Nucleotide Global Alignment

Description

Query:
TRCN0000471611
Subject:
XM_006531488.1
Aligned Length:
1022
Identities:
451
Gaps:
505

Alignment

Query    1  ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAACT  74
            |||||||||||||||||...|||||||||.||||||||||||||.||||||.|||||||||..|..|||||.||
Sbjct    1  ATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAGTGGTGGCGATCGGCGCCGCTAAGCT  74

Query   75  GGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACAA  148
            .||||||||..|.||.|||||.||||||||||||||||||||.||||||||.|||||||||||.||.|||||.|
Sbjct   75  CGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACTGTGTCCTACATTGCCGTCGCAACGA  148

Query  149  TATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCTT  222
            |||||||.|||||||||||.|||||.|||||.||||||||||||||.||..|||||||.||.|.||||||||||
Sbjct  149  TATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGCACTGGTGCACCTGAGACTGCATCTT  222

Query  223  TTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACACC  296
            ||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|||||||||||.||||||.|||||.|
Sbjct  223  TTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCTTTCTTCAGCTCTTATCAGTCACATC  296

Query  297  CATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATTT  370
            |||||||||.|||||||||||||||.||||||||||||||||||||||.||.||||||||||||||.|||||||
Sbjct  297  CATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCACCCCCTGTGTCTTCTGCCGTGATTT  370

Query  371  TAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCATCGTT  444
            |||||||||||||||||||||||||                                       ||||||.|||
Sbjct  371  TAACCAAGGCAGTTGGTGGAAATGA---------------------------------------GGGCATTGTT  405

Query  445  ATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTCAGCT  518
            .|.||.||..||||||||||||||||.||.||||||||.|||||.||||||||.|||||.|||||.||||||||
Sbjct  406  GTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCTTCGGTGCCTTTTACATCCATTTTCTCTCAGCT  479

Query  519  TTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGGAA----------------------------------  558
            .||||||||.||.|||||||||||..|||||||||||  |                                  
Sbjct  480  GTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAG--ATCGTCCGACGCTACATCAAGGACTGGCTGGAGAG  551

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  552  GAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCATGATCATCTACACCACCTTCTGTGACACCT  625

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  626  TCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCATACTGTTCATAATAGTCTCCGTTCAGCTG  699

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  700  AGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATAACTCGGGGTTCACACCAGCAGACACAGTGGCTAT  773

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  774  CATCTTCTGCTCCACACACAAGTCCCTCACCTTGGGAATCCCAATGCTGAAGATAGTGTTTGCAGGCCATGAGC  847

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  848  ATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTCAGATTCTCCTGGGAAGTGTGTTAGTGCCA  921

Query  559  ------------------------------------------------------------  558
                                                                        
Sbjct  922  ACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTG  981