Nucleotide Global Alignment
Description
- Query:
- TRCN0000471611
- Subject:
- XR_387783.1
- Aligned Length:
- 3302
- Identities:
- 488
- Gaps:
- 2746
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA 222
Query 1 -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG 49
|||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct 223 ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG 296
Query 50 TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT 123
||.|||||||||..|..|||||.||.||||||||..|.||.|||||.||||||||||||||||||||.||||||
Sbjct 297 TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACT 370
Query 124 GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC 197
||.|||||||||||.||.|||||.||||||||.|||||||||||.|||||.|||||.||||||||||||||.||
Sbjct 371 GTGTCCTACATTGCCGTCGCAACGATATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGC 444
Query 198 TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT 271
..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct 445 ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT 518
Query 272 TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT 345
||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct 519 TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA 592
Query 346 CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC 419
||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 593 CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC 666
Query 420 CTTTGGAAGTTTTTTGGGCATCGTTATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGC 493
.||||||||||||||||||||.|||.|.||.||..||||||||||||||||.||.||||||||.|||||.||||
Sbjct 667 ATTTGGAAGTTTTTTGGGCATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCTTCGGTGC 740
Query 494 CTTTCACATCTATTTTTTCTCAGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGGAA--------- 558
||||.|||||.|||||.||||||||.||||||||.||.|||||||||||..||||||||||| |
Sbjct 741 CTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAG--ATCGTCCGAC 812
Query 559 -------------------------------------------------------------------------- 558
Sbjct 813 GCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCATGATC 886
Query 559 -------------------------------------------------------------------------- 558
Sbjct 887 ATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCATACT 960
Query 559 -------------------------------------------------------------------------- 558
Sbjct 961 GTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATAACTCGGGGT 1034
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1035 TCACACCAGCAGACACAGTGGCTATCATCTTCTGCTCCACACACAAGTCCCTCACCTTGGGAATCCCAATGCTG 1108
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1109 AAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTCAGAT 1182
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1183 TCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAA 1256
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1257 GGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACATATATGTACAGGCTGTACATACAGGG 1330
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1331 GTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATTTTTTTACAGAAAAAAATATGATATAC 1404
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1405 CTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAACACACTCTGTTGGCTACTGCCAAGGG 1478
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1479 TAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAGTTCTAGTAAGGGACAAAAGCTAACAC 1552
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1553 GTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATAACGTTCAAAATGAGGTCATGCCATCC 1626
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1627 AGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCACCGCACACTTTGATTCACCGAGTGGTT 1700
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1701 CTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGGGATGCAGATCGCAGAGATGCCGAGAA 1774
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1775 GCGTCAGCTGGTTCCAAGCACATTCCTGTTACACTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTAC 1848
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1849 ATTAAGCGCACTTGAGACATCTGAGAAGATTTATGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATC 1922
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1923 AAATCCTATCGCCTTAGGAGCCAGAGAAAATAAACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACAC 1996
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1997 TGCTAGTCAGGTGGAAGAAGGGCTGGTCCAGAAGAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGAT 2070
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2071 GAGTCCGGGAACTGGGCACCAGCTTTGGAAAGGACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAA 2144
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2145 GCAGCATACTGAACAGTGGTGGGAGCGTCTTTCCTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCT 2218
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2219 CCCCAGCAGCTGCCTTTGCTGTTGGTAGTGGGGGCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGG 2292
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2293 GCTTTTCAGTGGTGTTGGGTTATGTTATGGTTAGCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTAC 2366
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2367 CGTGGTTGGCGCTGGTGTTATGGTGTTAGCACCAGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAG 2440
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2441 CATAGCTATAACACTGGTGTCAGGCCTGGCAGAGATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGA 2514
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2515 GGAGGCAGTGAGTCTGTTTGGTGAGTGTGCTGCCTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGC 2588
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2589 CTTGGGGCTTTAGAGGAAGTAGACACTGTCTGCCTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACAC 2662
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2663 TGGTTTCCCCGCCGACCACATCTACCTCTCTGTGCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAAC 2736
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2737 TTTTTCTCTTTTGCTTTAAAACTGTCTTTTGTTTTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTT 2810
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2811 AGTAACATGTCTGTGGCTACTTCTCCTTTTACACAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAA 2884
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2885 AATCAAAATTTGCTTTAATTTATGCTCATTAGGATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACT 2958
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2959 GCCAATGTCTGTTTTATGTATTTGTTTGTCCAAATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACT 3032
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3033 CATTCCAACCTGGAATTGGTTTTAAACGGCTGGAACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAA 3106
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3107 ACGTTAAGGTTCTGTGGATTTTTTAAATTCTTCCCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCA 3180
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3181 GTGTTTATGCTAAAAACCAAATTTTTTCAAAGAGATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAA 3254
Query 559 ---------------------------------------------- 558
Sbjct 3255 AATTTAAAAAAAAAATTCTATGATTAAACAGAGAGTACTTGACGAA 3300
