Nucleotide Global Alignment

Description

• Query: TRCN0000471908
• Subject: NM_001276699.2
• Aligned Length: 1186
• Identities: 543
• Gaps: 632

Alignment

Query    1  ATGGAGGAGCCGCAGTCAGATCCTAGCGTCGAGCCCCCTCTGAGTCAGGAAACATTTTCAGACCTATGGAAACT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ACTTCCTGAAAACAACGTTCTGTCCCCCTTGCCGTCCCAAGCAATGGATGATTTGATGCTGTCCCCGGACGATA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTGAACAATGGTTCACTGAAGACCCAGGTCCAGATGAAGCTCCCAGAATGCCAGAGGCTGCTCCCCGCGTGGCC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CCTGCACCAGCAGCTCCTACACCGGCGGCCCCTGCACCAGCCCCCTCCTGGCCCCTGTCATCTTCTGTCCCTTC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCAGAAAACCTACCAGGGCAGCTACGGTTTCCGTCTGGGCTTCTTGCATTCTGGGACAGCCAAGTCTGTGACTT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GCACGTACTCCCCTGCCCTCAACAAGATGTTTTGCCAACTGGCCAAGACCTGCCCTGTGCAGCTGTGGGTTGAT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TCCACACCCCCGCCCGGCACCCGCGTCCGCGCCATGGCCATCTACAAGCAGTCACAGCACATGACGGAGGTTGT  518
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ---------------------------------ATGGCCATCTACAAGCAGTCACAGCACATGACGGAGGTTGT  41

Query  519  GAGGCGCTGCCCCCACCATGAGCGCTGCTCAGATAGCGATGGTCTGGCCCCTCCTCAGCATCTTATCCGAGTGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   42  GAGGCGCTGCCCCCACCATGAGCGCTGCTCAGATAGCGATGGTCTGGCCCCTCCTCAGCATCTTATCCGAGTGG  115

Query  593  AAGGAAATTTGCGTGTGGAGTATTTGGATGACAGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCCG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  116  AAGGAAATTTGCGTGTGGAGTATTTGGATGACAGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCCG  189

Query  667  CCTGAGGTTGGCTCTGACTGTACCACCATCCACTACAACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  190  CCTGAGGTTGGCTCTGACTGTACCACCATCCACTACAACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAA  263

Query  741  CCGGAGGCCCATCCTCACCATCATCACACTGGAAGACTCCAGTGGTAATCTACTGGGACGGAACAGCTTTGAGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  264  CCGGAGGCCCATCCTCACCATCATCACACTGGAAGACTCCAGTGGTAATCTACTGGGACGGAACAGCTTTGAGG  337

Query  815  TGCGTGTTTGTGCCTGTGCTGGGAGAGACCGGCGCACAGAGGAAGAGAATCTCCGCAAGAAAGGGGAGCCTCAC  888
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  338  TGCGTGTTTGTGCCTGTCCTGGGAGAGACCGGCGCACAGAGGAAGAGAATCTCCGCAAGAAAGGGGAGCCTCAC  411

Query  889  CACGAGCTGCCCCCAGGGAGCACTAAGCGAGCACTGCCCAACAACACCAGCTCCTCTCCCCAGCCAAAGAAGAA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  412  CACGAGCTGCCCCCAGGGAGCACTAAGCGAGCACTGCCCAACAACACCAGCTCCTCTCCCCAGCCAAAGAAGAA  485

Query  963  ACCACTGGATGGAGAATATTTCACCCTTCAGATCCGTGGGCGTGAGCGCTT-CGA-GATGTT-----CCGAGAG  1029
            |||||||||||||||||||||||||||||||||.|   ..|.|||   ||| ||| |.||||     |.||.| 
Sbjct  486  ACCACTGGATGGAGAATATTTCACCCTTCAGATGC---TACTTGA---CTTACGATGGTGTTACTTCCTGATA-  552

Query 1030  CTGAATGAGGCCTTGGAACTCAAGGATGCCCAGGCTGGGAAGGAGCCAGGGGGGAGCAGGGCTCACTCCAGCCA  1103
                            |||||...|                                                 
Sbjct  553  ----------------AACTCGTCG-------------------------------------------------  561

Query 1104  CCTGAAGTCCAAAAAGGGTCAGTCTACCTCCCGCCATAAAAAACTCATGTTCAAGACAGAAGGGCCTGACTCAG  1177
                                                                                      
Sbjct  562  --------------------------------------------------------------------------  561

Query 1178  AC  1179
              
Sbjct  562  --  561