Nucleotide Global Alignment
Description
- Query:
- TRCN0000471611
- Subject:
- XR_387785.1
- Aligned Length:
- 3711
- Identities:
- 489
- Gaps:
- 3154
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA 222
Query 1 -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG 49
|||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct 223 ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG 296
Query 50 TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT 123
||.|||||||||..|..|||||.||.||||||||..|.||.|||||.||||||||||||||||||||.||||||
Sbjct 297 TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACT 370
Query 124 GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC 197
||.|||||||||||.||.|||||.||||||||.|||||||||||.|||||.|||||.||||||||||||||.||
Sbjct 371 GTGTCCTACATTGCCGTCGCAACGATATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGC 444
Query 198 TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT 271
..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct 445 ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT 518
Query 272 TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT 345
||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct 519 TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA 592
Query 346 CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC 419
||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 593 CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC 666
Query 420 CTTTGGAAGTTTTTTGGGCATCGTTATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGC 493
.||||||||||||||||||||.|||.|.||.||..||||||||||||||||.||.||||||||.|||||.||||
Sbjct 667 ATTTGGAAGTTTTTTGGGCATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCTTCGGTGC 740
Query 494 CTTTCACATCTATTTTTTCTCAGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGGAA--------- 558
||||.|||||.|||||.||||||||.||||||||.||.|||||||||||..|||||||||| |||
Sbjct 741 CTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACA-GAATCACTTTGT 813
Query 559 -------------------------------------------------------------------------- 558
Sbjct 814 GATGCCCAATTCCACTTCCTACATCTCAGCGAAGAGGCGACCTGTTGATCTCTGTGTTTCAGATCGTCCGACGC 887
Query 559 -------------------------------------------------------------------------- 558
Sbjct 888 TACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCATGATCAT 961
Query 559 -------------------------------------------------------------------------- 558
Sbjct 962 CTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCATACTGT 1035
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1036 TCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATAACTCGGGGTTC 1109
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1110 ACACCAGCAGACACAGTGGCTATCATCTTCTGCTCCACACACAAGTCCCTCACCTTGGGAATCCCAATGCTGAA 1183
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1184 GATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTCAGATTC 1257
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1258 TCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAAGG 1331
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1332 CCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACATATATGTACAGGCTGTACATACAGGGGT 1405
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1406 TCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATTTTTTTACAGAAAAAAATATGATATACCT 1479
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1480 GTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAACACACTCTGTTGGCTACTGCCAAGGGTA 1553
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1554 GTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAGTTCTAGTAAGGGACAAAAGCTAACACGT 1627
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1628 TTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATAACGTTCAAAATGAGGTCATGCCATCCAG 1701
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1702 AAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCACCGCACACTTTGATTCACCGAGTGGTTCT 1775
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1776 TTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGGGATGCAGATCGCAGAGATGCCGAGAAGC 1849
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1850 GTCAGGTACCTCATTCCTTGACACCGTCTTCTTCCATCCATCCCCGCACACTCCAGAAACACTTCAGTCCCAGC 1923
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1924 ACAGAGTGTGTGTGGGGGCTGGGGGGGGGGGGGGGAGTGCAGCTTAGATGTATTATCGGCTGCTTCAGAGAAAG 1997
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1998 TCCTGGTGAGTGTTGCCGTGAACTCGGACAGTGCTTTGGGACGTCTGCAATCGTACCTCAGTATGCTTCTCCCT 2071
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2072 TCCATCATTCCTTAGTTTCCCATTTTACTTACACACAACATCCCCGTGCAACACCCAAATGTCACAGTCAGCTG 2145
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2146 GAGAGTCACAGAAATCAACAGTGGATTATGTGTTCACATTCCACAGCTGGTTCCAAGCACATTCCTGTTACACT 2219
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2220 GTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTACATTAAGCGCACTTGAGACATCTGAGAAGATTTATG 2293
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2294 AATCATTTGACAGATGTTCACAACATCTCTTAAGAAATCAAATCCTATCGCCTTAGGAGCCAGAGAAAATAAAC 2367
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2368 ATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACACTGCTAGTCAGGTGGAAGAAGGGCTGGTCCAGAAGA 2441
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2442 GCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGATGAGTCCGGGAACTGGGCACCAGCTTTGGAAAGGAC 2515
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2516 TCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAAGCAGCATACTGAACAGTGGTGGGAGCGTCTTTCCT 2589
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2590 GAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCTCCCCAGCAGCTGCCTTTGCTGTTGGTAGTGGGGGC 2663
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2664 TGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGGGCTTTTCAGTGGTGTTGGGTTATGTTATGGTTAGC 2737
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2738 ATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTACCGTGGTTGGCGCTGGTGTTATGGTGTTAGCACCAG 2811
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2812 GTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAGCATAGCTATAACACTGGTGTCAGGCCTGGCAGAGA 2885
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2886 TCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGAGGAGGCAGTGAGTCTGTTTGGTGAGTGTGCTGCCT 2959
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2960 CCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGCCTTGGGGCTTTAGAGGAAGTAGACACTGTCTGCCT 3033
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3034 GCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACACTGGTTTCCCCGCCGACCACATCTACCTCTCTGTGC 3107
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3108 GTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAACTTTTTCTCTTTTGCTTTAAAACTGTCTTTTGTTTT 3181
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3182 CAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTTAGTAACATGTCTGTGGCTACTTCTCCTTTTACACA 3255
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3256 AATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAAAATCAAAATTTGCTTTAATTTATGCTCATTAGGAT 3329
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3330 TGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACTGCCAATGTCTGTTTTATGTATTTGTTTGTCCAAAT 3403
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3404 GTACCTATAAAAAGAATACATTAGACAGTTATGTTTACTCATTCCAACCTGGAATTGGTTTTAAACGGCTGGAA 3477
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3478 CTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAAACGTTAAGGTTCTGTGGATTTTTTAAATTCTTCCC 3551
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3552 TATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCAGTGTTTATGCTAAAAACCAAATTTTTTCAAAGAGA 3625
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3626 TGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAAAATTTAAAAAAAAAATTCTATGATTAAACAGAGAG 3699
Query 559 ----------- 558
Sbjct 3700 TACTTGACGAA 3710
