Nucleotide Global Alignment
Description
- Query:
- TRCN0000471611
- Subject:
- XR_878921.1
- Aligned Length:
- 3739
- Identities:
- 488
- Gaps:
- 3183
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA 222
Query 1 -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG 49
|||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct 223 ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG 296
Query 50 TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT 123
||.|||||||||..|..|||||.||.||||||||..|.||.|||||.||||||||||||||||||||.||||||
Sbjct 297 TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACT 370
Query 124 GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC 197
||.|||||||||||.||.|||||.||||||||.|||||||||||.|||||.|||||.||||||||||||||.||
Sbjct 371 GTGTCCTACATTGCCGTCGCAACGATATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGC 444
Query 198 TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT 271
..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct 445 ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT 518
Query 272 TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT 345
||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct 519 TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA 592
Query 346 CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC 419
||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 593 CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC 666
Query 420 CTTTGGAAGTTTTTT----------------------------------------------------------- 434
.||||||||||||||
Sbjct 667 ATTTGGAAGTTTTTTGGTAATTATAGACAAGATGGGTTTTTGTTTTGAAGCTCAAGATGACCTTAAACTTCTGC 740
Query 435 -----------------------------------------GGGCATCGTTATAACACCCCTGCTCCTGCTGCT 467
||||||.|||.|.||.||..|||||||||||||
Sbjct 741 TTCTAACCCTTTACCTGCGTATCCCATGTGCTGGAACTACAGGGCATTGTTGTGACTCCGGTGCTCCTGCTGCT 814
Query 468 TTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTCAGCTTTTTATGACTGTTGTGGTTCCTC 541
|||.||.||||||||.|||||.||||||||.|||||.|||||.||||||||.||||||||.||.||||||||||
Sbjct 815 TTTCCTCGGTTCATCCTCTTCGGTGCCTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTC 888
Query 542 TCATCATTGGACAGGAA--------------------------------------------------------- 558
|..||||||||||| |
Sbjct 889 TTGTCATTGGACAG--ATCGTCCGACGCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGG 960
Query 559 -------------------------------------------------------------------------- 558
Sbjct 961 TCAGCAGTAGCGTGCTACTCATGATCATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTG 1034
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1035 GACAAGTTCAGCCTCATCCTCATACTGTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCAT 1108
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1109 CTTCTCCACACGGAATAACTCGGGGTTCACACCAGCAGACACAGTGGCTATCATCTTCTGCTCCACACACAAGT 1182
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1183 CCCTCACCTTGGGAATCCCAATGCTGAAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCC 1256
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1257 TTGCTCATCTACCACCCAGCTCAGATTCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTC 1330
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1331 CAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACA 1404
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1405 TATATGTACAGGCTGTACATACAGGGGTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATT 1478
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1479 TTTTTACAGAAAAAAATATGATATACCTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAA 1552
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1553 CACACTCTGTTGGCTACTGCCAAGGGTAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAG 1626
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1627 TTCTAGTAAGGGACAAAAGCTAACACGTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATA 1700
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1701 ACGTTCAAAATGAGGTCATGCCATCCAGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCAC 1774
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1775 CGCACACTTTGATTCACCGAGTGGTTCTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGG 1848
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1849 GATGCAGATCGCAGAGATGCCGAGAAGCGTCAGGTACCTCATTCCTTGACACCGTCTTCTTCCATCCATCCCCG 1922
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1923 CACACTCCAGAAACACTTCAGTCCCAGCACAGAGTGTGTGTGGGGGCTGGGGGGGGGGGGGGGAGTGCAGCTTA 1996
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1997 GATGTATTATCGGCTGCTTCAGAGAAAGTCCTGGTGAGTGTTGCCGTGAACTCGGACAGTGCTTTGGGACGTCT 2070
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2071 GCAATCGTACCTCAGTATGCTTCTCCCTTCCATCATTCCTTAGTTTCCCATTTTACTTACACACAACATCCCCG 2144
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2145 TGCAACACCCAAATGTCACAGTCAGCTGGAGAGTCACAGAAATCAACAGTGGATTATGTGTTCACATTCCACAG 2218
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2219 CTGGTTCCAAGCACATTCCTGTTACACTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTACATTAAGC 2292
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2293 GCACTTGAGACATCTGAGAAGATTTATGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATCAAATCCT 2366
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2367 ATCGCCTTAGGAGCCAGAGAAAATAAACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACACTGCTAGT 2440
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2441 CAGGTGGAAGAAGGGCTGGTCCAGAAGAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGATGAGTCCG 2514
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2515 GGAACTGGGCACCAGCTTTGGAAAGGACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAAGCAGCAT 2588
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2589 ACTGAACAGTGGTGGGAGCGTCTTTCCTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCTCCCCAGC 2662
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2663 AGCTGCCTTTGCTGTTGGTAGTGGGGGCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGGGCTTTTC 2736
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2737 AGTGGTGTTGGGTTATGTTATGGTTAGCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTACCGTGGTT 2810
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2811 GGCGCTGGTGTTATGGTGTTAGCACCAGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAGCATAGCT 2884
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2885 ATAACACTGGTGTCAGGCCTGGCAGAGATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGAGGAGGCA 2958
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2959 GTGAGTCTGTTTGGTGAGTGTGCTGCCTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGCCTTGGGG 3032
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3033 CTTTAGAGGAAGTAGACACTGTCTGCCTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACACTGGTTTC 3106
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3107 CCCGCCGACCACATCTACCTCTCTGTGCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAACTTTTTCT 3180
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3181 CTTTTGCTTTAAAACTGTCTTTTGTTTTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTTAGTAACA 3254
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3255 TGTCTGTGGCTACTTCTCCTTTTACACAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAAAATCAAA 3328
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3329 ATTTGCTTTAATTTATGCTCATTAGGATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACTGCCAATG 3402
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3403 TCTGTTTTATGTATTTGTTTGTCCAAATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACTCATTCCA 3476
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3477 ACCTGGAATTGGTTTTAAACGGCTGGAACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAAACGTTAA 3550
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3551 GGTTCTGTGGATTTTTTAAATTCTTCCCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCAGTGTTTA 3624
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3625 TGCTAAAAACCAAATTTTTTCAAAGAGATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAAAATTTAA 3698
Query 559 --------------------------------------- 558
Sbjct 3699 AAAAAAAATTCTATGATTAAACAGAGAGTACTTGACGAA 3737
