Nucleotide Global Alignment

Description

• Query: TRCN0000470917
• Subject: NM_001199922.1
• Aligned Length: 1578
• Identities: 423
• Gaps: 1125

Alignment

Query    1  ATGGTCGCGCCGGGGCTTGTACTCGGGCTGGTGCTGCCATTAATCCTGTGGGCCGACAGAAGTGCAGGTATTGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGCAGTGATATGGGGCT  148
                                           |||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  -------------------------------ATGGTGCTGCAGAAGGAGCCTGCTGGGGCAGTGATATGGGGCT  43

Query  149  TCGGTACACCTGGAGCCACAGTGACCGTGACCCTGCGCCAAGGTCAGGAAACCATCATGAAGAAAGTGACCAGT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   44  TCGGTACACCTGGAGCCACAGTGACCGTGACCCTGCGCCAAGGTCAGGAAACCATCATGAAGAAAGTGACCAGT  117

Query  223  GTGAAAGCTCACTCTGATACGTGGATGGTGGTACTGGATCCTATGAAGCCTGGAGGACCTTTCGAAGTGATGGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  118  GTGAAAGCTCACTCTGATACGTGGATGGTGGTACTGGATCCTATGAAGCCTGGAGGACCTTTCGAAGTGATGGC  191

Query  297  ACAACAGACTTTGGAGAAAATAAACTTCACCCTGAGAGTTCATGACGTCCTGTTTGGAGATGTCTGGCTCTGTA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  192  ACAACAGACTTTGGAGAAAATAAACTTCACCCTGAGAGTTCATGACGTCCTGTTTGGAGATGTCTGGCTCTGTA  265

Query  371  GTGGGCAGAGTAACATGCAGATGACTGTGTTACAGGTAATT--------------------------TGCAG--  416
            |||||||||||||||||||||||||||||||||||.||.||                          |||.|  
Sbjct  266  GTGGGCAGAGTAACATGCAGATGACTGTGTTACAGATATTTAATGCTACAAGGGAGTTGTCTAACACTGCGGCA  339

Query  417  ----AGTC--TCAGCAAT---------------AATACA--CAG-------------------TGTTGGTGATG  448
                ||||  ||.|| ||               .||.||  |||                   |||||..|.||
Sbjct  340  TATCAGTCTGTCCGC-ATCCTCTCTGTCTCTCCCATTCAAGCAGAGCAGGAGCTGGAGGACCTTGTTGCGGTTG  412

Query  449  A-----AG------AAG---------GAAAA-GAAGG--AGGAATAAGGGGGCAACAAGGAGA----AGCAG--  493
            |     ||      |||         ||||| ..|||  |.|.|||      ...||||.|.|    |||||  
Sbjct  413  ACTTGCAGTGGTCTAAGCCCACCTCAGAAAACTTAGGCCATGGATA------TTTCAAGTACATGTCAGCAGTG  480

Query  494  ----GGCTGTTTCTA-------TTTAGTG---------AGTA--CCAT--------------------------  519
                ||||.|||..|       |||| ||         ||||  ||||                          
Sbjct  481  TGCTGGCTCTTTGGACGTCACCTTTA-TGACACTCTGCAGTATCCCATCGGGCTGATCGCCTCCAGCTGGGGCG  553

Query  520  ------------GAGCC----------------------AAG-------------------------------A  528
                        .||||                      |||                               |
Sbjct  554  GGACACCCATTGAAGCCTGGTCATCTGGACGGTCACTGAAAGCCTGTGGGGTCCCTAAACAAGGGTCCATTCCA  627

Query  529  TA------------------------------TGTTCT---AAATGCTTTGAATGAATTCATT----AATTTGA  565
            ||                              ||||||   .|||||..|| ||..||.||.|    |||.|||
Sbjct  628  TACGATTCTGTAACTGGTCCCAGTAAGCACTCTGTTCTCTGGAATGCCATG-ATCCATCCACTGTGCAATATGA  700

Query  566  CT------------------------------------------------------------------------  567
            ||                                                                        
Sbjct  701  CTCTGAAAGGGGTAGTATGGTACCAGGGGGAGTCCAATATAAATTATAACACGGATCTGTACAATTGCACATTC  774

Query  568  --------------------------------------------------------------------------  567
                                                                                      
Sbjct  775  CCTGCACTCATCGAAGACTGGCGTGAAACCTTCCACCGTGGTTCCCAGGGGCAGACGGAGCGTTTCTTCCCATT  848

Query  568  --------------------------------------------------------------------------  567
                                                                                      
Sbjct  849  TGGACTTGTCCAGTTATCTTCAGATTTGTCTAAGAAGAGCTCAGACGATGGATTTCCCCAGATCCGTTGGCATC  922

Query  568  --------------------------------------------------------------------------  567
                                                                                      
Sbjct  923  AAACAGCAGACTTCGGCTATGTCCCCAACCCAAAGATGCCCAATACTTTCATGGCTGTAGCTATGGATCTCTGT  996

Query  568  --------------------------------------------------------------------------  567
                                                                                      
Sbjct  997  GATAGAGACTCGCCTTTTGGCAGCATCCACCCTCGAGATAAACAGACTGTGGCTTATCGGCTGCATTTGGGGGC  1070

Query  568  --------------------------------------------------------------------------  567
                                                                                      
Sbjct 1071  CCGTGCTCTGGCTTATGGTGAGAAGAATTTGACCTTTGAAGGACCACTGCCTGAGAAGATAGAACTCTTGGCTC  1144

Query  568  --------------------------------------------------------------------------  567
                                                                                      
Sbjct 1145  ACAAGGGGCTGCTCAATCTCACATATTACCAGCAAATCCAGGTGCAGAAAAAGGACAACAAGATATTTGAGATC  1218

Query  568  --------------------------------------------------------------------------  567
                                                                                      
Sbjct 1219  TCCTGTTGCAGTGACCATCGATGCAAGTGGCTTCCAGCTTCTATGAACACCGTCTCCACCCAGTCCCTGACCCT  1292

Query  568  --------------------------------------------------------------------------  567
                                                                                      
Sbjct 1293  GGCGATCGATTCTTGTCATGGCACTGTGGTTGCTCTCCGCTATGCTTGGACCACGTGGCCTTGTGAATATAAGC  1366

Query  568  --------------------------------------------------------------------------  567
                                                                                      
Sbjct 1367  AGTGTCCCCTATACCACCCCAGTAGTGCCCTGCCAGCCCCTCCCTTCATTGCTTTCATTACAGACCAGGGTCCT  1440

Query  568  ------------------------  567
                                    
Sbjct 1441  GGACATCAGAGCAATGTTGCTAAA  1464