Nucleotide Global Alignment

Description

• Query: TRCN0000471281
• Subject: XR_386288.3
• Aligned Length: 860
• Identities: 634
• Gaps: 150

Alignment

Query   1  -------------------ATGGCGGAGTATCTGGCCTCCATCTTCGGCACCGAGAAAGACAAAGTCAACTGTT  55
                              ||||||||.||..||||||||||||||||||||||.|||||||||||||||||||
Sbjct   1  CAGAGTCGTCTGCGCGAAAATGGCGGAATACTTGGCCTCCATCTTCGGCACCGAAAAAGACAAAGTCAACTGTT  74

Query  56  CATTTTATTTCAAAATTGGAGCATGTCGTCATGGAGACAGGTGCTCTCGGTTGCACAATAAACCGACGTTTAGC  129
           ||||||||||||||||.||||||||||||||||||||          ||||||||||||||||||||.||||||
Sbjct  75  CATTTTATTTCAAAATCGGAGCATGTCGTCATGGAGA----------CGGTTGCACAATAAACCGACCTTTAGC  138

Query 130  CAGACCATTGCCCTCTTGAACATTTACCGTAACCCTCAAAACTCTTCCCAGTCTGCTGACGGTTTGCGCTGTGC  203
           |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 139  CAGACCATTGCCCTCTTGAACATTTACCGTAACCCTCAAAACTCTTCCCAGTCCGCTGACGGTTTGCGCTGTGC  212

Query 204  CGTGAGCGATGTGGAGATGCAGGAACACTATGATGAGTTTTTTGAGGAGGTTTTTACAGAAATGGAGGAGAAGT  277
           .||||||||.||||||||||||||.||||||||||||||.||||||||.||.||.||.||.|||||.|||||||
Sbjct 213  TGTGAGCGACGTGGAGATGCAGGAGCACTATGATGAGTTCTTTGAGGAAGTCTTCACTGAGATGGAAGAGAAGT  286

Query 278  ATGGGGAAGTAGAGGAGATGAACGTCTGTGACAACCTGGGAGACCACCTGGTGGGGAACGTGTACGTCAAGTTT  351
           |.||||||||.|||||||||||||||||.||||||||.||.|||||||||||||||||||||||.|||||||||
Sbjct 287  ACGGGGAAGTCGAGGAGATGAACGTCTGCGACAACCTAGGGGACCACCTGGTGGGGAACGTGTATGTCAAGTTT  360

Query 352  CGCCGTGAGGAAGATGCGGAAAAGGCTGTGATTGACTTGAATAACCGTTGGTTTAATGGACAGCCGATCCACGC  425
           ||.||||||||.|||||.||.||.||..||||.||||||||||||||||||||||||||||||||||||||.||
Sbjct 361  CGACGTGAGGAGGATGCAGAGAAAGCCATGATCGACTTGAATAACCGTTGGTTTAATGGACAGCCGATCCATGC  434

Query 426  CGAGCTGTCACCCGTGACGGACTTCAGAGAAGCCTGCTGCCGTCAGTATGAGATGGGAGAATGCACACGAGGCG  499
           .||||||||.||.||.||.||||||||.||||||||||||||.||||||||.||||||||.||||||.||||.|
Sbjct 435  AGAGCTGTCCCCAGTAACTGACTTCAGGGAAGCCTGCTGCCGCCAGTATGAAATGGGAGAGTGCACAAGAGGGG  508

Query 500  GCTTCTGCAACTTCATGCATTTGAAGCCCATTTCCAGAGAGCTGCGGCGGGAGCTGTATGGCCGCCGTCGCAAG  573
           |||||||||||||||||||||||||||||||.||.||||||||.||.||||||||||||||.|||||.||||||
Sbjct 509  GCTTCTGCAACTTCATGCATTTGAAGCCCATCTCAAGAGAGCTACGACGGGAGCTGTATGGGCGCCGGCGCAAG  582

Query 574  AAGCATAGATCAAGATCCCGATCCCGGGAGCGTCGTTCTCGGTCTAGAGACCGTGGTCGTGGCGGTGGCGGT--  645
           |||||||||||.||.|||||||||.||||..|.|||||.||..|.|||||||||||.||.||.|||.|.|||  
Sbjct 583  AAGCATAGATCCAGGTCCCGATCCAGGGAATGGCGTTCCCGAGCCAGAGACCGTGGGCGCGGTGGTAGAGGTAG  656

Query 646  -GGCGGTGGTGGAGGTGGCGGCGGACGGGAGCGTGACAGGAGGCGGTCGAGAGATCGTGAAAGATCTGGGCGAT  718
            ||.||.||||||||||||.|.||||||||||||||||||||||..||.|||||..|.||.||||||||.||||
Sbjct 657  AGGTGGAGGTGGAGGTGGCAGAGGACGGGAGCGTGACAGGAGGCAATCAAGAGACTGGGAGAGATCTGGACGAT  730

Query 719  TC------------------------------------------------------------------------  720
           ||                                                                        
Sbjct 731  TCTGAGCCGAGCCCTTTTTACCGTGTGTCTGCTAGACAGTGTTGTAGTTGGTTGACAAGCCAATTCATAATGGG  804

Query 721  ----------------------------------------------  720
                                                         
Sbjct 805  ATTTAAAAAAAAACAAAGATGGTTTCTGAATAAACTTTGTAGTGAT  850