Nucleotide Global Alignment

Description

• Query: TRCN0000471611
• Subject: NM_001009981.2
• Aligned Length: 947
• Identities: 482
• Gaps: 400

Alignment

Query   1  ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAACT  74
           |||||||||||||||||...|||||||||.||||||||||||||.||||||.|||||||||..|..|||||.||
Sbjct   1  ATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAGTGGTGGCGATCGGCGCCGCTAAGCT  74

Query  75  GGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACAA  148
           .||||||||..|.||.|||||.||||||||||||||||||||.||||||||.|||||||||||.||.|||||.|
Sbjct  75  CGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACTGTGTCCTACATTGCCGTCGCAACGA  148

Query 149  TATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCTT  222
           |||||||.|||||||||||.|||||.|||||.||||||||||||||.||..|||||||.||.|.||||||||||
Sbjct 149  TATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGCACTGGTGCACCTGAGACTGCATCTT  222

Query 223  TTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACACC  296
           ||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|||||||||||.||||||.|||||.|
Sbjct 223  TTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCTTTCTTCAGCTCTTATCAGTCACATC  296

Query 297  CATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATTT  370
           |||||||||.|||||||||||||||.||||||||||||||||||||||.||.||||||||||||||.|||||||
Sbjct 297  CATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCACCCCCTGTGTCTTCTGCCGTGATTT  370

Query 371  TAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCATCGTT  444
           ||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||.|||
Sbjct 371  TAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGCATTTGGAAGTTTTTTGGGCATTGTT  444

Query 445  ATAACACCCCTGCTCCTGCTGCTTTT--TC--------------------------------------------  472
           .|.||.||..||||||||||||||||  ||                                            
Sbjct 445  GTGACTCCGGTGCTCCTGCTGCTTTTCATCGTCCGACGCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACC  518

Query 473  --TTGGT----------------------------TCATCT------TCTTCTGTG---CCTT-TC--------  498
             |||||                            ||||||      .||||||||   |||| ||        
Sbjct 519  ATTTGGTGTGGTCAGCAGTAGCGTGCTACTCATGATCATCTACACCACCTTCTGTGACACCTTCTCCAACCCAA  592

Query 499  ACATC----------------------------TATTTTT--------TCTC----------AGCTT----TTT  522
           |||||                            ||.|.||        ||||          |||||    .||
Sbjct 593  ACATCGACCTGGACAAGTTCAGCCTCATCCTCATACTGTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTT  666

Query 523  ATGACTGTTGTGGTTCCTCTCATCATTGGACA-GGAA-------------------------------------  558
           .|||||       |||.|||..||    .||| ||||                                     
Sbjct 667  CTGACT-------TTCATCTTCTC----CACACGGAATAACTCGGGGTTCACACCAGCAGACACAGTGGCTATC  729

Query 559  --------------------------------------------------------------------------  558
                                                                                     
Sbjct 730  ATCTTCTGCTCCACACACAAGTCCCTCACCTTGGGAATCCCAATGCTGAAGATAGTGTTTGCAGGCCATGAGCA  803

Query 559  --------------------------------------------------------------------------  558
                                                                                     
Sbjct 804  TCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTCAGATTCTCCTGGGAAGTGTGTTAGTGCCAA  877

Query 559  -----------------------------------------------------------  558
                                                                      
Sbjct 878  CAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTG  936