Nucleotide Global Alignment

Description

Query:
TRCN0000471611
Subject:
NM_001282108.1
Aligned Length:
896
Identities:
488
Gaps:
340

Alignment

Query   1  ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAACT  74
           |||||||||||||||||...|||||||||.||||||||||||||.||||||.|||||||||..|..|||||.||
Sbjct   1  ATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAGTGGTGGCGATCGGCGCCGCTAAGCT  74

Query  75  GGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACAA  148
           .||||||||..|.||.|||||.||||||||||||||||||||.||||||||.|||||||||||.||.|||||.|
Sbjct  75  CGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACTGTGTCCTACATTGCCGTCGCAACGA  148

Query 149  TATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCTT  222
           |||||||.|||||||||||.|||||.|||||.||||||||||||||.||..|||||||.||.|.||||||||||
Sbjct 149  TATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGCACTGGTGCACCTGAGACTGCATCTT  222

Query 223  TTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACACC  296
           ||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|||||||||||.||||||.|||||.|
Sbjct 223  TTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCTTTCTTCAGCTCTTATCAGTCACATC  296

Query 297  CATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATTT  370
           |||||||||.|||||||||||||||.||||||||||||||||||||||.||.||||||||||||||.|||||||
Sbjct 297  CATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCACCCCCTGTGTCTTCTGCCGTGATTT  370

Query 371  TAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCATCGTT  444
           ||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||.|||
Sbjct 371  TAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGCATTTGGAAGTTTTTTGGGCATTGTT  444

Query 445  ATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTCAGCT  518
           .|.||.||..||||||||||||||||.||.||||||||.|||||.||||||||.|||||.|||||.||||||||
Sbjct 445  GTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCTTCGGTGCCTTTTACATCCATTTTCTCTCAGCT  518

Query 519  TTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGGAA----------------------------------  558
           .||||||||.||.|||||||||||..|||||||||||  |                                  
Sbjct 519  GTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAG--ATCGTCCGACGCTACATCAAGGACTGGCTGGAGAG  590

Query 559  --------------------------------------------------------------------------  558
                                                                                     
Sbjct 591  GAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCATGATCATCTACACCACCTTCTGTGACACCT  664

Query 559  --------------------------------------------------------------------------  558
                                                                                     
Sbjct 665  TCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCATACTGTTCATAAGAATCCCAATGCTGAAG  738

Query 559  --------------------------------------------------------------------------  558
                                                                                     
Sbjct 739  ATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTCAGATTCT  812

Query 559  --------------------------------------------------------------------------  558
                                                                                     
Sbjct 813  CCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAAGGC  886

Query 559  --------  558
                   
Sbjct 887  CGACAGTG  894