Nucleotide Global Alignment
Description
- Query:
- TRCN0000471611
- Subject:
- NR_104094.1
- Aligned Length:
- 3572
- Identities:
- 414
- Gaps:
- 3099
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA 222
Query 1 -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG 49
|||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct 223 ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG 296
Query 50 TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT 123
||.|||||||||..|..|||||.||.||||||||..|.||.|||||.|||
Sbjct 297 TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGG------------------------ 346
Query 124 GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC 197
||||||||||||.||
Sbjct 347 -----------------------------------------------------------GGAGCTGACCAGCGC 361
Query 198 TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT 271
..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct 362 ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT 435
Query 272 TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT 345
||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct 436 TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA 509
Query 346 CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC 419
||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 510 CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC 583
Query 420 CTTTGGAAGTTTTTTGGGCATCGTTATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGC 493
.||||||||||||||||||||.|||.|.||.||..||||||||||||||||.||.||||||||.|||||.||||
Sbjct 584 ATTTGGAAGTTTTTTGGGCATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCTTCGGTGC 657
Query 494 CTTTCACATCTATTTTTTCTCAGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGGAA--------- 558
||||.|||||.|||||.||||||||.||||||||.||.|||||||||||..||||||||||| |
Sbjct 658 CTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAG--ATCGTCCGAC 729
Query 559 -------------------------------------------------------------------------- 558
Sbjct 730 GCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCATGATC 803
Query 559 -------------------------------------------------------------------------- 558
Sbjct 804 ATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCATACT 877
Query 559 -------------------------------------------------------------------------- 558
Sbjct 878 GTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATCCCAATGCTG 951
Query 559 -------------------------------------------------------------------------- 558
Sbjct 952 AAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTCAGAT 1025
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1026 TCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAA 1099
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1100 GGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACATATATGTACAGGCTGTACATACAGGG 1173
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1174 GTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATTTTTTTACAGAAAAAAATATGATATAC 1247
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1248 CTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAACACACTCTGTTGGCTACTGCCAAGGG 1321
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1322 TAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAGTTCTAGTAAGGGACAAAAGCTAACAC 1395
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1396 GTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATAACGTTCAAAATGAGGTCATGCCATCC 1469
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1470 AGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCACCGCACACTTTGATTCACCGAGTGGTT 1543
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1544 CTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGGGATGCAGATCGCAGAGATGCCGAGAA 1617
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1618 GCGTCAGGTACCTCATTCCTTGACACCGTCTTCTTCCATCCATCCCCGCACACTCCAGAAACACTTCAGTCCCA 1691
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1692 GCACAGAGTGTGTGTGGGGGCTGGGGGGGGGGGGGGGAGTGCAGCTTAGATGTATTATCGGCTGCTTCAGAGAA 1765
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1766 AGTCCTGGTGAGTGTTGCCGTGAACTCGGACAGTGCTTTGGGACGTCTGCAATCGTACCTCAGTATGCTTCTCC 1839
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1840 CTTCCATCATTCCTTAGTTTCCCATTTTACTTACACACAACATCCCCGTGCAACACCCAAATGTCACAGTCAGC 1913
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1914 TGGAGAGTCACAGAAATCAACAGTGGATTATGTGTTCACATTCCACAGCTGGTTCCAAGCACATTCCTGTTACA 1987
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1988 CTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTACATTAAGCGCACTTGAGACATCTGAGAAGATTTA 2061
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2062 TGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATCAAATCCTATCGCCTTAGGAGCCAGAGAAAATAA 2135
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2136 ACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACACTGCTAGTCAGGTGGAAGAAGGGCTGGTCCAGAA 2209
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2210 GAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGATGAGTCCGGGAACTGGGCACCAGCTTTGGAAAGG 2283
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2284 ACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAAGCAGCATACTGAACAGTGGTGGGAGCGTCTTTC 2357
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2358 CTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCTCCCCAGCAGCTGCCTTTGCTGTTGGTAGTGGGG 2431
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2432 GCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGGGCTTTTCAGTGGTGTTGGGTTATGTTATGGTTA 2505
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2506 GCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTACCGTGGTTGGCGCTGGTGTTATGGTGTTAGCACC 2579
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2580 AGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAGCATAGCTATAACACTGGTGTCAGGCCTGGCAGA 2653
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2654 GATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGAGGAGGCAGTGAGTCTGTTTGGTGAGTGTGCTGC 2727
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2728 CTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGCCTTGGGGCTTTAGAGGAAGTAGACACTGTCTGC 2801
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2802 CTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACACTGGTTTCCCCGCCGACCACATCTACCTCTCTGT 2875
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2876 GCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAACTTTTTCTCTTTTGCTTTAAAACTGTCTTTTGTT 2949
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2950 TTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTTAGTAACATGTCTGTGGCTACTTCTCCTTTTACA 3023
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3024 CAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAAAATCAAAATTTGCTTTAATTTATGCTCATTAGG 3097
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3098 ATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACTGCCAATGTCTGTTTTATGTATTTGTTTGTCCAA 3171
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3172 ATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACTCATTCCAACCTGGAATTGGTTTTAAACGGCTGG 3245
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3246 AACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAAACGTTAAGGTTCTGTGGATTTTTTAAATTCTTC 3319
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3320 CCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCAGTGTTTATGCTAAAAACCAAATTTTTTCAAAGA 3393
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3394 GATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAAAATTTAAAAAAAAAATTCTATGATTAAACAGAG 3467
Query 559 -------------------- 558
Sbjct 3468 AGTACTTGACGAATCTCTGG 3487
