Nucleotide Global Alignment
Description
- Query:
- TRCN0000472100
- Subject:
- XM_005259223.3
- Aligned Length:
- 2118
- Identities:
- 1172
- Gaps:
- 753
Alignment
Query 1 ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGGGACAGCAACCCAAAGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAGCACATGAAGAGTGGTC 296
|..|||.|||||.|||||.|||||.|||||.|||||||||..|.||.
Sbjct 1 ---------------------------ATGGAGATGGAGACTGTTTCAGAATCAGGAACACATGAAGGCTTGTT 47
Query 297 CTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCAGGTCTCAGGACTCTATCATAAATAACTCTCAGT 370
|.|.||.||||.|||||||||||||.|||..|||||||||||||.|||.|||||.||..||||.|.||.|||||
Sbjct 48 CAGTCATCAAACCTGGGAACAAATTTCAAGTGACTTAACCAGGTTTCAAGACTCCATGGTAAACAGCTTTCAGT 121
Query 371 TCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGACTACCCACAATTCATACAGGACAGAAACCTTCC 444
|||...||.|.|.||||.|.||||.|||||||||.|||||||||.|.|.||||||...|.|||||||||||||.
Sbjct 122 TCTCCAAACAAGATGATATGCCCTGCCAGGTTGATGCAGGACTATCTATAATTCACGTAAGACAGAAACCTTCT 195
Query 445 CAGGGTGGGAAGTGTAAACAGTCCTTCAGTGATGTTCCCATCTTTGATCTTCCTCAGCAGTTATACTCAGAAGA 518
.|||||.|||.|||||||.|||||||.||||||||..||.||.|||||||||.|||.||..||.|.|||..|||
Sbjct 196 GAGGGTAGGACGTGTAAAAAGTCCTTTAGTGATGTCTCCGTCCTTGATCTTCATCAACAACTACAGTCAAGAGA 269
Query 519 GAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCTGTTACATCTCAGCTCTTCATGTTCATCAGAGAGTCC 592
|||||||.|||||||||||||.||||||||.||..|||||||.|.|||||||||||.|.|||||||||||||.|
Sbjct 270 GAAGTCTCATACATGTGATGAATGTGGAAAGAGTTTCTGTTATAGCTCAGCTCTTCGTATTCATCAGAGAGTTC 343
Query 593 ACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTCAAAGCTCACATCTGCAAACTCAT 666
||.||||.||||||||||.||..||||||||||||||.||||||||.|.|||.||||||||||||||||.||||
Sbjct 344 ACATGGGGGAGAAACTCTATAATTGTGATGTGTGTGGTAAGGAATTCAATCAGAGCTCACATCTGCAAATTCAT 417
Query 667 CAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAGCACT 740
||||||.||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||||||.|||
Sbjct 418 CAGAGAATCCACACTGGAGAGAAACCATTCAAATGTGAGCAGTGTGGGAAAGGCTTTAGTCGTAGATCAGGACT 491
Query 741 TAATGTTCATCATAAATTACACACAGGAGAGAAACCTTACATTTGTGAGGCATGTGGGAAGGCCTTCATTCATG 814
|.|||||||||.|||||||||||||||||.|||||||.|.|||||||||..|||||||||||||||||||||||
Sbjct 492 TTATGTTCATCGTAAATTACACACAGGAGTGAAACCTCATATTTGTGAGAAATGTGGGAAGGCCTTCATTCATG 565
Query 815 ATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAATGTGATATATGTGGTAAGACC 888
|||||||||||.||||||||.|.||||||||||||||||||||.|||||||||||||||||||||.||||||.|
Sbjct 566 ATTCCCAGCTTCAGGAACATCAAAGAATCCATACTGGGGAGAAGCCATTCAAATGTGATATATGTTGTAAGAGC 639
Query 889 TTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGTTCACACAGGAGAAAAACCATTTAGGTGTGATACATG 962
|||..|..|||..|||..|||||.||.||||||||||||||||...||||.||||||||.||.|||||||||||
Sbjct 640 TTCCGTAGTAGAGCAAATCTTAATAGGCATTCCATGGTTCACATGCGAGAGAAACCATTCAGATGTGATACATG 713
Query 963 TGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGCATTGCATGGTCCACACAGGAGAGAAACCGTACAGAT 1036
||.||||||||||..||.||.|||||||||||||||.|||.||||||||||||||||||||||||.|||||.||
Sbjct 714 TGGTAAGAGCTTTGGTCTGAAATCAGCACTTAATAGTCATCGCATGGTCCACACAGGAGAGAAACGGTACAAAT 787
Query 1037 GTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATCAGGTGGTCCACACAGGAGAGAAA 1110
|||||.|.|||||||||.||||.|||..|||||.||||.||||||||||||||.|.|.|||||||||.|||||.
Sbjct 788 GTGAGGAATGTGGAAAACGCTTCATTTATAGGCAAGATCTTTATAAGCATCAGATAGACCACACAGGGGAGAAG 861
Query 1111 CCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATGCCTTTTGAACCATCAGCGAGTCCACAG 1184
|||||||||||||||||||||||.|||||||||||||||.|||||.|.||||..|..|||..||||||||||||
Sbjct 862 CCATATAATTGTAAAGAATGTGGAAAGAGCTTCAGATGGGCCTCAGGTCTTTCAAGACATGTGCGAGTCCACAG 935
Query 1185 TGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACAACTGTCTTCCCATCAGA 1258
||||||.|.||..||||||||||||||||||||||||||||||||||||||||||||||..|.|||.||.||||
Sbjct 936 TGGAGAGACAACATTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACAACGTTATTCTCACCAGA 1009
Query 1259 GATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGTGTGGGAAGGGCTA-----------TG--------- 1312
||.|.||||||||.|||||||||||||.|||||||||||||||||||||||| ||
Sbjct 1010 GAGCGCACAGTGGAGAAAAGCCATATAGATGTGAGGAGTGTGGGAAGGGCTACAAAAGGAGGTTGGATCTTGAC 1083
Query 1313 -------------------------------------------------------------------------- 1312
Sbjct 1084 TTTCATCAGAGGGTCCACAGAGGAGAGAAACCCTATAATTGTAAGGAATGTGGGAAGAGCTTTGGCTGGGCCTC 1157
Query 1313 -----------------------------------------------------------------------TTA 1315
|||
Sbjct 1158 GTGTCTTTTGAATCATCAGAGAATCCACAGTGGAGAAAAACCATTTAAATGTGAAGAATGTGGGAAAAGATTTA 1231
Query 1316 C------------------------------------------------------------------------- 1316
|
Sbjct 1232 CTCAGAATTCACAACTTTATACCCATCGTAGAGTCCACAGTGGAGAAAAACCATTCAAATGTGAAGAGTGTGGG 1305
Query 1317 -------------------------------------------------------------------------- 1316
Sbjct 1306 AAAAGATTTACTCAGAATTCACAACTTTATTCTCATCGCAGAGTCCACACTGGAGTAAAGCCATACAAATGTGA 1379
Query 1317 ------------------------TAAGTTTAATCTTGACTTGCACCAGAGGGTCCACACGGGAGAGAGACCTT 1366
||||||||||||||||.|||||||||||||||||||.|||||||||||||
Sbjct 1380 AGAGTGTGGGAAGGGCTTCAACAGTAAGTTTAATCTTGACATGCACCAGAGGGTCCACACCGGAGAGAGACCTT 1453
Query 1367 ATAATTGTAAGGAATGTGGGAAGAACTTTAGCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCC-------- 1432
||||||||||.|||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1454 ATAATTGTAAAGAATGTGGGAAGAGCTTTAGCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCATGGTGAT 1527
Query 1433 ---------------------------------------ACTG-------------------CCA--------- 1439
|||| |||
Sbjct 1528 GAAAAGCCATTCAAATGTGAAGAGTGTGGGAAGAGATTTACTGAGAATTCACAGCTTCATTCCCATCAGAGGGT 1601
Query 1440 ---------GAAAAAACCATTCA--------------------------------------------------- 1453
|.||||.||||.||
Sbjct 1602 TCACACTGGGGAAAAGCCATACAAATGTGAGAAGTGTGGAAAGAGCTTCAGATGGGCCTCAACTCATCTAACCC 1675
Query 1454 ---------------------------------AATGTGAGGACTGTGGAAAGAGGCTTGTACACAGGACATAC 1494
||||||||||||||||.|||||..||||.|||||..|||.|
Sbjct 1676 ATCAGAGACTCCACAGTAGAGAAAAACTACTTCAATGTGAGGACTGTGGGAAGAGCATTGTGCACAGTTCATGC 1749
Query 1495 CGTAAAGACCAGCCGAGAGACTATAGTGGGGAAAACCCATCCAAATGTGAGGATTGTGGGAGACGCTACAAGAG 1568
|.|||||||||.|..||||||.|.|||||.||.||..||||.|||||||||||.|||||||..|||||||||||
Sbjct 1750 CTTAAAGACCAACAAAGAGACCAAAGTGGAGAGAAAACATCTAAATGTGAGGACTGTGGGAAGCGCTACAAGAG 1823
Query 1569 GCGCTTGAATCTGGATATACTTTTATCATTATTTCTAAATGACACA 1614
||||||||||||.||||..|||||.|||||||||.|||||||||||
Sbjct 1824 GCGCTTGAATCTTGATACGCTTTTGTCATTATTTTTAAATGACACA 1869
