Nucleotide Global Alignment
Description
- Query:
- TRCN0000470716
- Subject:
- XM_006538451.2
- Aligned Length:
- 2064
- Identities:
- 927
- Gaps:
- 1026
Alignment
Query 1 ATGGACGGCTCCTTCGTCCAGCACAGTGTGAGGGTTCTGCAGGAGCTCAACAAGCAGCGGGAGAAGGGCCAGTA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTGCGACGCCACTCTGGACGTGGGGGGCCTGGTGTTTAAGGCACACTGGAGTGTCCTTGCCTGCTGCAGTCACT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTTTCCAGAGCCTCTACGGGGATGGCTCAGGGGGCAGTGTCGTCCTCCCTGCTGGCTTCGCTGAGATCTTTGGC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTCTTGTTGGACTTTTTCTACACTGGTCACCTCGCTCTCACCTCAGGGAACCGGGATCAGGTGCTCCTGGCAGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAGGGAGTTGCGAGTGCCAGAGGCCGTAGAGCTGTGCCAGAGCTTCAAGCCCAAAACTTCAGTGGGACAGGCAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CAGGTGGCCAGAGTGGGCTGGGGCCCCCTGCCTCCCAGAATGTGAACAGCCACGTCAAGGAGCCGGCAGGCTTG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAAGAAGAGGAAGTTTCGAGGACTCTGGGTCTAGTCCCCAGGGATCAGGAGCCCAGAGGCAGTCATAGTCCTCA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GAGGCCCCAGCTCCATTCCCCAGCTCAGAGTGAGGGCCCCTCCTCCCTCTGTGGGAAACTGAAGCAGGCCTTGA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AGCCTTGTCCCCTTGAGGACAAGAAACCCGAGGACTGCAAAGTGCCCCCAAGGCCCTTAGAGGCTGAAGGTGCC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CAGCTGCAGGGCGGCAGTAATGAGTGGGAAGTGGTGGTTCAAGTGGAGGATGATGGGGATGGCGATTACATGTC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TGAGCCTGAGGCTGTGCTGACCAGGAGGAAGTCAAATGTAATCCGAAAGCCCTGTGCAGCTGAGCCAGCCCTGA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 GCGCGGGCTCCCTAGCAGCTGAGCCTGCTGAGAACAGAAAAGGTACAGCGGTGCCGGTCGAATGCCCCACATGT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 CATAAAAAGTTCCTCAGCAAATATTATCTAAAAGTCCACAACAGGAAACATACTGGGGAGAAACCCTTTGAGTG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 TCCCAAATGTGGGAAGTGTTACTTTCGGAAGGAGAACCTCCTGGAGCATGAAGCCCGGAATTGCATGAACCGCT 1036
||||||||||
Sbjct 1 ----------------------------------------------------------------ATGAACCGCT 10
Query 1037 CGGAACAGGTCTTCACGTGCTCTGTGTGCCAGGAGACATTCCGCCGAAGGATGGAGCTGCGGGTGCACATGGTG 1110
|.||||||||||||||.|||||.||.|||||||||||.|||||.||.||||||||||||||..|||||||||||
Sbjct 11 CAGAACAGGTCTTCACATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCTGCGCTTGCACATGGTG 84
Query 1111 TCTCACACAGGGGAGATGCCCTACAAGTGTTCCTCCTGCTCCCAGCAGTTCATGCAGAAGAAGGACTTGCAGAG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 85 TCTCACACAGGGGAGATGCCCTACAAGTGTTCCTCCTGCTCCCAGCAGTTCATGCAGAAGAAAGACTTGCAGAG 158
Query 1185 CCACATGATCAAACTTCATGGAGCCCCCAAGCCCCATGCATGCCCCACCTGTGCCAAGTGCTTCCTGTCTCGGA 1258
||||||||||||.||.||.||||||||.||.|||||.|||||||||||.|||||||||||||||||||||.|||
Sbjct 159 CCACATGATCAAGCTGCACGGAGCCCCTAAACCCCACGCATGCCCCACTTGTGCCAAGTGCTTCCTGTCTAGGA 232
Query 1259 CAGAGCTGCAGCTGCATGAAGCTTTCAAGCACCGTGGTGAGAAGCTGTTTGTGTGTGAGGAGTGTGGGCACCGG 1332
|.|||||.||||||||.||.|||||.|||||.|||||.||.|||||.||||||||||||||.||.|||||||||
Sbjct 233 CGGAGCTACAGCTGCACGAGGCTTTTAAGCATCGTGGAGAAAAGCTCTTTGTGTGTGAGGAATGCGGGCACCGG 306
Query 1333 GCCTCGAGCCGGAATGGCCTGCAGATGCACATCAAGGCCAAGCACAGGAATGAGAGGCCACACGTATGTGAGTT 1406
|||||||||||.||.||.|||||||||||||||||||||||||||||||||||.|||||..|.||.||||||||
Sbjct 307 GCCTCGAGCCGCAACGGACTGCAGATGCACATCAAGGCCAAGCACAGGAATGAAAGGCCTTATGTCTGTGAGTT 380
Query 1407 CTGCAGCCACGCCTTCACCCAAAAGGCCAATCTCAACATGCACCTGCGCACACACACGGGTGAGAAGCCCTTCC 1480
|||||||||.|||||||||||.||||||||.||||||||||||||||||||||||||.||.||||||||.||||
Sbjct 381 CTGCAGCCATGCCTTCACCCAGAAGGCCAACCTCAACATGCACCTGCGCACACACACCGGCGAGAAGCCTTTCC 454
Query 1481 AGTGCCACCTCTGTGGCAAGACCTTCCGAACCCAAGCCAGCCTGGACAAGCACAACCGCACCCACACCGGGGAA 1554
||||||||||||||||.|||||||||||.|||||||||||..|||||||||||||||||||||||||.||.||.
Sbjct 455 AGTGCCACCTCTGTGGGAAGACCTTCCGCACCCAAGCCAGTTTGGACAAGCACAACCGCACCCACACGGGCGAG 528
Query 1555 AGGCCCTTCAGTTGCGAGTTCTGTGAACAGCGCTTCACTGAGAAGGGGCCCCTCCTGAGGCACGTGGCCAGCCG 1628
|||||.|||||.||.||.||||||||.||||||||||||||||||||.|||||.||||||||.|||||||||||
Sbjct 529 AGGCCTTTCAGCTGTGAATTCTGTGAGCAGCGCTTCACTGAGAAGGGCCCCCTTCTGAGGCATGTGGCCAGCCG 602
Query 1629 CCATCAGGAGGGCCGGCCCCACTTCTGCCAGATATGCGGCAAGACCTTCAAAGCCGTGGAGCAACTGCGTGTGC 1702
||||||.||||||.|||||||||||||||||||.||.|||||||||||||||||.|||||.||..|.||.||||
Sbjct 603 CCATCAAGAGGGCAGGCCCCACTTCTGCCAGATCTGTGGCAAGACCTTCAAAGCTGTGGAACAGTTACGAGTGC 676
Query 1703 ACGTCAGACGGCACAAGGGGGTGAGGAAGTTTGAGTGCACCGAGTGTGGCTACAAGTTTACCCGACAGGCCCAC 1776
|||||||.||.|||||.||.|||||.|||||.||||||||||||||||||||||||||.||.||.|||||.|||
Sbjct 677 ACGTCAGGCGACACAAAGGTGTGAGAAAGTTCGAGTGCACCGAGTGTGGCTACAAGTTCACGCGGCAGGCTCAC 750
Query 1777 CTGCGGAGGCACATGGAGATCCACGACCGGGTAGAGAACTACAACCCGCGGCAGCGCAAGCTCCGCAACCTGAT 1850
|||||||||||||||||||||||||||.|.||.|||||||||||.||.|||||||||||||||||.|||||.||
Sbjct 751 CTGCGGAGGCACATGGAGATCCACGACAGAGTGGAGAACTACAATCCCCGGCAGCGCAAGCTCCGGAACCTCAT 824
Query 1851 CATCGAGGACGAGAAGATGGTGGTGGTGGCGCTGCAGCCGCCTGCAGAGCTGGAGGTGGGCTCGGCGGAGGTCA 1924
|||.|||||.||||||||||||||.|||||.||.|||||.||||||||.||||||||||||||.||.|||||||
Sbjct 825 CATTGAGGATGAGAAGATGGTGGTCGTGGCTCTCCAGCCCCCTGCAGACCTGGAGGTGGGCTCTGCTGAGGTCA 898
Query 1925 TTGTGGAGTCCCTGGCCCAGGGCGGCCTGGCCTCCCAGCTCCCCGGCCAGAGACTGTGTGCAGAGGAGAGCTTC 1998
||||||||||||||.|||||||.|||||.||||||||.|||||..||||||||||||||.|||||||||||||.
Sbjct 899 TTGTGGAGTCCCTGACCCAGGGTGGCCTTGCCTCCCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTT 972
Query 1999 ACCGGCCCAGGTGTCCTGGAGCCCTCCCTCATCATCACAGCTGCTGTCCCCGAGGACTGTGACACA 2064
.|..||||.||.||||||||||||||.|||||||||||.||||||||.|||||||||||||||||.
Sbjct 973 GCTAGCCCTGGCGTCCTGGAGCCCTCTCTCATCATCACCGCTGCTGTTCCCGAGGACTGTGACACG 1038
