Nucleotide Global Alignment

Description

Query:
TRCN0000471001
Subject:
XM_006525497.3
Aligned Length:
3587
Identities:
2500
Gaps:
760

Alignment

Query    1  ATGGGGCCACGAAAGAAAAGTGTGAAAACATGTATCATGAATAATGAAATTCCAGAAGAAATGACAGCAGATGA  74
            |||||.||||||||||||||||..|||...|||.|.|||.|.|.|||..|..|.||.|||||||||||.|||||
Sbjct    1  ATGGGACCACGAAAGAAAAGTGCTAAAGTGTGTGTGATGGACAGTGAGGTCGCTGAGGAAATGACAGCCGATGA  74

Query   75  AACAAAGGACTATATGAATCAACTTTCACATGAAGTACTTTGCCATATTTTTAGGTACCTCCCTCTGCAGGATA  148
            |...||||||||.|||||.||.||.|||||||||||.||.||.|||||.||.||||||||.||.||.|||||.|
Sbjct   75  AGAGAAGGACTACATGAACCAGCTGTCACATGAAGTGCTCTGTCATATCTTCAGGTACCTGCCACTACAGGACA  148

Query  149  TCATGTGTATGGAATGTCTTTCCCGGAAGCTAAAGGAAGCAGTGACCCTATATCTGCGAGTTGTGAGAGTTGTA  222
            |||||||.||||||||.||.||.||||||||||||||.|||||.||.||.||||||.|||||||.|||||.||.
Sbjct  149  TCATGTGCATGGAATGCCTCTCTCGGAAGCTAAAGGAGGCAGTCACTCTGTATCTGAGAGTTGTCAGAGTGGTG  222

Query  223  GATCTCTGTGCAGGGCGGTGGTGGGAATACATGCCAAGTGGCTTTACAGATGCCAGTTTTCTAACACTATTAAA  296
            |||||||||||||||||.|||||||||||.||||||||||||||.||||||.|||||||.|||||.||.||.||
Sbjct  223  GATCTCTGTGCAGGGCGCTGGTGGGAATATATGCCAAGTGGCTTCACAGATTCCAGTTTCCTAACCCTTTTGAA  296

Query  297  GAAGATGCCAGATGTTGAACAGCTATATGGCCTTCACCCTCGATACCTTGAGAGGCGAAGAGTAAGGGGCCATG  370
            ||||||||||||||||||||||||.|||||||||||||||.|||||||.||||||||||||||.||||||||.|
Sbjct  297  GAAGATGCCAGATGTTGAACAGCTGTATGGCCTTCACCCTAGATACCTCGAGAGGCGAAGAGTGAGGGGCCAGG  370

Query  371  AGGCTTTTAGCATTCCAGGAGTCCTAGAAGCTTTGCAGGCATGCCCAAACTTAGTGGGTGTGGAAACTTCTCAT  444
            |||||||.|||||.|||||||||.|.|||||||||||.||.|||||||||||.||||||||.|||||.||||||
Sbjct  371  AGGCTTTCAGCATCCCAGGAGTCTTGGAAGCTTTGCAAGCGTGCCCAAACTTGGTGGGTGTAGAAACATCTCAT  444

Query  445  TTGGAGTTGGTAGAATCCATTTGGACATATATGCCCCATGTTCATATTTTGGGGAAATTTCGTAATCGTAATGG  518
            |||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||
Sbjct  445  TTGGAGTTGGTAGAATCCATTTGGACATATATGCCGCATGTTCATATTTTGGGGAAATTTCGTAATCGTAACGG  518

Query  519  AGCTTTTCCAATTCCTCCTGAAAATAAACTGAAAATTCCTATAGGAGCCAAAATTCAAACTTTACATTTAGTTG  592
            |||.|||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||.||||||||||
Sbjct  519  AGCATTTCCGATTCCTCCTGAAAATAAACTGAAAATCCCCATAGGAGCCAAAATCCAAACTTTGCATTTAGTTG  592

Query  593  GGGTGAATGTTCCTGAAATTCCTTGTATCCCAATGCTAAGGCACCTTTATATGAAGTGGGTAAGACTCACTAAA  666
            |.||.||||||||||||||.|||||||||||.||||||||||||||.||.|||||||||||.||||||||||||
Sbjct  593  GTGTCAATGTTCCTGAAATCCCTTGTATCCCTATGCTAAGGCACCTGTACATGAAGTGGGTGAGACTCACTAAA  666

Query  667  CCACAGCCATTTAAAGACTTCCTTTGTATCAGCTTAAGAACTTTCGTCATGAGGAACTGTGCAGGACCCACAAA  740
            ||||||||.||||||||.||||||||.||||||||..|||||||.|||||||||||||||||||||||.|||||
Sbjct  667  CCACAGCCGTTTAAAGATTTCCTTTGCATCAGCTTGCGAACTTTTGTCATGAGGAACTGTGCAGGACCAACAAA  740

Query  741  TTCCTTGAAATATGTCCCTTTAGTAACAGGCTTAGCCTCTGCCCGAAACTTGGAACACTTAGAAATGGTTCGAG  814
            .|||||||||||.||.||.||.||||||||..|.||.||||||||.|||.||||||||||.|||||||||||||
Sbjct  741  CTCCTTGAAATACGTGCCCTTGGTAACAGGTCTGGCATCTGCCCGTAACCTGGAACACTTGGAAATGGTTCGAG  814

Query  815  TTCCTTTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGACAGTTGGAGATCAGGTGGTTTTAGAAATTTGCAC  888
            |.||||||||.||||||||.||||||||.||.|||||||||||.||||||||||||||||||||.||.||||||
Sbjct  815  TCCCTTTCCTGGGAGGTCTCATCCAACACGTGGTTGAAGACAGCTGGAGATCAGGTGGTTTTAGGAACTTGCAC  888

Query  889  ACTATTGTTCTGGGAGCTTGCAAAAATGCTCTTGAAGTAGATCTTGGTTACCTCATCATTACTGCTGCCCGTAG  962
            ||||||||..|.|||||||||||.|||||.||.||||||||.|||||.|||||||||||.||||||||.||.||
Sbjct  889  ACTATTGTCTTAGGAGCTTGCAAGAATGCCCTGGAAGTAGACCTTGGCTACCTCATCATCACTGCTGCGCGAAG  962

Query  963  GTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGTTGG  1036
            |||||||||||||||.|||||||||||..||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  963  GTTACATGAAGTTCGCATCCAGCCTTCTTTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAATTGG  1036

Query 1037  AGTTTCCCCAGTTTGAAACCCTTCATCTAGGATATGTAGATGAGTTTTTGCTACAGAGCAGAATGGCTAATGCG  1110
            ||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||.|||||.
Sbjct 1037  AGTTTCCCCAGTTTGAAACCCTTCATCTGGGATATGTAGATGAGTTCTTGCTACAGAGCAGAATGGCGAATGCA  1110

Query 1111  GATCTGGTGAAGTATGGTTTGGCTGATGTGGTAGAAAATCCTGGTATCATCACTGATATAGGGATGAAAGCAGT  1184
            |||.|||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||
Sbjct 1111  GATTTGGTGAAGTATGGCTTGGCTGATGTGGTAGAAAATCCTGGTATCATTACTGATATAGGGATGAAGGCAGT  1184

Query 1185  CAATGAAGTTTTTTCCTGTATCAAATATCTGGCAATTTACAATTGCCCTCATCTACACAACCCATACAATTGGA  1258
            |||||||||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||||
Sbjct 1185  CAATGAAGTTTTTTCCTGTATCAAATATCTGGCAATTTATAACTGTCCTCATCTACACAACCCATACAATTGGA  1258

Query 1259  TCTCAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCT  1332
            |||||||||||||.||.||||..|||.||||||||||||||||.||.|||||||||||||||||||||||.|||
Sbjct 1259  TCTCAGACCACTCGAGGTGGATGCGACTGGTTGATATCAACCTCGTGCGGTGCCATGCTTTGAAGCTGGATTCT  1332

Query 1333  TTTGGCCAGTTTATTGAATTATTACCCAGCCTAGAGTTTATTTCACTGGATCAGATGTTTCGTGAACCACCCAA  1406
            ||||||||||||.||||||||||.||||||||.||.||||||||.|||||.||||||||.|||||.||||||||
Sbjct 1333  TTTGGCCAGTTTGTTGAATTATTGCCCAGCCTGGAATTTATTTCTCTGGACCAGATGTTCCGTGAGCCACCCAA  1406

Query 1407  GGGTTGTGCTCGAGTTGGTCTGAGTGCAGGCACAGGAATTGGTGTTTCATCAGCTCTTGTTAGCAACCAGAACT  1480
            |||.||||||||||||||||||||||||||.||.||||||||.|||||.|||||.|||||.|||||||||||.|
Sbjct 1407  GGGCTGTGCTCGAGTTGGTCTGAGTGCAGGAACTGGAATTGGGGTTTCCTCAGCGCTTGTCAGCAACCAGAATT  1480

Query 1481  CCAACAATGAC---GATAATAATGC-CCAGAATAACAATGCCAACATCCACGACAACAATCACCATCATCCAGA  1550
            |||||||||||   ||.|||||||| ||| ||||||||.||||||.||||.||.||||||||||||||.|||||
Sbjct 1481  CCAACAATGACAATGACAATAATGCTCCA-AATAACAACGCCAACCTCCATGATAACAATCACCATCACCCAGA  1553

Query 1551  TGACTCAGACGAGGAGAATGACTTTCGGCAAGATCTGCAGCCAGGAGA-GCAGCAGTTTGCAGCTGACGCATTA  1623
            |||.||.||.||.||.|||||||||||.|.|||.||.||..||||||| ||| ||.||||||||.||.||.||.
Sbjct 1554  TGATTCGGATGACGACAATGACTTTCGTCCAGACCTACAAGCAGGAGAGGCA-CAATTTGCAGCCGATGCGTTG  1626

Query 1624  AATGAGATGGAAGACATCGTCCAAGAAGATGGAGAGGTGGTGGCCGAGAGTGGAAATAATACTCCAGCTCACAG  1697
            |||||||||||||||||.|||||.|||||||||||..||||.|||||||||||||||..||..||||||||||.
Sbjct 1627  AATGAGATGGAAGACATGGTCCAGGAAGATGGAGAACTGGTAGCCGAGAGTGGAAATGGTATGCCAGCTCACAA  1700

Query 1698  CCAGGCAATTATTCCTGTGGATGTTGATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTGTAGTAAAACCAA  1771
            .|.||.|.||.||||||||||||.|||||||||||||||||||||.||||||||.||.||.||.||||||||.|
Sbjct 1701  TCGGGAAGTTCTTCCTGTGGATGCTGATGAGGAACAAGCAGGACCTAGTGGTCTACAACGCGTGGTAAAACCTA  1774

Query 1772  CCTCAATTACTGTTCATGATTCAGAGAGTGATGATGAAGAAGATAGTCTAGAACTCCAAGAAGTCTGGATTCCT  1845
            |..|||||.|||.|||.|||||||||||.||||||||||||||||||.||||||||||||||||||||..||||
Sbjct 1775  CACCAATTGCTGATCACGATTCAGAGAGCGATGATGAAGAAGATAGTTTAGAACTCCAAGAAGTCTGGGCTCCT  1848

Query 1846  AAGAACGGTACTCGGCGTTACTCTGAACGTGAAGAAAAAACTGGAGAGTCAGTGCAGTCCAGAGAA--------  1911
            |||||.||.||.|||||||||||.||.||.||||||||.||||||||.||||..||||||||.|||        
Sbjct 1849  AAGAATGGCACCCGGCGTTACTCAGAGCGGGAAGAAAAGACTGGAGACTCAGGACAGTCCAGGGAAACGGCAGC  1922

Query 1912  --------------------------TT----------------------------------------------  1913
                                      ||                                              
Sbjct 1923  AGTAAGTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGT  1996

Query 1914  --------------------------------------------------------------------------  1913
                                                                                      
Sbjct 1997  TTCCCCTGGAGGAGAGCAGCTGTGAGAAAGGCTGTCAGGTGACCAGTGAGCAGATCAAAGCCGATATGAAAGCA  2070

Query 1914  --------------------------------------------------------------------------  1913
                                                                                      
Sbjct 2071  GCTAGGGATGTTTCTGAAAAGAAAAAATCCAAGGATGTCTATCCCAGCTGCAGCAGCAGCAGCAGCAGCACAGC  2144

Query 1914  --------------------------------------------------------------------------  1913
                                                                                      
Sbjct 2145  CGCCAGCACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGGTGACCA  2218

Query 1914  --------------------------------------------------------------------------  1913
                                                                                      
Sbjct 2219  GCAGCGGCTCTTCCGAGCCGAGCCCTCCAGAAGTAGATGTATCCAGGCAGTGTGTCTGCTCCCCTGGTGGGTCA  2292

Query 1914  --------------------------------------------------------------------------  1913
                                                                                      
Sbjct 2293  GAGGACTCTGAGGCCATGGAGGAGGGAGATGCAGAGAGCTCTGTCTGCCCCAGATGCTGCTGTCTCAGGCCCCA  2366

Query 1914  --------------------------------------------------------------------------  1913
                                                                                      
Sbjct 2367  GGAGTCTCAAAGGAGAACTGGCAGGTGTTCTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATG  2440

Query 1914  --------------------------------------------------------------------------  1913
                                                                                      
Sbjct 2441  GCGCGGATGGTACGAGATCCGCCTTTTCCTTTAGGACTCTGCCACAAGGGGGGTCTTCAGGCCCAGCACATGAT  2514

Query 1914  --------------------------------------------------------------------------  1913
                                                                                      
Sbjct 2515  GAGAGGACTAATGGGAGTGGCTGTGGGGCTACAGGTGAGGACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGA  2588

Query 1914  --------------------------------------------------------------------------  1913
                                                                                      
Sbjct 2589  CGTGCAGTCTAATGAAGACTATCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACCGCTGA  2662

Query 1914  -------GTCAGAAGTAGCCAAAACAAAGCCACGTCACGCCATGAAACGGAAGCGGACAGCAGATAAATCCACT  1980
                   |||||||||.|||||||||||||||.|.||.|||||||||||.|||||.||.||||||||.||.||.
Sbjct 2663  TATCTGAGTCAGAAGTTGCCAAAACAAAGCCATGCCATGCCATGAAACGAAAGCGAACTGCAGATAAGTCTACC  2736

Query 1981  AGTACAAGTGATCCTGTGATCGAGGATGACCATGTGCAGGTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGT  2054
            ||.||.|||||.||||||||.||.||||||||.||.|||||||||||||||||||||||.||||||||||||||
Sbjct 2737  AGCACCAGTGACCCTGTGATTGAAGATGACCACGTACAGGTTCTTGTATTAAAATCCAAAAATCTTGTTGGAGT  2810

Query 2055  CACTATGACCAATTGTGGAATCACAGATCTAGTGCTAAAAGACTGTCCAAAGATGATGTTCATCCATGCTACCA  2128
            |||.|||||||||||||||||||||||||||||.||.||||||||.||.|||||||||||||||||||||||||
Sbjct 2811  CACAATGACCAATTGTGGAATCACAGATCTAGTACTGAAAGACTGCCCCAAGATGATGTTCATCCATGCTACCA  2884

Query 2129  GGTGCAGGGTACTAAAACATTTAAAGGTAGAAAATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAG  2202
            |||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2885  GGTGCAGGGTACTGAAGCATTTAAAGGTAGAAAATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAG  2958

Query 2203  AAACTGAACATGGATCAGGTACTAGACCAGATACTAAGAATGCCACCCGAGAGAAACCGCATCATATACCTACG  2276
            |||||.||.|||||.||||||||||||||.|||||.||.|||||.||.|||||.|||||.|||||.|||||.||
Sbjct 2959  AAACTAAATATGGACCAGGTACTAGACCAAATACTGAGGATGCCTCCGGAGAGGAACCGGATCATCTACCTGCG  3032

Query 2277  CCCAATGCAGCAGGTGGACACTCTAACTTTGGAGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTA  2350
            |||||||||||||||.|||||.||||||.|||||||||||||.||.||.||.||||||||||||||||||||.|
Sbjct 3033  CCCAATGCAGCAGGTAGACACACTAACTCTGGAGCAGAAGCTCTTCAGCGGGCCCTACCCCTATCACATCTGCA  3106

Query 2351  TTATCCATGAATTCAGTAACCCTCCCAATGTCCGGAATAAGGTGCGCATTCGCAGCTGGATGGACACTATAGCA  2424
            |.|||||.||.|||||.||.||||||||.||.|||||.|||||||||||.||||..|||||||||||.|||||.
Sbjct 3107  TCATCCACGAGTTCAGCAATCCTCCCAACGTGCGGAACAAGGTGCGCATCCGCAATTGGATGGACACGATAGCC  3180

Query 2425  AACATCAATCAAGAGCTCATTAAATATGAATTCTTCCCTGAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATA  2498
            ||||||||||||||||||||||||||.||||||||||..|||||||||||.|.||||||.||.||||||||.||
Sbjct 3181  AACATCAATCAAGAGCTCATTAAATACGAATTCTTCCTGGAAGCCACTCGGACTGAAGAGGATTTAAAGAAGTA  3254

Query 2499  CCCCAAGTACCCCTGGGGGAGAGAAATCTATACTTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTT  2572
            |||.|||||.||||||||||||||||||||.||||||||.||||||||.||||||||.||.|||||||||||||
Sbjct 3255  CCCTAAGTATCCCTGGGGGAGAGAAATCTACACTTTAGAGGGTGTTGTAGATGGAGCGCCGTATTCCATGATTT  3328

Query 2573  CTGACTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGAT  2646
            |.|||||||||||||||||||||.|.||..|.|||||||||||||||||.||..||||.||.||||||||.|||
Sbjct 3329  CCGACTTCCCTTGGCTGAGGTCACTGCGGACCGCAGAGCCCAACAGCTTTGCCAGATATGATTTTGAAGATGAT  3402

Query 2647  GAAGAAAGCACTATCTATGCTCCTAGAAGGAAAGGACAGCTGTCTGCAGACATCTGTATGGAAACAATAGGAGA  2720
            |||||.|||||.||||||||||||.||||.|||||.|||.|||||||||||||.||||||||.|||||||||||
Sbjct 3403  GAAGAGAGCACCATCTATGCTCCTCGAAGAAAAGGGCAGTTGTCTGCAGACATTTGTATGGAGACAATAGGAGA  3476

Query 2721  GGAAATTTCAGAGATGCGTCAGATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTG  2794
            |||.||.|||||||||||.||||||||||.|||..||||||||||||||||.||.||||||||||||||.||||
Sbjct 3477  GGAGATCTCAGAGATGCGCCAGATGAAGAGGGGCATATTTCAGCGAGTAGTAGCGATTTTTATCCACTACTGTG  3550

Query 2795  ATGTCAATGGAGAGCCAGTTGAAGATGACTACATT  2829
            |||||||||||||||||||||||||.|||||||||
Sbjct 3551  ATGTCAATGGAGAGCCAGTTGAAGACGACTACATT  3585

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