Nucleotide Global Alignment

Description

Query:
TRCN0000472221
Subject:
XM_006521460.3
Aligned Length:
1110
Identities:
653
Gaps:
390

Alignment

Query    1  ---------------------ATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGC  53
                                 |||||||||||||||||||||||||||||.||||.||||||||||||||||.|
Sbjct    1  ATGCAGACAACGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCACCGGTGGGGGCGGGCGGCCGCCC  74

Query   54  CACAGGCGGCTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT  127
            |...||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||
Sbjct   75  CGGGGGCGGCTGGGGCAAGTGGGTGCGGCTGAACGTGGGGGGCACGGTGTTCCTGACCACCCGCCAGACGCTGT  148

Query  128  GCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGG  201
            |.||.|||||||||||||||||||||||||||||.|||||.||||||||.||.||||||.||||||||||||||
Sbjct  149  GTCGGGAGCAGAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAATCGGACAGGGATGAGACCGGG  222

Query  202  GCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT  275
            |||||||||||||||||||||||||||||||||||||||||||||||.||||||.|||||||.||..|||||||
Sbjct  223  GCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAATTTCCTCAGGCATGGAAAATTGGTGCT  296

Query  276  GGACAAGGACATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCA  349
            |||||||||||||||.|||||||||||||||||||||||.||||||||||||||.||.||.|||||.||.||||
Sbjct  297  GGACAAGGACATGGCCGAGGAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATTGGTCCTCTGATTCGAATCA  370

Query  350  TCAAAGACCGGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCTGCAG  423
            ||||||||.|||||||.|||||.||||||||.||..|||||||.|||||.|||||.||.|||||.|||||||||
Sbjct  371  TCAAAGACAGGATGGAGGAGAAAGACTACACAGTGGCCCAGGTGCCACCTAAGCATGTATACCGAGTGCTGCAG  444

Query  424  TGCCAGGAGGAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACAT  497
            |||||.||||||||||||||.||.|||||.|||||.|||||.||.|||||||||||||||||||||||||||||
Sbjct  445  TGCCAAGAGGAGGAGCTCACACAGATGGTATCCACTATGTCCGACGGCTGGCGCTTCGAGCAGCTGGTGAACAT  518

Query  498  CGGCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCA  571
            ||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||||||||||||.
Sbjct  519  CGGCTCCTCCTACAACTATGGGAGTGAGGACCAGGCCGAGTTCCTGTGTGTGGTGTCTAAGGAGCTCCACAGCT  592

Query  572  CCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCAG  645
            |||||.||||.||||||||.|||||||..|||||..|||||||||||||.|||||||||||||||||||.||.|
Sbjct  593  CCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGCAGCTGGAGGAGCAGCGGCGG  666

Query  646  CAGGAGGAGGAGGTGGAGGAGGTGGAGGTGGAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAAAG----GTG  715
            |      ||||||||||||||||||||||||..|||||||||||||||||.|||||.||||||||||    || 
Sbjct  667  C------AGGAGGTGGAGGAGGTGGAGGTGGCCCAGGTGCAGGTGGAGGCGGATGCCCAGGAGAAAGCCCTGT-  733

Query  716  CAGCCAACCCACAGGAGGATGATTGC------------------------------------------------  741
                ||.|.|     |||||     |                                                
Sbjct  734  ----CATCTC-----AGGAT-----CCCGCTAACCTTTTCTCCCTCCCACCACCGCCTCCTCCTCCTCCGCTTC  793

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct  794  CTGCTGGAGGTCCTGCTTCATCTTCATCCACCTCCTCTTCCTCCTGGATCTCATCTGCACCCTGCCTCTTCCCT  867

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct  868  CTCTGCCCCTGCCCAGGTTTCCTCTCCGCCTGCTCCCGTCTCCACCCTGGGGCTGCCCTAGTCCCAGTCTCCCG  941

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct  942  CGCCCTCTCCCCAAGCCCCCTCGCCCTGCATCCCCAAGCATCCTGCCTGCCGCCTCCTTCGCCCCTTCCAGCCC  1015

Query  742  --------------------------------------------------------------------------  741
                                                                                      
Sbjct 1016  CTCCTGCCTCCTGGCCTGGGGAGGAGGGGCGTGGCCGCATCTGCTCTTTGTCCTCCAACCCAGCAGAGCACCTC  1089