Nucleotide Global Alignment

Description

Query:
TRCN0000471618
Subject:
NM_001291459.2
Aligned Length:
1648
Identities:
995
Gaps:
611

Alignment

Query    1  ATGGACGTGGTAGAGGTCGTGGGTAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG  74
            |||||||||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGACGTGGTAGAGGTCGCGGGCAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG  74

Query   75  ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTGGAAGCTACAACAACAACATCGATCACTTTG  148
            |||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||.||.|
Sbjct   75  ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG  148

Query  149  GGA-TGCAGCATGAGACGGAGCTGCCTCCTCTGACTGCGCGGGAGGTGAAGCAAATTCGGCGGGAGATCAGCCG  221
            ||| ||.| |||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  149  GGATTGTA-CATGAGACGGAGCTGCCTCCTCTGACTGCGCGGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCG  221

Query  222  AAAGAGCAAGTGGGTGAAAATGCTGGGAGAATGGGACACCTACAAAAACAGCAGAAAGCTCATAGATCGAGCGT  295
            ||||||||||||||||.|.|||||||||||.|||||.|..|||||||.||||||||||||||||||||||||||
Sbjct  222  AAAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAATACAAAAGCAGCAGAAAGCTCATAGATCGAGCGT  295

Query  296  ACCAGGGAATTCCCATGAACATCCGGGGCCCGATGTGGTCAGTCCTCCTGAACATTGAGGAAATCAAGTTGAAA  369
            ||.|||||||.|||||||||||||||||||||||||||||||||||||||||||.|||||||||.|||||||||
Sbjct  296  ACAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTCAGTCCTCCTGAACACTGAGGAAATGAAGTTGAAA  369

Query  370  AACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGAGGTCATCTGAACACATCCAGCAGATGGACCTGGA  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||..||.||||.|||
Sbjct  370  AACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGAGGTCATCTGAGCACATCCAGCGCATCGACCGGGA  443

Query  444  CGTAAGTGGGACATTAAGGAGGCATATATTCTTCAGGGATCGATACGGAACCAAGCAGCGGGAACTACTTTACA  517
            ||||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||..|||
Sbjct  444  CGTAAGCGGGACATTAAGGAAGCATATATTCTTCAGGGATCGATACGGAACCAAGCAGCGGGAACTACTCCACA  517

Query  518  TCCTCCTGGCGTATGAGGAGTATAACCCGGAGGTGGGCTACTGCAGGGACCTGAGCCACATCGCCGCCTTGTTC  591
            ||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  518  TCCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTACTGCAGGGACCTGAGCCACATCGCCGCCTTGTTC  591

Query  592  CTCCTTTATCTTCCTGAGGAGGATGCATTCTGGGCACTGGTGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCA  665
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  592  CTCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGGTGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCA  665

Query  666  GGGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTCCAAGACCAACAGGAGCATGTGGTAGCCACGTCAC  739
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  666  GGGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTCCAAGACCAACAGGAGCATGTGGTAGCCACGTCAC  739

Query  740  TACCCAAGACCATGTGGCATCAGGACAAGAAAGATCTATGTGGGCAGTGTTCGTCCTTAGGCTGCCTCATCCGG  813
            .|||||||||||||.|||||||||||||||||||||||||||||||||||||..|.||||||||||||||||||
Sbjct  740  AACCCAAGACCATGGGGCATCAGGACAAGAAAGATCTATGTGGGCAGTGTTCCCCGTTAGGCTGCCTCATCCGG  813

Query  814  ATATTGATTGATGGGATCTCTCTCGGGCTCACCCTGCGCCTCTGGGACGTGTATCTGGTAGAAGGCGAACAGGC  887
            |||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct  814  ATATTGATTGACGGGATCTCTCTCGGGCTCACCCTGCGCCTGTGGGACGTGTATCTGGTAGAAGGCGAACAGGC  887

Query  888  GTTCATGCTGATAACAA-AATCGCCTTTAAGGTTCAGCAGAAGCGCCTCACGAAGACGTCCAGGTGTGGCCCGT  960
            |||.||||.|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  888  GTTGATGCCGATAACAAGAATCGCCTTTAAGGTTCAGCAGAAGCGCCTCACGAAGACGTCCAGGTGTGGCCCGT  961

Query  961  GGGCACGTTTTTGGAACCGGTTCGTTGATGCCTGGGCCAGGGATGATGACACTGTGCTCAAGCATCTTAGGGCC  1034
            |||||||||||||.|||||||||||||||.||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  962  GGGCACGTTTTTGCAACCGGTTCGTTGATACCTGGGCCAGGGATGAGGACACTGTGCTCAAGCATCTTAGGGCC  1035

Query 1035  TCTA----------------------------------------------------------------------  1038
            ||||                                                                      
Sbjct 1036  TCTATGAAGAAACTAACAAGAAAGCAGGGGGACCTGCAACCCCCAGCCAAACCCGAGCAAGGGTCGTCGGCATC  1109

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 1110  CAGGCCTGTGCCGGCTTCACGTGGCGGGAAGACCCTCTGCAAGGGGGACAGGCAGGCCCCTCCAGGCCCACCAG  1183

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 1184  CCCGGTTCCCGCGGCCCATTTGGTCAGCTTCCCCGCCACGGGCACCTCGTTCTTCCACACCCTGTCCTGGTGGG  1257

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 1258  GCTGTCCGGGAAGACACCTACCCTGTGGGCACTCAGGGTGTGCCCAGCCCGGCCCTGGCTCAGGGAGGACCTCA  1331

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 1332  GGGTTCCTGGAGATTCCTGCAGTGGAACTCCATGCCCCGCCTCCCAACGGACCTGGACGTAGAGGGCCCTTGGT  1405

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 1406  TCCGCCATTATGATTTCAGACAGAGCTGCTGGGTCCGTGCCATATCCCAGGAGGACCAGCTGGCCCCCTGCTGG  1479

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 1480  CAGGCTGAACACCCTGCGGAGCGGGTGAGATCGGCTTTCGCTGCACCCAGCACTGATTCCGACCAGGGCACCCC  1553

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 1554  CTTCAGAGCTAGGGACGAACAGCCGTGTGCTCCCACCTCAGGGCCTTGCCTCTGCGGCCTCCACTTGGAAAGTT  1627

Query 1039  --------------------  1038
                                
Sbjct 1628  CTCAGTTCCCTCCAGGCTTC  1647