Nucleotide Global Alignment
Description
- Query:
- TRCN0000471624
- Subject:
- XM_017009561.2
- Aligned Length:
- 2654
- Identities:
- 1209
- Gaps:
- 1438
Alignment
Query 1 ATGGATAGCACAAAGGAGAAGTGTGACAGTTACAAAGATGATCTTCTGCTTAGGATGGGACTTAATGATAATAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGCAGGAATGGAAGGATTAGATAAAGAGAAAATTAACAAAATTATAATGGAAGCCACGAAGGGGTCCAGATTTT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATGGAAATGAGCTCAAGAAAGAAAAGCAAGTCAACCAACGAATTGAAAATATGATGCAACAAAAAGCTCAAATC 222
||||||||||||||||||||||||
Sbjct 1 --------------------------------------------------ATGATGCAACAAAAAGCTCAAATC 24
Query 223 ACCAGCCAACAGCTAAGAAAAGCACAATTACAGGTTGACAGATTTGCAATGGAATTAGAACAAAGCCGAAATTT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 25 ACCAGCCAACAGCTAAGAAAAGCACAATTACAGGTTGACAGATTTGCAATGGAATTAGAACAAAGCCGAAATTT 98
Query 297 GAGCAATACCATAGTGCACATTGACATGGATGCTTTCTATGCAGCTGTAGAAATGAGGGACAATCCAGAATTGA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 99 GAGCAATACCATAGTGCACATTGACATGGATGCTTTCTATGCAGCTGTAGAAATGAGGGACAATCCAGAATTGA 172
Query 371 AGGATAAACCCATTGCTGTAGGATCAATGAGTATGCTGTCTACTTCAAATTACCATGCAAGGAGATTTGGTGTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 173 AGGATAAACCCATTGCTGTAGGATCAATGAGTATGCTGTCTACTTCAAATTACCATGCAAGGAGATTTGGTGTT 246
Query 445 CGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCCCCCAACTTTGACAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 247 CGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCCCCCAACTTTGACAA 320
Query 519 ATACCGAGCTGTGAGTAAAGAGGTTAAGGAAATACTTGCTGATTATGATCCCAATTTTATGGCCATGAGTCTTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 321 ATACCGAGCTGTGAGTAAAGAGGTTAAGGAAATACTTGCTGATTATGATCCCAATTTTATGGCCATGAGTCTTG 394
Query 593 ATGAAGCCTACTTGAATATAACAAAGCACTTAGAAGAAAGACAAAATTGGCCTGAGGATAAAAGAAGGTATTTC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 395 ATGAAGCCTACTTGAATATAACAAAGCACTTAGAAGAAAGACAAAATTGGCCTGAGGATAAAAGAAGGTATTTC 468
Query 667 ATCAAAATGGGAAGCTCTGTAGAAAAT------------------------------------------GATAA 698
||||||||||||||||||||||||||| |||||
Sbjct 469 ATCAAAATGGGAAGCTCTGTAGAAAATGACCTTCAGAATTTGTATATTCAAAGAAGCATAACTTTCACAGATAA 542
Query 699 TCCAGGAAAGGAAGTTAATAAACTGAGTGAGCATGAACGATCCATCTCTCCACTACTTTTTGAAGAGAGTCCTT 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 TCCAGGAAAGGAAGTTAATAAACTGAGTGAGCATGAACGATCCATCTCTCCACTACTTTTTGAAGAGAGTCCTT 616
Query 773 CTGATGTGCAGCCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGAACAAAACAATCCTCAAATACTCCAAAAC 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 617 CTGATGTGCAGCCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGAACAAAACAATCCTCAAATACTCCAAAAC 690
Query 847 TCAGTTGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGAAATTCGTTTCAGAATTGAGCAGAAAACAACACT 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 691 TCAGTTGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGAAATTCGTTTCAGAATTGAGCAGAAAACAACACT 764
Query 921 GACAGCCAGTGCAGGCATTGCCCCAAATACAATGTTAGCAAAAGTATGCAGTGATAAGAATAAACCAAATGGAC 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 765 GACAGCCAGTGCAGGCATTGCCCCAAATACAATGTTAGCAAAAGTATGCAGTGATAAGAATAAACCAAATGGAC 838
Query 995 AATACCAAATTCTTCCCAATAGACAAGCTGTGATGGACTTCATCAAGGATTTACCCATTAGAAAGGTTTCTGGA 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 AATACCAAATTCTTCCCAATAGACAAGCTGTGATGGACTTCATCAAGGATTTACCCATTAGAAAGGTTTCTGGA 912
Query 1069 ATAGGAAAAGTTACAGAGAAAATGTTAAAGGCCCTTGGAATTATTACATGTACAGAACTTTACCAACAGAGGGC 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 913 ATAGGAAAAGTTACAGAGAAAATGTTAAAGGCCCTTGGAATTATTACATGTACAGAACTTTACCAACAGAGGGC 986
Query 1143 ATTGCTTTCTCTCCTTTTCTCTGAAACATCTTGGCATTATTTCCTTCATATCTCCTTGGGTCTAGGTTCAACAC 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 987 ATTGCTTTCTCTCCTTTTCTCTGAAACATCTTGGCATTATTTCCTTCATATCTCCTTGGGTCTAGGTTCAACAC 1060
Query 1217 ACCTGACGAGGGATGGAGAGAGGAAAAGTATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAG 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1061 ACCTGACGAGGGATGGAGAGAGGAAAAGTATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAG 1134
Query 1291 CAATACAGCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGGATCTACAGAAAGAAAGACTTAAGG------- 1357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 CAATACAGCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGGATCTACAGAAAGAAAGACTTAAGGGTAGAAC 1208
Query 1358 TG----CTTT----------------ATTTTGA--TA-----TGGTG--TCCTTAGTTT------TTAAGTTT- 1395
|| |.|| ||||||| || |.||| ||...||||| || ||||
Sbjct 1209 TGTTACCATTAAGTTGAAGAATGTGAATTTTGAAGTAAAAACTCGTGCATCTACAGTTTCATCTGTT--GTTTC 1280
Query 1396 ----------------TTT-------------AATAG-TAAA-----------ATGCT--------ACCT---- 1416
||| |||.| |||| ||||| ||.|
Sbjct 1281 TACTGCAGAAGAAATATTTGCCATTGCTAAGGAATTGCTAAAAACAGAAATTGATGCTGATTTTCCACATCCCT 1354
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1355 TGAGATTAAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACACCAACAAAGGAGC 1428
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1429 ATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGACAAAGA 1502
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1503 TAAGTTTGTAAAACCTCTAGAAATGTCTCATAAGAAGAGTTTCTTTGATAAAAAACGATCAGAAAGGAAATGGA 1576
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1577 GTCACCAAGATACATTTAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGTTTTA 1650
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1651 AAGAAGAAGATGAATGAGAATTTGGAAATATCAGAGAATTCAGATGACTGTCAGATACTTACCTGTCCTGTTTG 1724
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1725 CTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGATGAATGTCTTGATGGACCTTCAA 1798
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1799 TCAGTGAAAACTTTAAAATGTTCTCGTGTTCACATGTTTCTGCTACCAAAGTTAACAAGAAAGAAAATGTTCCT 1872
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1873 GCTTCTTCACTTTGTGAGAAGCAAGATTATGAAGCCCATCCAAAAATTAAAGAAATATCTTCAGTAGATTGTAT 1946
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1947 AGCTTTAGTAGATACTATAGATAACTCATCTAAAGCAGAAAGCATAGATGCTTTAAGTAATAAGCATAGCAAGG 2020
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2021 AAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAATATTGAACACTGTCATCAGAATTCTTCTTCTACTGTTTCA 2094
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2095 TTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCAGCCTTACTTATGTGAAGTGAAAACAGGCCA 2168
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2169 AGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCCTGTTCAATGTGCATGTGGATG 2242
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2243 TTTGCTTAAATAAAAGTTTTATCCAAGAATTAAGAAAGGATAAATTTAACCCAGTTAATCAACCCAAAGAAAGC 2316
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2317 TCCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAA 2390
Query 1417 ---------------------------------------------------------------- 1416
Sbjct 2391 GTACTCAACATCAAAGAAAATAAAACCAAACAATCCCAAACATACCCTTGATATATTTTTTAAG 2454
