Nucleotide Global Alignment

Description

Query:
TRCN0000472181
Subject:
XR_934480.3
Aligned Length:
2587
Identities:
477
Gaps:
2108

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTCACAAAACTTCGAGCTCATTGGTGCAAAAGCTCCAGGAGGCGGTGGGTGATTGGTTGGTTGCTGTTCCTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCCACGCCTGTCGTGGTTTAGCTGAACTGAGCTGAAATCCTAAAGGCCGCGGAGTCGGCGGTGTTGTAGGTAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGTACCTTGAGTGGCAACAGAATTCGATTAAATTACAATGGGAAACATTTTTGAAAAGCTCTTTAAAAGTCTA  222

Query    1  ---------------ATGCGGATTCTTATATTGAGTTTGGATACAGCTGGAAAAACCACCATCTTGTATAAATT  59
                           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTTGGGAAAAAAAAGATGCGGATTCTTATATTGAGTTTGGATACAGCTGGAAAAACCACCATCTTGTATAAATT  296

Query   60  GAAGCTGGGGGAGACTGTGCCTGCCGTCCCTACAGTAGGTTTCTGTGTGGAGACAGTAGAATATAAAAATAACA  133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAAGCTGGGGGAGACTGTGCCTGCCGTCCCTACAGTAGGTTTCTGTGTGGAGACAGTAGAATATAAAAATAACA  370

Query  134  CCTTCGCTGTCTGGGATGTTGGCAGCCACTTCAAAATCAGACCTCTGTGGCAGCATTTTTTCCAGAACACAAAA  207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCTTCGCTGTCTGGGATGTTGGCAGCCACTTCAAAATCAGACCTCTGTGGCAGCATTTTTTCCAGAACACAAAA  444

Query  208  GGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACTTGCCAGCGGGGTGCTGCCAATAAAATGTAGTCACGT  281
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACTTGCCAGCGGGGTGCTGCCAATAAAATGTAGTCACGT  518

Query  282  GGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTG  355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTG  592

Query  356  GTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGGGGACCGTGGGGCTGCAAGGACCTCAGCAGCGGT  429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGGGGACCGTGGGGCTGCAAGGACCTCAGCAGCGGT  666

Query  430  TTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGCTGTGGTAAAG-----------------------  480
            |||||||||||||||||||||||||||||||||||||||||||| |.||.|                       
Sbjct  667  TTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGCTGT-GCAATGAATCCTCCAATGTACCTGACTCT  739

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct  740  CCCTTCGCGAAGAGCATCCCCTCCATGGCAGAAATCTGAAAATGCCCCTGGGGAGACACATGCACAAGACAGTT  813

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct  814  CGTGAGCCACACATCTCCCCACACCAAGCTCCTCCATACAAGACCTCGGACTGCATCACGTAAATGCTTTTTCA  887

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct  888  GGGGCAAAATCTAGAGAATCTGAAATGGTGAGCCTTTTTCCTTTTTTTTTTTTTTTTTGAGATGAAGTCTCACT  961

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct  962  CTGTTGCCCAGGCTGGAGTGCAGTGCAGTGGTGTGATCTTGGCTCACTGCAAACTCCACCTCCTGGAGTCAAGT  1035

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1036  GATTCTCCTGCCTCAGCCTTCAGAGTAGCTGGGATCATAGATGCCCGTCCCCATGCCTGGTTAATTTTTGTATT  1109

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1110  TTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTTCTGAGCTCAAGTGATCCACCCACCT  1183

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1184  TGGCCTCCCAAAGTGCTGAGATTACAGCATGAGACACCATGCCCAGCTGTGAGCCTGTATCTTAATCAAAGTCC  1257

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1258  TGAGAATAACCTTGAAGAAGACTCCCTTGCAATGAGCAACAACAGAAGAAGCAAGGGACCTGGAATCTGGCAGA  1331

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1332  CCTGGGTTTGAATTCTGGCTCTGTCACTTTCTGGTGAAGTGACTTGAGTAATGAACATGAGCCTTTCTGGGTAG  1405

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1406  CGTTTACAGCACAAAGCAATTTGAGGAATAAATGAAAGAGCACGTGTCTAGTGCCTAGCAATGCGCTGGACACA  1479

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1480  GTGCCGGTGCTCAGCCATCATGTCACACCAGCACTGACCGGTGAGCATAAACCCTGGGGATGCCCAGAGCTGGT  1553

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1554  ACAGCCAGGAGCTCCAGAAGCGTGGGATTCTCAGAGGGAAGTGGAGCTCACTGCTCTACAGGTCCTGTTCAAGT  1627

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1628  TAGAAAGTAAGATACAATGCACACAAAGCCAAATTGTCATCATTCAGCTCCTATTACAGGGGAACTAAGAGCTG  1701

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1702  CATTGAAAATTATTTGCAAAGCTTGTAAGTGGTTCTGCCACTTATTAGCCGTGTGAACCTTAGCAAATTACCTA  1775

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1776  GCGTCTCTGAGTTTCAACTTCCTCATCTACAAAATAGAAATGATAATAATAACCGCATCGCAAGAGTTGTTGGA  1849

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1850  AAAATGAAAATGAGGTATCATAGGAGGTAACATGTATGGAGCATTTACCATAGGCCAAGCACTGTTCTAAGAAC  1923

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1924  TTCGGACATGTTATCTCACTTGTATAAGTACTTAGGTGCCTACAACATAAACAGCACCTGGTAAATTAAGTATT  1997

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1998  GAAAAAATGCTATGGGGCAGAGGAAGAAATGCTAAGCTTCTGTGAGAAGAGAAGACAGCTTGTTACACAGGTGA  2071

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 2072  AAAGAACAAGCTGCAGCTGAGAGAAGAAAAGTATAAGAGTTGCTAGGTGTGACAATCTCAAGACTTTTCAACCA  2145

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 2146  CTACAAATTTAAACAGCCACCCTAAATCACCCCAAAGGACAGACTCGAGTTGTTCTTTTTGTCTTTAATGTTTG  2219

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 2220  CGCCTCTCCGAATCAGAGAAGAAGCTGCCAGGATTCCAGTACATACCAAAACATGATGACAATACCCTCAACTG  2293

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 2294  TGCAAACTTTTGTGCATCTACCGCTATGTAAAGGAAGCTGATGTCAGTAGACTGGGGGGAACAGTAAGGCATGT  2367

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 2368  TTGTGACCGAAGCTCAATTTGCCATCACAGTGTGGCCACACCTACCTCACTAGTATTCTAATAGTGGGATAAAT  2441

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 2442  AATTCAATAGGGATAAAGCCTGGATTTTCCTCTTATTCTCTCTTAGTGCTTACATTCTTGGCATGATATCGATG  2515

Query  481  -----------------------------------------------------------------------  480
                                                                                   
Sbjct 2516  TGCCATAGACAAGCCAATATGTGAGTGTACTCTATCTGAATAAAGTATAGCCTTTCTACATTGCAAAGTCA  2586

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.