTCACAACACAGGATCTAAACACAAGACCATGGTTGAGGCTCGTAATGGAGCTGGTC 1036
Query 656 CAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGACTACAGAAC 729
|||||||.||||||||.||||||||.||||||||||||.|||||||.|||||||||||.|||||||||||||||
Sbjct 1037 CAATTAAGTCCTATCCAAGACCTGGGTCAAGATTAAAGGTGCAGAACGGCAGTAAGGGCTCAGGACTACAGAAC 1110
Query 730 AAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAACAGCACATTTCTAGCCG 803
||.|..|||||||||||.||||||||||||||.||.||.|||||.|||||||||||||||||||||||.|||||
Sbjct 1111 AAAATGTTTCATTGTGAGATCTGTGATGTTCACGTGAACTCAGAGATTCAACTCAAACAGCACATTTCAAGCCG 1184
Query 804 AAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAACTCCAGCGGAGCC 877
||||||||||||.||.||.|||||.|||||.||||||||.|||||||||||.||||||||.||.||||||||||
Sbjct 1185 AAGGCATAAAGACCGCGTGGCAGGAAAACCGCTGAAGCCGAAATACAGCCCCTACAACAAGCTGCAGCGGAGCC 1258
Query 878 CGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCA 951
|.||.||..||||.|||||.||||||||||||||||||.|||||||||||.|||||||..|.||||||||.|||
Sbjct 1259 CAAGCATCTTAGCTGCAAAGCTTGCATTCCAGAAAGATCTGATGAAGCCTCTGGCCCCTACGTTCCTGTCTTCA 1332
Query 952 CCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGC 1025
||.|| .|||||.||||||||||||||.|||||||||||.|||||.|||||.||.|||||.||.||||||||
Sbjct 1333 CCCCT---GGCGGCCGCAGCCGTGTCCTCTGCGCTGTCACTGCCACCTCGGCCATCCGCCTCTCTGTTCCAGGC 1403
Query 1026 TCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTG 1099
|.|||||||.|||||.||.||.|||||||||||.||.|||||||||||.|||||.||.||||||||||||||||
Sbjct 1404 TGCAGCCATCCCTCCTGCGCTGCTGAGGCCTGGCCACGGGCCCATCCGGGCCACGCCCGCCTCCATCCTCTTTG 1477
Query 1100 CTCCGTAC 1107
|.||.|||
Sbjct 1478 CCCCTTAC 1485