Nucleotide Global Alignment
Description
- Query:
- TRCN0000471650
- Subject:
- XM_017001797.1
- Aligned Length:
- 1872
- Identities:
- 1126
- Gaps:
- 720
Alignment
Query 1 ATGCCCAGCAGGACCGGCCCCAAGATGGAAGGGAGCGGCGGCCGCGTCCGCCTCAAGGCGCATTACGGGGGGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATCTTCATCACCAGCGTGGACGCCGCCACGACCTTCGAGGAGCTCTGTGAGGAAGTGAGAGACATGTGTCGTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGGTGACCCTTGCACGGTGTCCTCCCAGATG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAGCTGGAAGAGGCTTTCCGCCTGGCCCGTCAGTGCAGGGATGAAGGCCTCATCATTCATGTTTTCCCGAGCAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCCTGAGCAGCCTGGCCTGCCATGTCCGGGAGAAGACAAATCTATCTACCGCCGGGGAGCCAGAAGATGGAGGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGCTGTACCGTGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGAGAGCGTACTGCGGTCAGTGCAGC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAGAGGATATGGGGCCTCGCGAGGCAAGGCTACAGGTGCATCAACTGCAAACTGCTGGTCCATAAGCGCTGCCA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CGGCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACA 592
|||||||||||||||||||||||||||||||
Sbjct 1 -------------------------------------------ATGCCTTCCCAAGAGCCTCCAGTAGACGACA 31
Query 593 AGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATGGAATTGCTTACATTTCCTCATCCCGGAAGCATGAC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 32 AGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATGGAATTGCTTACATTTCCTCATCCCGGAAGCATGAC 105
Query 667 AGCATTAAAGACGACTCGGAGGACCTTAAGCCAGTTATCGATGGGATGGATGGAATCAAAATCTCTCAGGGGCT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 106 AGCATTAAAGACGACTCGGAGGACCTTAAGCCAGTTATCGATGGGATGGATGGAATCAAAATCTCTCAGGGGCT 179
Query 741 TGGGCTGCAGGACTTTGACCTAATCAGAGTCATCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TGGGCTGCAGGACTTTGACCTAATCAGAGTCATCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGA 253
Query 815 AGAAGAATGACCAAATTTACGCCATGAAAGTGGTGAAGAAAGAGCTGGTGCATGATGACGAGGATATTGACTGG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 254 AGAAGAATGACCAAATTTACGCCATGAAAGTGGTGAAGAAAGAGCTGGTGCATGATGACGAGGATATTGACTGG 327
Query 889 GTACAGACAGAGAAGCACGTGTTTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGGATTACACTCCTGCTTCCA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 328 GTACAGACAGAGAAGCACGTGTTTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGGATTACACTCCTGCTTCCA 401
Query 963 GACGACAAGTC------------------------GGTTGTTCCTGGTCATTGAGTACGTCAACGGCGGGGACC 1012
||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 402 GACGACAAGTCGCCTCCGGCGCCTCTCTCCCTGCAGGTTGTTCCTGGTCATTGAGTACGTCAACGGCGGGGACC 475
Query 1013 TGATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGAGGAGCACGCCAGGTTCTACGCGGCCGAGATCTGCATC 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 TGATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGAGGAGCACGCCAGGTTCTACGCGGCCGAGATCTGCATC 549
Query 1087 GCCCTCAACTTCCTGCACGAGAGGGGGATCATCTACAGGGACCTGAAGCTGGACAACGTCCTCCTGGATGCGGA 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 GCCCTCAACTTCCTGCACGAGAGGGGGATCATCTACAGGGACCTGAAGCTGGACAACGTCCTCCTGGATGCGGA 623
Query 1161 CGGGCACATCAAGCTCACAGACTACGGCATGTGCAAGGAAGGCCTGGGCCCTGGTGACACAACGAGCACTTTCT 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 624 CGGGCACATCAAGCTCACAGACTACGGCATGTGCAAGGAAGGCCTGGGCCCTGGTGACACAACGAGCACTTTCT 697
Query 1235 GCGGAACCCCGAATTACATCGCCCCCGAAATCCTGCGGGGAGAGGAGTACGGGTTCAGCGTGGACTGGTGGGCG 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 698 GCGGAACCCCGAATTACATCGCCCCCGAAATCCTGCGGGGAGAGGAGTACGGGTTCAGCGTGGACTGGTGGGCG 771
Query 1309 CTGGGAGTCCTCATGTTTGAGATGATGGCCGGGCGCTCCCCGTTCGACATCATCACCGACAACCCGGACATGAA 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 CTGGGAGTCCTCATGTTTGAGATGATGGCCGGGCGCTCCCCGTTCGACATCATCACCGACAACCCGGACATGAA 845
Query 1383 CACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAGCCCATCCGGATCCCCCGGTTCCTGTCCGTCAAAGCCT 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 846 CACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAGCCCATCCGGATCCCCCGGTTCCTGTCCGTCAAAGCCT 919
Query 1457 CCCATGTTTTAAAAGGATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCT 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 920 CCCATGTTTTAAAAGGATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCT 993
Query 1531 GACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGCTGGAGAAGAAGCAGGCGCTCCCTCCATT 1604
|||||||||||||||||||||||||||||||||||||||||||||.||.|
Sbjct 994 GACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGATGCA------------------------ 1043
Query 1605 CCAGCCA---CAGAT-CACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCACCAG-CGA---GCCCGT 1670
|||.|| ||||| ||||||| |.|.||||.||.|.||||| |||| ||| |..||.
Sbjct 1044 -CAGACAACTCAGATGCACAGAC-------GCCCGGACGACGTGGACAC--------CCAGACGATGTGGACGC 1101
Query 1671 GCAGCTGAC-------CCCAGACGATGAGGATGC--------CATAAAGA---GGATCGA-----CCAGTCAGA 1721
.|||..||| |.|||||||||.|||||| |.||.|.| |||| || ||| ||||
Sbjct 1102 ACAGACGACATGGACGCACAGACGATGTGGATGCACGGACGACGTAGACACACGGAT-GACTCATCCA--CAGA 1172
Query 1722 GTTCGAAGGCTTTGAGT-ATAT-CA-----ACCCATTATTGCTGTC----------CACCGAGGAGTCGG---- 1774
|||.| |.|| || ||||| |.| |||.||.||..|||
Sbjct 1173 ------------TGACTCAGATGCACGGACACCCA--------GACGACGCGGACGCACAGACGACGCGGACGC 1226
Query 1775 -----TG--------------- 1776
||
Sbjct 1227 ACAGATGACGTGGACGCACAGA 1248
