Nucleotide Global Alignment

Description

• Query: TRCN0000472100
• Subject: XM_017027261.2
• Aligned Length: 2145
• Identities: 1383
• Gaps: 555

Alignment

Query    1  ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT  74
            ||||||||.||||||||||||.|||||||||||||.|||||||||||||||||||||||.||||||||||||||
Sbjct    1  ATGACCACGTTCAAGGAGGCAATGACCTTCAAGGACGTGGCTGTGGTCTTCACTGAGGAAGAGCTGGGGCTGCT  74

Query   75  GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC  148
            |||||.|||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct   75  GGACCTTGCTCAGAGGAAGCTGTATCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGACATC  148

Query  149  AACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGGGACAGCAACCCAAAGA  222
            ||.|.||||||...|||||||.||||||||||||||||||||||.|||||||||||..||||||||.||||||.
Sbjct  149  AAGCATTCCACAGGGATACTTTCCACTTCCTAAGGGAAGAAAAGATTTGGATGATGAAGACAGCAATCCAAAGG  222

Query  223  GAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAGCACATGAAGAGTGGTC  296
            ||||||||||||||||.||||||||||||||||.|||||.|||||.|||||||||||.|||||.||||||||||
Sbjct  223  GAAGGGAATTCAGGAGACAAGATCCAAACTGAGATGGAGACTGTTTCAGAAGCAGGAACACATCAAGAGTGGTC  296

Query  297  CTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCAGGTCTCAGGACTCTATCATAAATAACTCTCAGT  370
            ||.||||||||||||||||.|||||||||..||.||||||||||||||.||||..||.|||||||.||||||||
Sbjct  297  CTTCCAGCAAATCTGGGAAAAAATTGCAAGTGATTTAACCAGGTCTCAAGACTTGATGATAAATAGCTCTCAGT  370

Query  371  TCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGACTACCCACAATTCATACAGGACAGAAACCTTCC  444
            |||...||.|.||||||.||||||.||||..|||.|||||||||.|...||||||.|||.||||||||.|||||
Sbjct  371  TCTCCAAAGAAGGTGATTTCCCCTGCCAGACTGAGGCAGGACTATCTGTAATTCACACAAGACAGAAATCTTCC  444

Query  445  CAGGG---TGGGAAGTGTAAACAGTCCTTCAGTGATGT-TCCCATCTTTGATCTTCCTCAGCAGTTATACTCAG  514
            |||||   |||   .|.|||||..|||||||||||||| ||||| |||||||.|||.|||.||.|||.||||||
Sbjct  445  CAGGGCAATGG---ATATAAACCATCCTTCAGTGATGTCTCCCA-CTTTGATTTTCATCAACAATTACACTCAG  514

Query  515  AAGAGAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCTGTTACATCTCAGCTCTTCATGTTCATCAGAGA  588
            .||||||.|||.||||.|||||||||||||||||.|.|.|.||||||||||||||.||||.|.|||||||||||
Sbjct  515  GAGAGAAATCTCATACGTGTGATGAGTGTGGAAAGAACTTTTGTTACATCTCAGCCCTTCGTATTCATCAGAGA  588

Query  589  GTCCACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTCAAAGCTCACATCTGCAAAC  662
            ||||||.|||||||||||..||.||.||||||.||||||||.||||||||.|||||.||.||||||||||||||
Sbjct  589  GTCCACATGGGAGAGAAATGCTATAAGTGTGACGTGTGTGGTAAGGAATTCAGTCAGAGTTCACATCTGCAAAC  662

Query  663  TCATCAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAG  736
            ||||||||||||||||||||||||||||||.||||||||||.|.|||||||||||||.||||||||||||||||
Sbjct  663  TCATCAGAGAGTCCACACTGGAGAGAAACCGTTCAAATGTGTGGAATGTGGGAAAGGCTTCAGTCGTAGATCAG  736

Query  737  CACTTAATGTTCATCATAAATTACACACAGGAGAGAAACCTTACATTTGTGAGGCATGTGGGAAGGCCTTCATT  810
            |||||||||||||||||||||||||||||||||||||||||||.|.||||||||.|||.|||||||||||||||
Sbjct  737  CACTTAATGTTCATCATAAATTACACACAGGAGAGAAACCTTATAATTGTGAGGAATGCGGGAAGGCCTTCATT  810

Query  811  CATGATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAATGTGATATATGTGGTAA  884
            ||.||||||||||||.|.||||||.|||||||||||||.||||||||.||||||||||||||||||||||||||
Sbjct  811  CACGATTCCCAGCTTCAAGAACATCAGAGAATCCATACGGGGGAGAAGCCATTCAAATGTGATATATGTGGTAA  884

Query  885  GACCTTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGTTCACACAGGAGAAAAACCATTTAGGTGTGATA  958
            ||.|||||.|..|||.|||||||||||.||.|||||||||||||||||.|.|||.||||||||..|.|||||||
Sbjct  885  GAGCTTCTGTGGTAGATCAAGACTTAATAGGCATTCCATGGTTCACACGGCAGAGAAACCATTCCGATGTGATA  958

Query  959  CATGTGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGCATTGCATGGTCCACACAGGAGAGAAACCGTAC  1032
            |.||||||||||||||||.|||||||||||||||||||||.|||.|||||.|||||||||||||||||||.|||
Sbjct  959  CGTGTGATAAGAGCTTTCGTCAGAGATCAGCACTTAATAGTCATCGCATGATCCACACAGGAGAGAAACCATAC  1032

Query 1033  AGATGTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATCAGGTGGTCCACACAGGAGA  1106
            |.|||||||.||||||||||||||||||||.||||||.||||.||||||.||||||..||||||||||.|||||
Sbjct 1033  AAATGTGAGGAGTGTGGAAAAGGCTTTATTTGTAGGCGAGATCTTTATACGCATCATATGGTCCACACGGGAGA  1106

Query 1107  GAAACCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATGCCTTTTGAACCATCAGCGAGTCC  1180
            .||.|||||||||||||||||.|||||||||||||||||||||.||||.||.||||||||.|||||||||||||
Sbjct 1107  AAAGCCATATAATTGTAAAGAGTGTGGGAAGAGCTTCAGATGGGCCTCGTGTCTTTTGAAACATCAGCGAGTCC  1180

Query 1181  ACAGTGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACAACTG-TCTTCCCA  1253
            ||||||||||||||...|||||||||||||||||||||||.||||||||.|||||||||||| || |.||||||
Sbjct 1181  ACAGTGGAGAAAAACCATTCAAATGTGAAGAATGTGGGAAAGGATTTTACACAAATTCACAA-TGCTATTCCCA  1253

Query 1254  TCAGAGATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGTGTGGGAAGGGCTATGTTACTAA-----GTT  1322
            .|||||||||||.|||||.|||||.|||||.|||||||.||||||||||||||||     |||.||     |||
Sbjct 1254  CCAGAGATCCCATAGTGGAGAAAAACCATACAAATGTGTGGAGTGTGGGAAGGGC-----TACAAAAGGAGGTT  1322

Query 1323  TAATCTTGACTTGCACCAGAGGGTCCACACGGGAGAGAGACCTTATAATTGTAAGGAATGTGGGAAGAACTTTA  1396
            ..||||||||||.||||||.|.|||||.||.|||||||.||..|||||||||||||||||||||||||.|||||
Sbjct 1323  GGATCTTGACTTTCACCAGCGCGTCCATACAGGAGAGAAACTGTATAATTGTAAGGAATGTGGGAAGAGCTTTA  1396

Query 1397  GCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCAC--TGCCAGA-AAAAACCATTCAAATGTGAGGACTGT  1467
            |.||||||.||.||.|||||||.|||.|||||||||||  ||   || |||||||||||.|||||||.||.|||
Sbjct 1397  GTCGGGCCCCATGTCTTTTGAAACATGAGAGACTCCACAGTG---GAGAAAAACCATTCCAATGTGAAGAGTGT  1467

Query 1468  GGAAAGAGGCTTGTACACAGGA--CATACCGTAAAGACCAGCCGAGAGACTATAGTGGGGAAAACCCATCCAAA  1539
            ||.|||||  .|.|||.||..|  ||.|.|.|.|...|||.|.|||||...|.|.|||.|||||.||||.||||
Sbjct 1468  GGGAAGAG--ATTTACTCAAAATTCACATCTTCATTCCCATCAGAGAGTTCACACTGGAGAAAAGCCATACAAA  1539

Query 1540  TGTGAGGATTGTGGGAGACGCTACAAGAGGCGCTTGAATCTGGATATACTTTTATCATTATTTCTAAATGACAC  1613
            ||||||.|.|||||.|...|||||||.||....||.|||||.|||||.|    |.||..|..||     .||||
Sbjct 1540  TGTGAGAAGTGTGGAAAGGGCTACAATAGTAAGTTTAATCTTGATATGC----ACCAGAAGGTC-----CACAC  1604

Query 1614  A-------------------------------------------------------------------------  1614
            |                                                                         
Sbjct 1605  AGGAGAGAGACCATACAATTGTAAGGAATGTGGGAAGAGTTTTGGCTGGGCCTCGTGTCTTTTGAAACATCAGA  1678

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 1679  GACTGCACAGTGGAGAAAAACCATTCAAATGTGAAGAGTGTGGGAAAAGATTTACTCAGAATTCACAGCTTCAT  1752

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 1753  TCTCATCAAAGAGTGCACACTGGAGAAAAGCCATACAAATGTGATGAGTGTGGGAAGGGCTTCAGCTGGTCCTC  1826

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 1827  AACTCGTCTGACCCATCAGAGACGCCACAGCAGAGAAACACCTCTCAAATGTGAGCAGCATGGGAAGAACATTG  1900

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 1901  TACAGAATTCATTCTCTAAAGTGCAAGAAAAAGTTCACAGTGTAGAAAAGCCATACAAATGTGAGGACTGTGGG  1974

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 1975  AAGGGCTACAACAGGCGCTTGAATCTTGATATGCATCAGAGGGTCCACATGGGAGAGAAAACATGGAAGTGTAG  2048

Query 1615  -------------------------------------------------------------------------  1614
                                                                                     
Sbjct 2049  GGAGTGTGATATGTGCTTTAGTCAGGCCTCAAGCCTTCGACTTCATCAGAATGTTCATGTTGGAGAAAAACCT  2121