Nucleotide Global Alignment

Description

Query:
TRCN0000471387
Subject:
XM_011515100.2
Aligned Length:
1132
Identities:
899
Gaps:
215

Alignment

Query    1  ATGGAGGCCTTTGCCCTTGGCCCAGCGCGGCGGGGCAGGCGGCGGACCCGGGCCGCCGGCTCCCTGCTCTCTCG  74
            |||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAGGCCTTCGCCCTTGGCCCAGCGCGGCGGGGCAGGCGGCGGACCCGGGCCGCCGGCTCCCTGCTCTCTCG  74

Query   75  GGCCGCCATCCTCCTCTTTATCTCCGCCTTCCTGGTGCGGGTGCCCTCATCAGTTGGACACTTGGTTCGATTAC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCCGCCATCCTCCTCTTTATCTCCGCCTTCCTGGTGCGGGTGCCCTCATCAGTTGGACACTTGGTTCGATTAC  148

Query  149  CAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAATAGTGGGATCAACAAGTTTTCCAGTGAAAGCGTATGTC  222
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
Sbjct  149  CAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAATAGTGGGATCAACAAGTTTTC-----------------  205

Query  223  ATGCTCCATCAAAAGAGTCCACACGTGTTATGTGTAACGCAACAACTGCGAAATGCTGAACTGATAGACCCATC  296
                                                                                      
Sbjct  206  --------------------------------------------------------------------------  205

Query  297  ATTCCAATGGTATGGGCCTAAAGGAAAAGTTGTTTCAGTAGAAAACCGCACTGCACAAATAACATCCACAGGAA  370
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  206  -----------------------------------CAGTAGAAAACCGCACTGCACAAATAACATCCACAGGAA  244

Query  371  GCCTTGTATTCCAAAATTTTGAGGAGAGTATGAGTGGAATTTATACATGTTTCCTCGAATATAAACCTACTGTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  245  GCCTTGTATTCCAAAATTTTGAGGAGAGTATGAGTGGAATTTATACATGTTTCCTCGAATATAAACCTACTGTG  318

Query  445  GAAGAAATTGTTAAACGTCTTCAACTAAAATATGCTATATATGCTTATCGTGAGCCTCATTATTATTATCAGTT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  319  GAAGAAATTGTTAAACGTCTTCAACTAAAATATGCTATATATGCTTATCGTGAGCCTCATTATTATTATCAGTT  392

Query  519  CACAGCTCGATATCATGCAGCTCCCTGCAATAGCATTTATAATATTTCTTTTGAGAAGAAACTTCTTCAGATTT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  393  CACAGCTCGATATCATGCAGCTCCCTGCAATAGCATTTATAATATTTCTTTTGAGAAGAAACTTCTTCAGATTT  466

Query  593  TAAGCAAACTGCTTCTTGACCTTTCATGTGAAATTTCCTTACTTAAGTCTGAATGCCATCGCGTTAAAATGCAA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  467  TAAGCAAACTGCTTCTTGACCTTTCATGTGAAATTTCCTTACTTAAGTCTGAATGCCATCGCGTTAAAATGCAA  540

Query  667  AGAGCTGGTTTGCAAAATGAATTGTTCTTTGCATTTTCAGTTTCATCTCTAGACACTGAAAAAGGACCCAAGCG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  541  AGAGCTGGTTTGCAAAATGAATTGTTCTTTGCATTTTCAGTTTCATCTCTAGACACTGAAAAAGGACCCAAGCG  614

Query  741  ATGTACAGACCATAACTGTGAACCTTACAAAAGACTTTTTAAGGCTAAAAATCTCATAGAGAGATTTTTTAATC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  615  ATGTACAGACCATAACTGTGAACCTTACAAAAGACTTTTTAAGGCTAAAAATCTCATAGAGAGATTTTTTAATC  688

Query  815  AACAAGTAGAAATTCTTGGCAGACGTGCAGAACAATTACCTCAAATATACTATATTGAAGGTACTCTCCAAATG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  689  AACAAGTAGAAATTCTTGGCAGACGTGCAGAACAATTACCTCAAATATACTATATTGAAGGTACTCTCCAAATG  762

Query  889  GTTTGGATTAATCGCTGCTTTCCAGGATATGGAATGAATGTCCAGCAACATCCAAAATGTCCTGAGTGCTGTG-  961
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  763  GTTTGGATTAATCGCTGCTTTCCAGGATATGGAATGAATGTCCAGCAACATCCAAAATGTCCTGAGTGCTGTGT  836

Query  962  -----------------TGATCT----------------------GCAGCCCTGGATCAT-------ATAACCC  989
                             ||||.|                      .|||||     |.||       .|||.||
Sbjct  837  AGTTGGGACTTCCACTATGATGTTGAAAGGAAATGAAGAAAGGAGACAGCC-----TTATTTTGTTCCTAATCC  905

Query  990  CCGTGATGGAA---TTCA--TTGC----------CTTCAAT-----GCAATAGCAG-----CCTGGTG------  1032
            ..|||  ||||   ||||  ||.|          |||||||     | |.||.|||     ||| |||      
Sbjct  906  TGGTG--GGAAAGCTTCAAGTTTCTCAACAGTCTCTTCAATTTGGAG-AGTAACAGTTTGTCCT-GTGACCTCT  975

Query 1033  TATGGAGCAAAAACGAGCTTA-  1053
            .|.|||.|.||.|.||| ||. 
Sbjct  976  GAGGGATCCAAGAAGAG-TTGT  996

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