Nucleotide Global Alignment
Description
- Query:
- TRCN0000472181
- Subject:
- XR_934913.3
- Aligned Length:
- 1933
- Identities:
- 405
- Gaps:
- 1489
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTCCGTCGAAAAAAAAAAAAAGAAAGAAAGAAAAAAGCTGCAATCAAATGGCCCACCCATCTGATGCCGGGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCAGGATTCAGAGAAAATGTGTACCAAAAAGCCCCCAGGAAACCATAAATGCTGAGCATAGGACTTGGGTGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGGAATGTCCTTCTGCCTCAGCTACTCTGAGATAACATGGTCCCCTGTGTTCATGGAACCCAGATGGCCAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTCAATGATCCAGCACTTATAAGAAAAGAAAGCGATTCAAGAGCCTCTGTACCCACCTAGGCCTCAGCCTCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGACCTACTCACCTATACTCTTCACAACAGGTAACGTTGCCTCTGGCACCCATCATATCCCCTGAATTCAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCAGGACTGATCTGCCATCAGCTCTGGCAGGGAGAGTCCCTTACAAGTGCCAAGAAAAGGAACATGAACAATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCTGTGACCACAGCCAACACCACACAGAACTTCCCAGAAGCTCTCCAGGGCGAGAACACCAACCAGAAGGAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGACAGCTTCCATCATTCTGTGCTAAGTGAGCTGAGTGAGTGGCCATCTCTCACCTTCCAGATATTTGAATGAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCTACCATTCCAGCAGCCAGCACAAGTCATTTAATATGAATGCCAGAAACACAATCCCTGAGGACAGGTACAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGACCAGATGCCAGGAAAAACCCCGGCCCCACCCAAGAGTTGGGGAGAGCCCACTGCTCCTCCACCCTTATTT 740
Query 1 ----------------------------------------------ATGCGGATTCTTATATTGAG-------- 20
.||||| .||| .|.||||
Sbjct 741 ACCACCTGAGCCCCTGCACCCGCCAATCATGCTGCTCAGTCTGTAACTGCGG-GTCT--GAGTGAGCACCTACA 811
Query 21 TTTGGAT--------ACAGCTGGAAAA-----------AC----CACCA-----TCTTGTATAAATTGAAGCTG 66
|||||.| .|||||||...| || |||.| ||..|| |.|||.|.||.||
Sbjct 812 TTTGGCTGTTGAGGGGCAGCTGGTGGAGTTGGCAGGCGACTCTGCACTAAGTTCTCAGGT-TGAATGGGAGTTG 884
Query 67 G-----GGGA--GACTGTGCCTGCCGTCCCTACAG---TAG--------GTTTCTGTG---------------- 106
| |||| ||.|| |.|| ||| ||| |||.|.|||
Sbjct 885 GGTCGAGGGAAGGAATG-----GACG------CAGAGTTAGGGTGAAGAGTTGCGGTGGGTCAGCGGGGGTGAA 947
Query 107 ------TGGAGA---CAGTAGAATATAAAAATAACACCTTCGCTGTCTGGGATGTT---------GGCAGC--- 159
|||||| ||.| |.|||.||.| ||.|.|| .||.||.| ||||||
Sbjct 948 AGGACATGGAGATGTCATT----TTTAACAAGA-----TTGGGTG---AGGGTGGTAGGAAAGGAGGCAGCAAG 1009
Query 160 ---------CACTT---CAAAATCAGA----------------CCTCTGT--GGCAG----------------- 186
||.|| ||| ||| ||||.|| |||||
Sbjct 1010 AGTTCGGGACAGTTTGGCAA----AGACTTAGGGATGGGGTGTCCTCAGTACGGCAGGAGACGCAAAGGAAGGT 1079
Query 187 ---CATT-------------------------------------------------------------TTTTCC 196
||.| ||.|||
Sbjct 1080 ATACAGTGGGCTAGGAGACTAAGGACGAGAAGACACAGTTACGACTTGGAATAAGGCTGAGATCGGAGTTATCC 1153
Query 197 AGAACACAAAAGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACTTGCCAGCGGGGTGCTGCCAATAAAA 270
||||.| ||..|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1154 AGAAGA-AAGCGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCGCTTGCCAGCGGGGTGCTGCCAATAAAA 1226
Query 271 TGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCCATAGCAGCAGGTGTGC 344
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1227 TGTAGTCACGTGGAATTTGGGATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCCATAGCAGCAGGTGTGC 1300
Query 345 AGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGGGGACCGTGGGGCTGCAAGGACC 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1301 AGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGGGGACCGTGGGGCTGCAAGGACC 1374
Query 419 TCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGCTGTGGTAAAG------------ 480
||||||||.||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1375 TCAGCAGCAGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGCTGTG----AGCTATCAGCTTCC 1444
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1445 CAGTTTGCACAATTCATCAAGAAATTATGCGGGGTCACTGGCACAAATGATGAGGCATCTCCTGGAAGCTTAAC 1518
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1519 TTCTTATCCATCCCATCTCTTGGACAGATGATGCCAGTTAATTACTTTGAATGCTCCTCCACCAAGCCAAGGCC 1592
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1593 AGACTCCTGCAATCATAGGATGGCAACACCACCTCTAAAGCACAGAACTTCAGCCTTTGCTTCGGAAGTGGCAC 1666
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1667 CATGGTCTCTTCATTTTCCCTTTCTTCAAGGCAAGTTTGAAAACCACTGCTTTAAAGAAAATGGATACTCCCCT 1740
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1741 TACCAAGCAGAAAGTAGGATTTTGGAAACTGATGCAAGGGAAGCAAAAAAGATGCCTCAGGAGGCACGATTACA 1814
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1815 ACAGGATTGATGCAAACGGAAGCTGAAGCTTAACCAAAGACATTAATGTACGCCCACAAAAGAAACTGCTAAGG 1888
Query 481 --------- 480
Sbjct 1889 AAGTCAAGT 1897
