Nucleotide Global Alignment

Description

• Query: TRCN0000471960
• Subject: XR_001783204.1
• Aligned Length: 1335
• Identities: 810
• Gaps: 396

Alignment

Query    1  -------------------------------------------------------------ATGGTGGCG-CCT  12
                                                                         |||||||.| |||
Sbjct    1  CGGGGCCTGGCGATCCGGATCCCGCAGGCGCGCTGGCTGCGCTGCCCGGCTGTCTGTCGTCATGGTGGGGCCCT  74

Query   13  GTGTGGTACTTGGTAGCGGCGGCTCTGCTAGTCGGCTTTATCCTCTTCCTGACTCGCAGCCGGGGCCGGGCGGC  86
            |.|| |||..||||.|||||.|.|.||||..|||||.|.||||||||||||||||||||||||||.||||||||
Sbjct   75  GGGT-GTATCTGGTGGCGGCAGTTTTGCTCATCGGCCTGATCCTCTTCCTGACTCGCAGCCGGGGTCGGGCGGC  147

Query   87  ATCAGCCGGCCAAGAGCCACTGCACAATGAG---GAGCTGGCAGGAGCAGGCCGGGT-GGCCCAGC-CTGGGCC  155
            |.||||.|.|..|||.|||||||||||||||   |||..||||||||||||||.||| ||||  || ||..|||
Sbjct  148  AGCAGCTGACGGAGAACCACTGCACAATGAGGAAGAGAGGGCAGGAGCAGGCCAGGTAGGCC--GCTCTTTGCC  219

Query  156  CCTGGAGCCTGAGGAGCCGAGAGCTGGAGGCAGGCCTCGGCGCCGGAGGGACCTGGGCAGCCGCCTACAGGCCC  229
            ||.||||.||||.||.|.||||.|||||.||||.||.|||||.|||||||||.||||||||||.||||||||||
Sbjct  220  CCAGGAGTCTGAAGAACAGAGAACTGGAAGCAGACCCCGGCGTCGGAGGGACTTGGGCAGCCGTCTACAGGCCC  293

Query  230  AGCGTCGAGCCCAGCGGGTGGCCTGGGCAGAAGCAGATGAGAACGAGGAGGAAGCTGTCATCCTAGCCCAGGAG  303
            ||||||||||||||||.||||||||||.|||.|..||||||||.|.||...||.||||.||.|.||||||||||
Sbjct  294  AGCGTCGAGCCCAGCGAGTGGCCTGGGAAGACGGGGATGAGAATGTGGGTCAAACTGTTATTCCAGCCCAGGAG  367

Query  304  GAGGAAGGTGTCGAGAAGCCAGCGGAAACTCACCTGTCGGGGAAAATTGGAGCTAAGAAACTGCGGAAGCTGGA  377
            ||.|||||..|.|||||||||||.|||..|||||...|.||||||||||||||.||||||||.||||||||.||
Sbjct  368  GAAGAAGGCATTGAGAAGCCAGCAGAAGTTCACCCAACAGGGAAAATTGGAGCCAAGAAACTACGGAAGCTAGA  441

Query  378  GGAGAAACAAGCGCGAAAGGCCCAGCGTGAGGCAGAGGAGGCTGAACGTGAGGAGCGGAAACGACTCGAGTCCC  451
            |||.|||||.||.||||||||.|||||.|||||||||||||||||||||||.||.||||||||.||.|||||||
Sbjct  442  GGAAAAACAGGCTCGAAAGGCTCAGCGAGAGGCAGAGGAGGCTGAACGTGAAGAACGGAAACGCCTAGAGTCCC  515

Query  452  AGCGCGAAGCTGAGTGGAAGAAGGAGGAGGAGCGGCTTCGCCTGGAGGAGGAGCAGAAGGAGGAGGAGGAGAGG  525
            |.||.||.||.||.|||||||||||.|||||.||||||||||||.||||.||.||||||||||||||.||||||
Sbjct  516  AACGTGAGGCCGAATGGAAGAAGGAAGAGGAACGGCTTCGCCTGAAGGAAGAACAGAAGGAGGAGGAAGAGAGG  589

Query  526  AAGGCCCGCGAGGAGCAGGCCCAGCGGGAGCATGAGGAGTACCTGAAACTGAAGGAGGCCTTTGTGGTGGAGGA  599
            |||||.|..|||||||||||||.|||||||||.|||||||||||||||||||||||||||||.|||||.||.||
Sbjct  590  AAGGCTCAGGAGGAGCAGGCCCGGCGGGAGCACGAGGAGTACCTGAAACTGAAGGAGGCCTTCGTGGTAGAAGA  663

Query  600  GGAAGGCGTAGGAGAGACCATGACTGAGGAACAGTCCCAGAGCTTCCTGACAGAGTTCATCAACTACATCAA--  671
            .|||||.||..|.||.||||||||||||||.|||||.||.||||||||||||||.||||||||.||||||||  
Sbjct  664  AGAAGGTGTTAGCGAAACCATGACTGAGGAGCAGTCTCACAGCTTCCTGACAGAATTCATCAATTACATCAAGG  737

Query  672  --------------------------------------------------------------------------  671
                                                                                      
Sbjct  738  TGAGAGAGGGTTATGCCTCAGACAGTGTGAAGAGGCTGAGTGAAAAGAAGTGTACACCTCTCAGGACAGTGGAG  811

Query  672  --------------------------------------------------------------------------  671
                                                                                      
Sbjct  812  ATCGAAGCAGAAGAATGTGAGGCAAACACAAGAGAGAAACAAGTCTCTGGGCCTTGTGAAAGACCTCAGGCCTG  885

Query  672  ----------------------------------------------------GCAGTCCAAGGTTGTGCTCTTG  693
                                                                |.||||||||||||||||.|||
Sbjct  886  TTATCATCTGGTCTGTGTATGTCTGTTTCACCAGATAGGCTTTTAGCTCAGCGAAGTCCAAGGTTGTGCTTTTG  959

Query  694  GAAGACCTGGCTTCCCAGGTGGGCCTACGCACTCAGGACACCATAAATCGCATCCAGGACCTGCTGGCTGAGGG  767
            |||||.|||||||.||||.||||||||.|.|||||||||.|||||||.||||||||||||||||||.|.|||||
Sbjct  960  GAAGATCTGGCTTTCCAGATGGGCCTAAGGACTCAGGACGCCATAAACCGCATCCAGGACCTGCTGACGGAGGG  1033

Query  768  GACTATAACAGGTGTGATTGACGACCGGGGCAAGTTCATCTACATAACCCCAGAGGAACTGGCCGCCGTGGCCA  841
            ||||.|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||||
Sbjct 1034  GACTCTAACAGGTGTGATTGACGACCGGGGCAAGTTTATCTACATAACCCCAGAGGAACTGGCTGCCGTGGCCA  1107

Query  842  ACTTCATCCGACAGCGGGGCCGGGTGTCCATCGCCGAGCTTGCCCAAGCCAGCAACTCCCTCATCGCCTGGGGC  915
            |.||||||||||||||||||||||||||||||.|.|||||||||||.||||||||||||||||||.||||||||
Sbjct 1108  ATTTCATCCGACAGCGGGGCCGGGTGTCCATCACAGAGCTTGCCCAGGCCAGCAACTCCCTCATCTCCTGGGGC  1181

Query  916  CGGGAGTCCCCTGCCCAAGCCCCAGCC-----------------------------------------------  942
            |.|||...|||||||||.||..|||||                                               
Sbjct 1182  CAGGACCTCCCTGCCCAGGCTTCAGCCTGACTCCAGTCCTTCCTTGAGTGTATCCTGTGGCCTACATGTGTCTT  1255

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1256  CATCCTTCCCTAATGCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCTGTGAATA  1329

Query  943  ---  942
               
Sbjct 1330  CTG  1332